Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000145 Prasinoderma coloniale HOM05D003832 ORTHO05D004365 1.2e-119 433.3 238 100.0
MCO05G158 Micromonas commoda HOM05D003832 ORTHO05D004365 1.7e-41 173.7 213 49.3
SEGI_25137 Sequoiadendron giganteum HOM05D003832 ORTHO05D004365 1.4e-35 154.1 195 47.7
CBR_g19929 Chara braunii HOM05D003832 ORTHO05D004365 1.2e-34 151.0 206 43.7
DCAR_018031 Daucus carota HOM05D003832 ORTHO05D004365 4.4e-34 149.1 198 44.9
Prupe.1G075100 Prunus persica HOM05D003832 ORTHO05D004365 1.7e-33 147.1 194 44.8
Eucgr.E02232 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.2e-33 146.7 193 44.0
FvH4_5g15360 Fragaria vesca HOM05D003832 ORTHO05D004365 2.9e-33 146.4 195 44.1
FAN18G2818 Fragaria x ananassa HOM05D003832 ORTHO05D004365 2.9e-33 146.4 195 44.1
Eucgr.E02171 Eucalyptus grandis HOM05D003832 ORTHO05D004365 3.8e-33 146.0 193 44.0
Medtr7g086830 Medicago truncatula HOM05D003832 ORTHO05D004365 3.8e-33 146.0 195 45.6
CANSAT80G0863 Cannabis sativa HOM05D003832 ORTHO05D004365 4.9e-33 145.6 193 45.1
CANSAT80G1489 Cannabis sativa HOM05D003832 ORTHO05D004365 4.9e-33 145.6 192 44.3
Eucgr.E02911 Eucalyptus grandis HOM05D003832 ORTHO05D004365 4.9e-33 145.6 193 44.6
FAN17G1929 Fragaria x ananassa HOM05D003832 ORTHO05D004365 4.9e-33 145.6 193 45.6
Lalb_Chr13g0300001 Lupinus albus HOM05D003832 ORTHO05D004365 6.4e-33 145.2 201 44.8
Aa31LG3G7130 Aethionema arabicum HOM05D003832 ORTHO05D004365 8.4e-33 144.8 192 44.8
Lj4g0009154 Lotus japonicus HOM05D003832 ORTHO05D004365 1.1e-32 144.4 194 45.4
TWI63G0052 Tripterygium wilfordii HOM05D003832 ORTHO05D004365 1.9e-32 143.7 195 45.1
HPP92_008659 Vanilla planifolia HOM05D003832 ORTHO05D004365 1.9e-32 143.7 205 44.4
ECA234G0864 Erigeron canadensis HOM05D003832 ORTHO05D004365 2.4e-32 143.3 205 41.5
RcHm_v2.0_Chr4g0399541 Rosa chinensis HOM05D003832 ORTHO05D004365 3.2e-32 142.9 192 45.3
Glyma.13G100600 Glycine max HOM05D003832 ORTHO05D004365 5.4e-32 142.1 194 44.3
MD13G1241600 Malus domestica HOM05D003832 ORTHO05D004365 7.1e-32 141.7 221 42.1
FvH4_4g07280 Fragaria vesca HOM05D003832 ORTHO05D004365 9.2e-32 141.4 193 44.6
Phvul.003G141300 Phaseolus vulgaris HOM05D003832 ORTHO05D004365 9.2e-32 141.4 194 44.3
AL1G54750 Arabidopsis lyrata HOM05D003832 ORTHO05D004365 1.2e-31 141.0 189 46.0
Hma1.2p1_1326F.1_g275840 Hydrangea macrophylla HOM05D003832 ORTHO05D004365 1.2e-31 141.0 206 42.2
Lsat_1_v5_gn_4_41160 Lactuca sativa HOM05D003832 ORTHO05D004365 1.2e-31 141.0 199 40.7
RcHm_v2.0_Chr4g0399571 Rosa chinensis HOM05D003832 ORTHO05D004365 1.2e-31 141.0 185 45.4
Zm00001eb054120 Zea mays HOM05D003832 ORTHO05D004365 1.2e-31 141.0 199 43.2
AT1G48175 Arabidopsis thaliana HOM05D003832 ORTHO05D004365 1.6e-31 140.6 189 46.0
Potri.006G075300 Populus trichocarpa HOM05D003832 ORTHO05D004365 1.6e-31 140.6 194 45.4
PSO801G0378 Papaver somniferum HOM05D003832 ORTHO05D004365 2.1e-31 140.2 203 43.8
Manes.02G069300 Manihot esculenta HOM05D003832 ORTHO05D004365 2.7e-31 139.8 193 45.6
MSTRG.10440 Avicennia marina HOM05D003832 ORTHO05D004365 3.5e-31 139.4 197 43.1
HanXRQChr16g0514821 Helianthus annuus HOM05D003832 ORTHO05D004365 3.5e-31 139.4 220 40.5
THA.LOC104800261 Tarenaya hassleriana HOM05D003832 ORTHO05D004365 3.5e-31 139.4 206 42.7
A08p05010 Brassica napus HOM05D003832 ORTHO05D004365 4.6e-31 139.0 194 43.8
BraA08t32523Z Brassica rapa HOM05D003832 ORTHO05D004365 4.6e-31 139.0 194 43.8
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 4.6e-31 139.0 190 45.3
CsaV3_1G031890 Cucumis sativus L. HOM05D003832 ORTHO05D004365 4.6e-31 139.0 194 43.8
ECA232G4969 Erigeron canadensis HOM05D003832 ORTHO05D004365 4.6e-31 139.0 205 41.0
Thhalv10001035m.g Eutrema salsugineum HOM05D003832 ORTHO05D004365 4.6e-31 139.0 194 44.3
Thhalv10012316m.g Eutrema salsugineum HOM05D003832 ORTHO05D004365 4.6e-31 139.0 186 45.7
Lsat_1_v5_gn_5_90120 Lactuca sativa HOM05D003832 ORTHO05D004365 4.6e-31 139.0 193 43.5
Nn3g18876 Nelumbo nucifera HOM05D003832 ORTHO05D004365 4.6e-31 139.0 206 39.3
BcaB04g17461 Brassica carinata HOM05D003832 ORTHO05D004365 6.0e-31 138.7 194 43.8
BolC8t47358H Brassica oleracea HOM05D003832 ORTHO05D004365 6.0e-31 138.7 194 43.8
FAN04G3185 Fragaria x ananassa HOM05D003832 ORTHO05D004365 6.0e-31 138.7 198 43.4
Atru.chr12.1654 Acer truncatum HOM05D003832 ORTHO05D004365 1.0e-30 137.9 192 42.7
CAN.G199.14 Capsicum annuum HOM05D003832 ORTHO05D004365 1.0e-30 137.9 194 43.8
MELO3C017427.2 Cucumis melo HOM05D003832 ORTHO05D004365 1.0e-30 137.9 194 43.8
Sp1g35130 Schrenkiella parvula HOM05D003832 ORTHO05D004365 1.0e-30 137.9 197 43.7
A08p05170 Brassica napus HOM05D003832 ORTHO05D004365 1.3e-30 137.5 194 42.8
Psat3g085920 Pisum sativum HOM05D003832 ORTHO05D004365 1.3e-30 137.5 195 43.6
SMO164G0036 Selaginella moellendorffii HOM05D003832 ORTHO05D004365 1.3e-30 137.5 179 46.9
TPR.G17987 Trifolium pratense HOM05D003832 ORTHO05D004365 1.3e-30 137.5 189 45.0
Dinv41177 Davidia involucrata HOM05D003832 ORTHO05D004365 1.7e-30 137.1 191 43.5
Glyma.17G059300 Glycine max HOM05D003832 ORTHO05D004365 1.7e-30 137.1 194 43.3
Sc20g0003900 Simmondsia chinensis HOM05D003832 ORTHO05D004365 2.3e-30 136.7 192 42.7
BcaC07g37168 Brassica carinata HOM05D003832 ORTHO05D004365 3.0e-30 136.3 194 43.3
Sed0004806 Sechium edule HOM05D003832 ORTHO05D004365 3.0e-30 136.3 192 43.8
GSVIVG01010856001 Vitis vinifera HOM05D003832 ORTHO05D004365 3.9e-30 136.0 217 39.6
C08p05410 Brassica napus HOM05D003832 ORTHO05D004365 5.1e-30 135.6 194 43.3
ATR0307G033 Amborella trichopoda HOM05D003832 ORTHO05D004365 6.6e-30 135.2 192 41.1
BraA08t32534Z Brassica rapa HOM05D003832 ORTHO05D004365 6.6e-30 135.2 194 43.3
Mapoly0047s0093 Marchantia polymorpha HOM05D003832 ORTHO05D004365 6.6e-30 135.2 153 45.1
Solyc07g008650.4 Solanum lycopersicum HOM05D003832 ORTHO05D004365 6.6e-30 135.2 192 42.7
COL.COLO4_07061 Corchorus olitorius HOM05D003832 ORTHO05D004365 8.7e-30 134.8 191 45.0
CiPaw.07G197200 Carya illinoinensis HOM05D003832 ORTHO05D004365 1.1e-29 134.4 192 45.3
Pp3c14_6040 Physcomitrium patens HOM05D003832 ORTHO05D004365 1.1e-29 134.4 218 37.6
Ah.01g002650 Amaranthus hybridus HOM05D003832 ORTHO05D004365 1.5e-29 134.0 192 42.2
Sp7g33250 Schrenkiella parvula HOM05D003832 ORTHO05D004365 1.5e-29 134.0 194 43.3
Cre12.g509600 Chlamydomonas reinhardtii HOM05D003832 ORTHO05D004365 1.9e-29 133.7 100 63.0
Migut.L01881 Erythranthe guttata HOM05D003832 ORTHO05D004365 1.9e-29 133.7 205 38.5
Ciclev10009594m.g Citrus clementina HOM05D003832 ORTHO05D004365 2.5e-29 133.3 192 44.3
Oeu005620.2 Olea europaea HOM05D003832 ORTHO05D004365 2.5e-29 133.3 187 43.3
Oeu064557.2 Olea europaea HOM05D003832 ORTHO05D004365 2.5e-29 133.3 187 43.3
RcHm_v2.0_Chr7g0180711 Rosa chinensis HOM05D003832 ORTHO05D004365 2.5e-29 133.3 186 43.5
EL10Ac9g22760 Beta vulgaris HOM05D003832 ORTHO05D004365 3.3e-29 132.9 191 42.4
BcaB07g33785 Brassica carinata HOM05D003832 ORTHO05D004365 3.3e-29 132.9 189 43.4
CDE04G0848 Ceratophyllum demersum HOM05D003832 ORTHO05D004365 3.3e-29 132.9 221 40.3
Eucgr.E02915 Eucalyptus grandis HOM05D003832 ORTHO05D004365 3.3e-29 132.9 193 40.9
C06p02680 Brassica napus HOM05D003832 ORTHO05D004365 4.3e-29 132.5 194 42.8
Duzib170G0568 Durio zibethinus HOM05D003832 ORTHO05D004365 4.3e-29 132.5 193 43.5
Ah.01g002120 Amaranthus hybridus HOM05D003832 ORTHO05D004365 5.6e-29 132.1 191 41.9
Gorai.012G114300 Gossypium raimondii HOM05D003832 ORTHO05D004365 5.6e-29 132.1 194 42.3
Nitab4.5_0010556g0010 Nicotiana tabacum HOM05D003832 ORTHO05D004365 7.3e-29 131.7 204 42.2
VMungo1215G0400 Vigna mungo HOM05D003832 ORTHO05D004365 7.3e-29 131.7 184 43.5
TPR.G31075 Trifolium pratense HOM05D003832 ORTHO05D004365 1.2e-28 131.0 179 45.3
Cfa026363 Carpinus fangiana HOM05D011254 ORTHO05D013441 4.7e-28 129.0 191 40.3
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 6.2e-28 128.6 195 43.6
Aqoxy2G00660 Aquilegia oxysepala HOM05D003832 ORTHO05D004365 8.1e-28 128.3 193 40.4
BcaC08g43013 Brassica carinata HOM05D003832 ORTHO05D004365 8.1e-28 128.3 194 42.3
Sopen07g004580 Solanum pennellii HOM05D003832 ORTHO05D004365 1.1e-27 127.9 218 39.4
AUR62017542 Chenopodium quinoa HOM05D003832 ORTHO05D004365 2.4e-27 126.7 191 42.4
SalBow5G5556 Salvia bowleyana HOM05D003832 ORTHO05D004365 2.4e-27 126.7 196 41.3
VMungo1127G0216 Vigna mungo HOM05D003832 ORTHO05D004365 2.4e-27 126.7 184 42.4
Peaxi162Scf01038g00134 Petunia axillaris HOM05D003832 ORTHO05D004365 5.3e-27 125.6 192 42.2
AUR62005177 Chenopodium quinoa HOM05D003832 ORTHO05D004365 1.5e-26 124.0 212 40.1
FAN08G2334 Fragaria x ananassa HOM05D003832 ORTHO05D004365 1.5e-26 124.0 138 47.8
Rhsim01G0116900 Rhododendron simsii HOM05D003832 ORTHO05D004365 2.6e-26 123.2 279 34.4
Eucgr.E02201 Eucalyptus grandis HOM05D003832 ORTHO05D004365 7.6e-26 121.7 191 40.3
Nitab4.5_0000725g0040 Nicotiana tabacum HOM05D003832 ORTHO05D004365 7.6e-26 121.7 184 42.9
TWI34G0584 Tripterygium wilfordii HOM05D003832 ORTHO05D004365 1.3e-25 120.9 182 43.4
Aqoxy3G00356 Aquilegia oxysepala HOM05D003832 ORTHO05D004365 1.7e-25 120.6 205 36.1
TAR626G0116 Trochodendron aralioides HOM05D003832 ORTHO05D004365 1.7e-25 120.6 138 47.8
QL07p021332 Quercus lobata HOM05D003832 ORTHO05D004365 2.9e-25 119.8 151 48.3
ClCG06G013620 Citrullus lanatus HOM05D003832 ORTHO05D004365 4.9e-25 119.0 184 41.8
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 1.1e-24 117.9 143 44.8
MBI19_g45101_MAGBIO Magnolia biondii HOM05D003832 ORTHO05D004365 1.1e-24 117.9 141 44.7
unitig_8.g4676 Utricularia gibba HOM05D003832 ORTHO05D004365 1.4e-24 117.5 207 40.6
BolC6t35394H Brassica oleracea HOM05D003832 ORTHO05D004365 4.2e-24 115.9 192 40.1
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 7.8e-23 111.7 135 48.1
arahy.Tifrunner.gnm1.ann1.K6AR5W Arachis hypogaea HOM05D003832 ORTHO05D004365 1.3e-22 110.9 142 45.1
Eucgr.E02530 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.3e-22 110.9 108 50.9
arahy.Tifrunner.gnm1.ann1.S5DLTG Arachis hypogaea HOM05D003832 ORTHO05D004365 1.7e-22 110.5 142 45.1
Thecc.09G186100 Theobroma cacao HOM05D003832 ORTHO05D004365 1.5e-21 107.5 139 45.3
Cc02_g28290 Coffea canephora HOM05D003832 ORTHO05D004365 1.9e-21 107.1 137 46.0
SalBow5G0739 Salvia bowleyana HOM05D003832 ORTHO05D004365 1.9e-21 107.1 146 43.8
Sabra06G0056000 Salix brachista HOM05D003832 ORTHO05D004365 7.3e-21 105.1 237 35.4
Nitab4.5_0000617g0240 Nicotiana tabacum HOM05D003832 ORTHO05D004365 9.6e-21 104.8 219 36.5
Gohir.A04G090600 Gossypium hirsutum HOM05D003832 ORTHO05D004365 3.6e-20 102.8 134 43.3
Gohir.D04G130600 Gossypium hirsutum HOM05D003832 ORTHO05D004365 8.1e-20 101.7 135 45.2
Cc02_g28310 Coffea canephora HOM05D003832 ORTHO05D004365 4.0e-19 99.4 197 35.0
FAN22G0067 Fragaria x ananassa HOM05D003832 ORTHO05D004365 1.2e-18 97.8 125 44.8
BcaC06g35194 Brassica carinata HOM05D003832 ORTHO05D004365 2.6e-18 96.7 157 38.9
Ah.01g001730 Amaranthus hybridus HOM05D003832 ORTHO05D004365 3.4e-18 96.3 98 50.0
AUR62015080 Chenopodium quinoa HOM05D003832 ORTHO05D004365 6.4e-17 92.0 129 43.4
BolC9t57639H Brassica oleracea HOM05D003832 ORTHO05D004365 8.4e-17 91.7 161 36.6
BolC7t42388H Brassica oleracea HOM05D003832 ORTHO05D004365 4.2e-16 89.4 153 37.9
arahy.Tifrunner.gnm1.ann1.SNS3QW Arachis hypogaea HOM05D003832 ORTHO05D004365 9.3e-16 88.2 114 43.9
EL10Ac4g09383 Beta vulgaris HOM05D003832 ORTHO05D004365 9.3e-16 88.2 191 35.6
Eucgr.E02142 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.2e-15 87.8 106 44.3
SGA_v2.0_scaffold231G43408 Striga asiatica HOM05D003832 ORTHO05D004365 2.1e-15 87.0 208 33.7
EL10Ac4g09380 Beta vulgaris HOM05D003832 ORTHO05D004365 2.7e-15 86.7 191 35.1
Eucgr.E02102 Eucalyptus grandis HOM05D003832 ORTHO05D004365 6.0e-15 85.5 132 39.4
CARHR289090 Cardamine hirsuta HOM05D003832 ORTHO05D004365 1.3e-14 84.3 89 48.3
Eucgr.E02551 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.3e-14 84.3 80 52.5
Haze_22022 Corylus avellana HOM05D003832 ORTHO05D004365 1.8e-14 84.0 102 48.0
SGA_v2.0_scaffold14G07081 Striga asiatica HOM05D003832 ORTHO05D004365 3.0e-14 83.2 209 34.0
Haze_26440 Corylus avellana HOM05D003832 ORTHO05D004365 4.8e-12 75.9 183 30.1
A05p26850 Brassica napus HOM05D003832 ORTHO05D004365 8.1e-12 75.1 100 42.0
A07p42340 Brassica napus HOM05D003832 ORTHO05D004365 2.4e-11 73.6 98 41.8
Eucgr.E02175 Eucalyptus grandis HOM05D003832 ORTHO05D004365 3.1e-11 73.2 90 41.1
C07p18790 Brassica napus HOM05D003832 ORTHO05D004365 6.9e-11 72.0 96 42.7
AUR62000790 Chenopodium quinoa HOM05D003832 ORTHO05D004365 6.9e-11 72.0 212 30.7
CDE07G0789 Ceratophyllum demersum HOM05D001368 ORTHO05D003846 9.0e-11 71.6 75 50.7
C09p47960 Brassica napus HOM05D003832 ORTHO05D004365 2.6e-10 70.1 52 57.7
BraA05t20080Z Brassica rapa HOM05D003832 ORTHO05D004365 5.8e-10 68.9 52 57.7
BraA05t21564Z Brassica rapa HOM05D003832 ORTHO05D004365 5.8e-10 68.9 52 57.7
PRCOL_00006665 Prasinoderma coloniale HOM05D005486 ORTHO05D007411 5.8e-10 68.9 216 34.3
PSO832G0096 Papaver somniferum HOM05D003832 ORTHO05D004365 1.0e-09 68.2 42 71.4
Eucgr.E02291 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.7e-09 67.4 147 34.7
Haze_27655 Corylus avellana HOM05D005486 ORTHO05D003297 6.4e-09 65.5 179 30.2
AagrBONN_evm.TU.Sc2ySwM_228.1832 Anthoceros agrestis HOM05D003832 ORTHO05D004365 1.1e-08 64.7 215 28.8
Lj5A749G38 Lonicera japonica HOM05D003832 ORTHO05D004365 1.1e-08 64.7 113 38.9
BcaC06g36546 Brassica carinata HOM05D003832 ORTHO05D004365 1.4e-08 64.3 186 31.2
MD16G1248500 Malus domestica HOM05D003832 ORTHO05D004365 2.5e-08 63.5 72 44.4
PGSC0003DMG400022976 Solanum tuberosum HOM05D003832 ORTHO05D004365 1.2e-07 61.2 200 33.5
TAR629G0806 Trochodendron aralioides HOM05D005486 ORTHO05D007411 2.1e-07 60.5 213 28.6
EL10Ac4g09389 Beta vulgaris HOM05D003832 ORTHO05D004365 3.5e-07 59.7 84 40.5
THA.LOC104808436 Tarenaya hassleriana HOM05D005486 ORTHO05D007411 1.8e-06 57.4 151 33.1
EL10Ac6g14546 Beta vulgaris HOM05D005486 ORTHO05D007411 3.0e-06 56.6 192 30.7
ATR0618G023 Amborella trichopoda HOM05D005486 ORTHO05D007411 3.9e-06 56.2 214 27.6
Cc11_g10960 Coffea canephora HOM05D005486 ORTHO05D007411 3.9e-06 56.2 152 32.2
Ciclev10030527m.g Citrus clementina HOM05D005486 ORTHO05D007411 5.1e-06 55.8 196 29.6
SEGI_38327 Sequoiadendron giganteum HOM05D005486 ORTHO05D007411 5.1e-06 55.8 179 29.6
Thecc.02G364500 Theobroma cacao HOM05D005486 ORTHO05D007411 5.1e-06 55.8 227 27.3
Zm00001eb382160 Zea mays HOM05D005486 ORTHO05D007411 5.1e-06 55.8 145 32.4
CARHR061530 Cardamine hirsuta HOM05D005486 ORTHO05D007411 6.7e-06 55.5 151 31.8
TAR622G0197 Trochodendron aralioides HOM05D005486 ORTHO05D007411 6.7e-06 55.5 210 27.1
Carub.0002s1526 Capsella rubella HOM05D005486 ORTHO05D007411 8.7e-06 55.1 138 31.9
CAN.G184.62 Capsicum annuum HOM05D005486 ORTHO05D007411 8.7e-06 55.1 161 31.7
Thhalv10018020m.g Eutrema salsugineum HOM05D005486 ORTHO05D007411 8.7e-06 55.1 161 32.3
Oeu056581.1 Olea europaea HOM05D005486 ORTHO05D007411 8.7e-06 55.1 151 31.8


User provided reference genes

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