Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000174 Prasinoderma coloniale HOM05D055643 ORTHO05D044220 6.2e-173 610.9 358 100.0
Cre12.g516250 Chlamydomonas reinhardtii HOM05D055643 ORTHO05D044220 2.4e-23 114.0 239 30.5
Pp3c19_2600 Physcomitrium patens HOM05D000371 ORTHO05D001484 3.4e-14 83.6 216 27.8
PSO210G2674 Papaver somniferum HOM05D000371 ORTHO05D001484 5.0e-13 79.7 149 32.2
Prupe.1G172600 Prunus persica HOM05D000371 ORTHO05D001484 1.1e-12 78.6 165 31.5
Ciclev10011447m.g Citrus clementina HOM05D000371 ORTHO05D001484 3.2e-12 77.0 169 32.0
SMO203G0114 Selaginella moellendorffii HOM05D000371 ORTHO05D001484 3.2e-12 77.0 158 32.3
TWI74G1305 Tripterygium wilfordii HOM05D000371 ORTHO05D001484 3.2e-12 77.0 174 29.9
TPR.G23183 Trifolium pratense HOM05D000371 ORTHO05D001484 4.2e-12 76.6 147 32.7
PSO210G1399 Papaver somniferum HOM05D000371 ORTHO05D001484 5.5e-12 76.3 149 30.9
Gohir.D09G201600 Gossypium hirsutum HOM05D000371 ORTHO05D001484 9.4e-12 75.5 157 30.6
Lalb_Chr12g0205901 Lupinus albus HOM05D000371 ORTHO05D001484 9.4e-12 75.5 165 30.9
Psat3g081840 Pisum sativum HOM05D000371 ORTHO05D001484 9.4e-12 75.5 147 31.3
Gohir.A10G130600 Gossypium hirsutum HOM05D000371 ORTHO05D001484 1.2e-11 75.1 136 30.9
Gorai.011G150600 Gossypium raimondii HOM05D000371 ORTHO05D001484 1.2e-11 75.1 136 30.9
RcHm_v2.0_Chr4g0412331 Rosa chinensis HOM05D000371 ORTHO05D001484 1.2e-11 75.1 157 29.9
Ah.13g077790 Amaranthus hybridus HOM05D000371 ORTHO05D001484 1.6e-11 74.7 157 30.6
Gohir.D10G135800 Gossypium hirsutum HOM05D000371 ORTHO05D001484 1.6e-11 74.7 136 30.9
FvH4_4g12830 Fragaria vesca HOM05D000371 ORTHO05D001484 2.1e-11 74.3 157 31.2
FAN07G0161 Fragaria x ananassa HOM05D000371 ORTHO05D001484 2.1e-11 74.3 157 31.2
FAN12G3068 Fragaria x ananassa HOM05D000371 ORTHO05D001484 2.1e-11 74.3 157 31.2
FAN17G0261 Fragaria x ananassa HOM05D000371 ORTHO05D001484 2.1e-11 74.3 157 31.2
arahy.Tifrunner.gnm1.ann1.DU5DWV Arachis hypogaea HOM05D000371 ORTHO05D001484 2.7e-11 73.9 165 30.9
Phvul.001G118200 Phaseolus vulgaris HOM05D000371 ORTHO05D001484 2.7e-11 73.9 149 32.2
Duzib151G0019 Durio zibethinus HOM05D000371 ORTHO05D001484 3.6e-11 73.6 136 31.6
CANSAT78G1440 Cannabis sativa HOM05D000371 ORTHO05D001484 4.7e-11 73.2 150 30.7
Lj4g0024760 Lotus japonicus HOM05D000371 ORTHO05D001484 4.7e-11 73.2 144 30.6
MBI04_g22009_MAGBIO Magnolia biondii HOM05D000371 ORTHO05D001484 4.7e-11 73.2 139 33.1
Lj1g0019067 Lotus japonicus HOM05D000371 ORTHO05D001484 6.1e-11 72.8 149 32.2
arahy.Tifrunner.gnm1.ann1.E1KG5K Arachis hypogaea HOM05D000371 ORTHO05D001484 7.9e-11 72.4 144 31.2
CiPaw.01G113200 Carya illinoinensis HOM05D000371 ORTHO05D001484 7.9e-11 72.4 170 28.8
COL.COLO4_35962 Corchorus olitorius HOM05D000371 ORTHO05D001484 7.9e-11 72.4 157 29.9
VMungo1383G3278 Vigna mungo HOM05D000371 ORTHO05D001484 7.9e-11 72.4 149 31.5
Gorai.006G225400 Gossypium raimondii HOM05D000371 ORTHO05D001484 1.0e-10 72.0 158 31.0
MELO3C006783.2 Cucumis melo HOM05D000371 ORTHO05D001484 1.8e-10 71.2 136 30.9
Lalb_Chr14g0365471 Lupinus albus HOM05D000371 ORTHO05D001484 2.3e-10 70.9 149 31.5
CBR_g29656 Chara braunii HOM05D000371 ORTHO05D001484 3.9e-10 70.1 144 27.1
SalBow2G2341 Salvia bowleyana HOM05D000371 ORTHO05D001484 3.9e-10 70.1 145 30.3
Ah.11g039360 Amaranthus hybridus HOM05D000371 ORTHO05D001484 5.1e-10 69.7 149 28.9
CsaV3_3G015840 Cucumis sativus L. HOM05D000371 ORTHO05D001484 5.1e-10 69.7 136 30.9
Glyma.03G122100 Glycine max HOM05D000371 ORTHO05D001484 6.7e-10 69.3 149 31.5
Ah.04g150650 Amaranthus hybridus HOM05D000371 ORTHO05D001484 1.1e-09 68.6 171 29.8
CiPaw.09G051100 Carya illinoinensis HOM05D000371 ORTHO05D001484 1.1e-09 68.6 138 34.1
PSO541G2479 Papaver somniferum HOM05D000371 ORTHO05D001484 1.1e-09 68.6 139 29.5
PSO675G5816 Papaver somniferum HOM05D000371 ORTHO05D001484 1.1e-09 68.6 139 29.5
SGA_v2.0_scaffold152G36820 Striga asiatica HOM05D000371 ORTHO05D001484 1.1e-09 68.6 111 33.3
arahy.Tifrunner.gnm1.ann1.3F3WIY Arachis hypogaea HOM05D000371 ORTHO05D001484 3.3e-09 67.0 147 27.2
CBR_g29659 Chara braunii HOM05D000371 ORTHO05D001484 3.3e-09 67.0 148 29.1
Phvul.001G029000 Phaseolus vulgaris HOM05D000371 ORTHO05D001484 7.4e-09 65.9 148 30.4
Sabra06G0022100 Salix brachista HOM05D000371 ORTHO05D001484 9.7e-09 65.5 166 33.1
CBR_g32496 Chara braunii HOM05D000371 ORTHO05D006177 1.3e-08 65.1 152 28.9
Nn8g39174 Nelumbo nucifera HOM05D000371 ORTHO05D001484 1.3e-08 65.1 125 31.2
CSS0031366 Camellia sinensis var. sinensis HOM05D000371 ORTHO05D001484 1.7e-08 64.7 149 32.9
Medtr7g053470 Medicago truncatula HOM05D000371 ORTHO05D001484 2.2e-08 64.3 150 29.3
ATR0739G132 Amborella trichopoda HOM05D000371 ORTHO05D001484 3.7e-08 63.5 165 28.5
Cre01.g047700 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D003364 3.7e-08 63.5 150 29.3
Cre02.g092250 Chlamydomonas reinhardtii HOM05D000371 ORTHO05D006062 4.8e-08 63.2 145 32.4
Manes.08G063600 Manihot esculenta HOM05D000371 ORTHO05D001484 4.8e-08 63.2 136 30.9
VMungo0647G2167 Vigna mungo HOM05D000371 ORTHO05D001484 1.1e-07 62.0 156 30.1
Glyma.14G089045 Glycine max HOM05D000371 ORTHO05D001484 1.4e-07 61.6 142 28.2
Cre09.g398067 Chlamydomonas reinhardtii HOM05D000371 ORTHO05D001484 2.4e-07 60.8 146 28.1
Medtr7g059150 Medicago truncatula HOM05D003946 ORTHO05D004485 3.1e-07 60.5 143 28.0
Hund19025 Selenicereus undatus HOM05D000371 ORTHO05D001484 3.1e-07 60.5 136 29.4
Eucgr.K01672 Eucalyptus grandis HOM05D000371 ORTHO05D001484 4.1e-07 60.1 123 29.3
Eucgr.L02444 Eucalyptus grandis HOM05D000371 ORTHO05D001484 5.3e-07 59.7 123 28.5
Glyma.17G233800 Glycine max HOM05D000371 ORTHO05D001484 9.1e-07 58.9 141 27.7
Migut.K00158 Erythranthe guttata HOM05D000371 ORTHO05D001484 1.2e-06 58.5 157 27.4
Ca_01517_v3 Cicer arietinum L. HOM05D003946 ORTHO05D004485 1.5e-06 58.2 191 23.6
Ca_01529_v3 Cicer arietinum L. HOM05D003946 ORTHO05D004485 1.5e-06 58.2 152 27.0
TPR.G23301 Trifolium pratense HOM05D003946 ORTHO05D004485 2.0e-06 57.8 152 27.0
Cre02.g092550 Chlamydomonas reinhardtii HOM05D004133 ORTHO05D004683 2.6e-06 57.4 122 31.1
Psat3g143400 Pisum sativum HOM05D003946 ORTHO05D004485 2.6e-06 57.4 143 26.6
Medtr2g090135 Medicago truncatula HOM05D003946 ORTHO05D004485 3.5e-06 57.0 152 27.0
Sed0006661 Sechium edule HOM05D000371 ORTHO05D006177 4.5e-06 56.6 152 27.6
Solyc11g011420.3 Solanum lycopersicum HOM05D000371 ORTHO05D006177 5.9e-06 56.2 123 28.5
Sopen11g006220 Solanum pennellii HOM05D000371 ORTHO05D006177 5.9e-06 56.2 123 28.5
Cfa021438 Carpinus fangiana HOM05D000371 ORTHO05D001484 7.7e-06 55.8 141 29.8
CDE02G3171 Ceratophyllum demersum HOM05D003946 ORTHO05D004485 7.7e-06 55.8 188 26.6
CDE04G0594 Ceratophyllum demersum HOM05D003946 ORTHO05D004485 7.7e-06 55.8 188 27.1
Gohir.D05G008000 Gossypium hirsutum HOM05D003946 ORTHO05D004485 7.7e-06 55.8 136 30.1
Gorai.009G008100 Gossypium raimondii HOM05D003946 ORTHO05D004485 7.7e-06 55.8 136 30.1
Lalb_Chr07g0193951 Lupinus albus HOM05D003946 ORTHO05D004485 7.7e-06 55.8 144 28.5


User provided reference genes

Program Settings