Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 3.1e-204 714.9 364 100.0
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.3e-97 359.0 347 56.2
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 7.5e-33 145.6 348 33.9
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 2.2e-32 144.1 350 32.0
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 6.3e-32 142.5 349 31.8
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 2.4e-31 140.6 333 32.4
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 5.4e-31 139.4 331 32.6
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 5.4e-31 139.4 332 31.9
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 7.0e-31 139.0 333 32.7
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 7.0e-31 139.0 335 33.1
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 7.0e-31 139.0 328 31.7
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 9.2e-31 138.7 331 31.4
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 1.6e-30 137.9 334 32.3
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 1.6e-30 137.9 333 32.1
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 4.6e-30 136.3 332 33.7
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 5.9e-30 136.0 350 32.0
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 7.8e-30 135.6 361 30.2
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 1.0e-29 135.2 350 32.0
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.0e-29 135.2 361 30.2
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.3e-29 134.8 338 32.2
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.7e-29 134.4 348 31.9
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.7e-29 134.4 346 31.5
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 2.3e-29 134.0 345 30.4
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 2.3e-29 134.0 335 31.3
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 2.3e-29 134.0 352 30.7
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 2.3e-29 134.0 333 33.0
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 3.9e-29 133.3 353 32.0
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 3.9e-29 133.3 345 30.4
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 3.9e-29 133.3 351 31.1
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 3.9e-29 133.3 333 30.9
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 5.0e-29 132.9 335 30.7
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 6.6e-29 132.5 357 30.3
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 6.6e-29 132.5 346 31.8
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 8.6e-29 132.1 335 31.6
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 1.1e-28 131.7 335 31.9
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-28 131.7 349 31.2
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 1.5e-28 131.3 331 33.2
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 1.9e-28 131.0 343 32.1
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 1.9e-28 131.0 343 32.1
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 2.5e-28 130.6 355 31.8
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 2.5e-28 130.6 355 31.8
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 3.3e-28 130.2 348 32.5
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 3.3e-28 130.2 355 31.5
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 3.3e-28 130.2 333 31.5
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 3.3e-28 130.2 350 30.9
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 3.3e-28 130.2 352 31.0
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 3.3e-28 130.2 299 31.8
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 5.6e-28 129.4 338 31.7
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 7.3e-28 129.0 355 31.5
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 7.3e-28 129.0 355 31.5
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 7.3e-28 129.0 338 29.6
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 9.5e-28 128.6 348 32.2
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 9.5e-28 128.6 350 30.0
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 9.5e-28 128.6 336 32.7
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.2e-27 128.3 330 30.6
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-27 128.3 333 30.9
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.2e-27 128.3 335 30.4
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-27 128.3 348 31.3
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 1.2e-27 128.3 336 32.1
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 1.6e-27 127.9 349 29.5
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 1.6e-27 127.9 335 30.7
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 1.6e-27 127.9 333 31.5
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 1.6e-27 127.9 333 30.9
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 1.6e-27 127.9 330 31.2
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 2.1e-27 127.5 340 30.6
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 2.1e-27 127.5 335 31.3
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.8e-27 127.1 349 30.4
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.8e-27 127.1 346 31.5
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 3.6e-27 126.7 331 32.3
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 4.7e-27 126.3 353 32.0
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 4.7e-27 126.3 339 32.2
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 6.1e-27 125.9 347 29.4
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 8.0e-27 125.6 337 29.7
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 8.0e-27 125.6 333 32.4
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 8.0e-27 125.6 337 31.5
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 8.0e-27 125.6 350 31.1
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.0e-26 125.2 336 30.1
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 1.0e-26 125.2 348 30.7
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 1.4e-26 124.8 353 30.9
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.4e-26 124.8 351 31.6
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 2.3e-26 124.0 358 28.8
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 3.1e-26 123.6 332 31.3
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 3.1e-26 123.6 355 30.7
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 4.0e-26 123.2 331 32.0
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 4.0e-26 123.2 355 31.0
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 4.0e-26 123.2 355 31.5
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 6.8e-26 122.5 250 35.6
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 6.8e-26 122.5 354 29.9
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 6.8e-26 122.5 328 31.4
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 6.8e-26 122.5 338 29.3
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.2e-25 121.7 359 28.4
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 2.0e-25 120.9 328 28.7
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 2.0e-25 120.9 333 29.7
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 2.6e-25 120.6 350 30.6
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.6e-25 120.6 347 29.7
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-25 120.2 324 30.6
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 4.4e-25 119.8 327 30.9
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 4.4e-25 119.8 353 28.9
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 4.4e-25 119.8 348 28.2
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 5.8e-25 119.4 340 29.4
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 1.3e-24 118.2 277 31.8
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-24 118.2 352 29.5
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.7e-24 117.9 330 28.8
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.2e-24 117.5 348 29.0
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 3.7e-24 116.7 337 29.4
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 4.9e-24 116.3 338 28.4
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 6.4e-24 115.9 350 28.0
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 6.4e-24 115.9 362 28.5
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 6.4e-24 115.9 367 28.9
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 8.3e-24 115.5 350 28.3
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.4e-23 114.8 261 31.0
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 1.9e-23 114.4 404 28.0
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-23 114.4 362 29.0
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 5.4e-23 112.8 278 32.7
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 5.4e-23 112.8 266 30.5
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 7.0e-23 112.5 367 28.6
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 9.2e-23 112.1 362 28.2
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 9.2e-23 112.1 324 29.3
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-22 111.3 223 36.3
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 6.0e-22 109.4 345 28.7
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 7.8e-22 109.0 346 27.7
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 1.3e-21 108.2 362 26.8
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 5.0e-21 106.3 329 27.4
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 3.3e-20 103.6 349 25.5
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.2e-19 101.7 230 32.6
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 1.6e-19 101.3 255 28.6
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 2.8e-19 100.5 356 30.6
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 4.7e-19 99.8 289 29.1
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.4e-18 98.2 358 27.1
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.3e-18 97.4 337 27.0
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 1.2e-17 95.1 334 28.1
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 1.7e-16 91.3 216 31.9
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 4.9e-16 89.7 337 27.3
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 6.4e-16 89.4 346 25.4
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 4.1e-15 86.7 352 25.9
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.2e-14 85.1 357 26.6
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.8e-11 73.9 248 30.6
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 2.6e-09 67.4 229 28.4
PRCOL_00002754 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 4.4e-09 66.6 168 29.8
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 9.9e-09 65.5 159 32.1
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-08 65.1 199 26.1
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 2.2e-08 64.3 105 37.1
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 4.9e-08 63.2 185 24.9
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 6.4e-08 62.8 97 35.1


User provided reference genes

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