Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 1.4e-156 556.6 354 100.0
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 2.8e-08 63.9 120 35.0
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 1.4e-07 61.6 248 27.8
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 1.8e-07 61.2 162 34.0
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 1.8e-07 61.2 141 34.8
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 2.4e-07 60.8 142 34.5
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 4.0e-07 60.1 134 36.6
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 4.0e-07 60.1 134 36.6
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 4.0e-07 60.1 139 36.0
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 4.0e-07 60.1 139 36.0
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 4.0e-07 60.1 136 35.3
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 4.0e-07 60.1 139 36.0
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 5.3e-07 59.7 138 36.2
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 5.3e-07 59.7 138 36.2
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 5.3e-07 59.7 161 31.7
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 6.9e-07 59.3 137 37.2
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 9.0e-07 58.9 138 36.2
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 9.0e-07 58.9 138 35.5
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 1.2e-06 58.5 135 35.6
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 1.2e-06 58.5 136 35.3
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.5e-06 58.2 160 32.5
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 1.5e-06 58.2 135 33.3
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.5e-06 58.2 134 35.8
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 1.5e-06 58.2 138 34.8
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.5e-06 58.2 142 35.2
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 2.0e-06 57.8 160 31.9
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 2.6e-06 57.4 138 35.5
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 2.6e-06 57.4 160 33.1
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.6e-06 57.4 138 36.2
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 3.4e-06 57.0 136 33.8
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 3.4e-06 57.0 135 35.6
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 3.4e-06 57.0 148 31.8
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 4.5e-06 56.6 161 31.7
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 4.5e-06 56.6 138 34.1
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 4.5e-06 56.6 137 35.0
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 4.5e-06 56.6 138 35.5
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 4.5e-06 56.6 160 30.0
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 5.8e-06 56.2 138 34.1
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 5.8e-06 56.2 140 35.0
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 5.8e-06 56.2 138 35.5
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 5.8e-06 56.2 137 35.0
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 5.8e-06 56.2 138 34.8
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 5.8e-06 56.2 143 32.2
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 5.8e-06 56.2 138 34.8
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 5.8e-06 56.2 164 31.1
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 5.8e-06 56.2 138 33.3
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 7.6e-06 55.8 135 34.8
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 7.6e-06 55.8 135 34.8
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 7.6e-06 55.8 135 34.8
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 7.6e-06 55.8 153 34.0
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 7.6e-06 55.8 138 34.1
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 7.6e-06 55.8 138 36.2
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 7.6e-06 55.8 135 32.6
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 7.6e-06 55.8 161 31.7
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 7.6e-06 55.8 138 33.3
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 7.6e-06 55.8 138 32.6
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 7.6e-06 55.8 148 31.1
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 9.9e-06 55.5 148 33.1
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 9.9e-06 55.5 138 34.8
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 9.9e-06 55.5 138 34.1
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 9.9e-06 55.5 138 34.1
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 9.9e-06 55.5 165 30.3
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 9.9e-06 55.5 165 30.3
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 9.9e-06 55.5 141 34.0
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 9.9e-06 55.5 136 34.6
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 9.9e-06 55.5 138 34.1
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 9.9e-06 55.5 138 35.5


User provided reference genes

Program Settings