Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG403018402 Solanum tuberosum HOM05D001046 ORTHO05D007174 1.7e-54 215.7 103 100.0
CAN.G1298.31 Capsicum annuum HOM05D001046 ORTHO05D007174 1.0e-11 73.6 48 77.1
Peaxi162Scf00159g01020 Petunia axillaris HOM05D001046 ORTHO05D007174 1.0e-11 73.6 48 77.1
Solyc05g007990.4 Solanum lycopersicum HOM05D001046 ORTHO05D007174 1.0e-11 73.6 48 77.1
Sopen05g003840 Solanum pennellii HOM05D001046 ORTHO05D007174 1.0e-11 73.6 48 77.1
MSTRG.13593 Avicennia marina HOM05D001046 ORTHO05D007174 3.0e-11 72.0 48 75.0
ClCG11G001250 Citrullus lanatus HOM05D001046 ORTHO05D007174 3.0e-11 72.0 48 75.0
MELO3C018345.2 Cucumis melo HOM05D001046 ORTHO05D007174 3.0e-11 72.0 48 75.0
CsaV3_5G013320 Cucumis sativus L. HOM05D001046 ORTHO05D007174 3.0e-11 72.0 48 75.0
Lj6A745T54 Lonicera japonica HOM05D001046 ORTHO05D007174 3.0e-11 72.0 48 75.0
Oeu063607.3 Olea europaea HOM05D001046 ORTHO05D007174 3.0e-11 72.0 48 75.0
QL01p001482 Quercus lobata HOM05D001046 ORTHO05D007174 3.0e-11 72.0 48 75.0
Sed0013317 Sechium edule HOM05D001046 ORTHO05D007174 3.0e-11 72.0 48 75.0
Potri.008G130200 Populus trichocarpa HOM05D001046 ORTHO05D007174 5.1e-11 71.2 48 72.9
Atru.chr11.504 Acer truncatum HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Aqoxy3G00111 Aquilegia oxysepala HOM05D001046 ORTHO05D007174 8.7e-11 70.5 46 76.1
CANSAT64G0447 Cannabis sativa HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Cpa.g.sc65.149 Carica papaya HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Cfa008619 Carpinus fangiana HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Cc11_g08540 Coffea canephora HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
COL.COLO4_13162 Corchorus olitorius HOM05D001046 ORTHO05D007174 8.7e-11 70.5 46 76.1
Haze_10990 Corylus avellana HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Migut.E00432 Erythranthe guttata HOM05D001046 ORTHO05D007174 8.7e-11 70.5 50 72.0
Lalb_Chr09g0328541 Lupinus albus HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Lalb_Chr16g0385001 Lupinus albus HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
MD13G1024500 Malus domestica HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
MD16G1027200 Malus domestica HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Manes.15G128300 Manihot esculenta HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Nn4g24188 Nelumbo nucifera HOM05D001046 ORTHO05D007174 8.7e-11 70.5 46 76.1
Prupe.1G326000 Prunus persica HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Sc04g0005400 Simmondsia chinensis HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
THA.LOC104824139 Tarenaya hassleriana HOM05D001046 ORTHO05D007174 8.7e-11 70.5 48 72.9
Thecc.02G282700 Theobroma cacao HOM05D001046 ORTHO05D007174 8.7e-11 70.5 46 76.1
DCAR_030226 Daucus carota HOM05D001046 ORTHO05D007174 1.1e-10 70.1 48 72.9
TWI75G1880 Tripterygium wilfordii HOM05D001046 ORTHO05D007174 1.1e-10 70.1 48 72.9
Actinidia18443 Actinidia chinensis HOM05D001046 ORTHO05D007174 1.5e-10 69.7 48 70.8
Ciclev10014169m.g Citrus clementina HOM05D001046 ORTHO05D007174 1.5e-10 69.7 48 70.8
Dinv14424 Davidia involucrata HOM05D001046 ORTHO05D007174 1.5e-10 69.7 48 70.8
Potri.010G111900 Populus trichocarpa HOM05D001046 ORTHO05D007174 1.5e-10 69.7 48 72.9
Ca_18737_v3 Cicer arietinum L. HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
FvH4_4g32570 Fragaria vesca HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
FAN07G0377 Fragaria x ananassa HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
FAN12G0077 Fragaria x ananassa HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
Glyma.20G017000 Glycine max HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
Gohir.A03G120500 Gossypium hirsutum HOM05D001046 ORTHO05D007174 1.9e-10 69.3 46 73.9
Gohir.D02G143700 Gossypium hirsutum HOM05D001046 ORTHO05D007174 1.9e-10 69.3 46 73.9
Gorai.005G161200 Gossypium raimondii HOM05D001046 ORTHO05D007174 1.9e-10 69.3 46 73.9
Medtr4g084660 Medicago truncatula HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
Phvul.002G095000 Phaseolus vulgaris HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
Psat7g128600 Pisum sativum HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
RcHm_v2.0_Chr4g0441441 Rosa chinensis HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
TPR.G38296 Trifolium pratense HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
TWI31G0274 Tripterygium wilfordii HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
GSVIVG01011746001 Vitis vinifera HOM05D001046 ORTHO05D007174 1.9e-10 69.3 48 70.8
Aa31LG2G8470 Aethionema arabicum HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
ATR1102G048 Amborella trichopoda HOM05D001046 ORTHO05D007174 2.5e-10 68.9 50 66.0
AT2G01460 Arabidopsis thaliana HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
arahy.Tifrunner.gnm1.ann1.3TS05T Arachis hypogaea HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 70.8
arahy.Tifrunner.gnm1.ann1.R35CQ9 Arachis hypogaea HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 70.8
BcaB07g30397 Brassica carinata HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
BcaC03g17041 Brassica carinata HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
C02p49560 Brassica napus HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
BolC2t11035H Brassica oleracea HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
Carub.0005s0042 Capsella rubella HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
CARHR143980 Cardamine hirsuta HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
Thhalv10000761m.g Eutrema salsugineum HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
FAN17G1443 Fragaria x ananassa HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 70.8
Lsat_1_v5_gn_4_13960 Lactuca sativa HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 70.8
Sp2g12910 Schrenkiella parvula HOM05D001046 ORTHO05D007174 2.5e-10 68.9 48 68.8
EL10Ac1g02062 Beta vulgaris HOM05D001046 ORTHO05D007174 3.3e-10 68.6 48 70.8
A02p31990 Brassica napus HOM05D001046 ORTHO05D007174 3.3e-10 68.6 48 66.7
BraA02t08210Z Brassica rapa HOM05D001046 ORTHO05D007174 3.3e-10 68.6 48 66.7
CiPaw.05G250600 Carya illinoinensis HOM05D001046 ORTHO05D007174 3.3e-10 68.6 48 68.8
SGA_v2.0_scaffold257G45685 Striga asiatica HOM05D001046 ORTHO05D007174 3.3e-10 68.6 43 76.7
TAR622G0350 Trochodendron aralioides HOM05D001046 ORTHO05D007174 3.3e-10 68.6 46 73.9
TAR622G0834 Trochodendron aralioides HOM05D001046 ORTHO05D007174 3.3e-10 68.6 46 73.9
CSS0048168 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D007174 4.3e-10 68.2 48 68.8
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 4.3e-10 68.2 42 76.2
Glyma.07G218600 Glycine max HOM05D001046 ORTHO05D007174 5.6e-10 67.8 48 68.8
HanXRQChr17g0566901 Helianthus annuus HOM05D001046 ORTHO05D007174 5.6e-10 67.8 48 68.8
SEGI_20016 Sequoiadendron giganteum HOM05D001046 ORTHO05D007174 5.6e-10 67.8 50 66.0
Eucgr.G02183 Eucalyptus grandis HOM05D001046 ORTHO05D007174 7.3e-10 67.4 48 66.7
Lsat_1_v5_gn_3_110280 Lactuca sativa HOM05D001046 ORTHO05D007174 9.6e-10 67.0 44 72.7
Os04g0280200 Oryza sativa ssp. japonica HOM05D001046 ORTHO05D007174 9.6e-10 67.0 50 68.0
PGR119G0737 Punica granatum HOM05D001046 ORTHO05D007174 9.6e-10 67.0 48 68.8
SalBow8G1368 Salvia bowleyana HOM05D001046 ORTHO05D007174 1.3e-09 66.6 48 68.8
SalBow8G3528 Salvia bowleyana HOM05D001046 ORTHO05D007174 1.3e-09 66.6 48 68.8
HPP92_023398 Vanilla planifolia HOM05D001046 ORTHO05D007174 1.3e-09 66.6 46 69.6
PSO478G0704 Papaver somniferum HOM05D001046 ORTHO05D007174 1.6e-09 66.2 46 69.6
Zm00001eb420350 Zea mays HOM05D001046 ORTHO05D007174 1.6e-09 66.2 46 71.7
Duzib251G0115 Durio zibethinus HOM05D001046 ORTHO05D007174 2.1e-09 65.9 46 71.7
Duzib268G1566 Durio zibethinus HOM05D001046 ORTHO05D007174 2.1e-09 65.9 37 83.8
ECA234G2117 Erigeron canadensis HOM05D001046 ORTHO05D007174 2.8e-09 65.5 48 66.7
VMungo0251G1068 Vigna mungo HOM05D001046 ORTHO05D007174 1.1e-08 63.5 36 83.3
AagrBONN_evm.TU.Sc2ySwM_228.2448 Anthoceros agrestis HOM05D001046 ORTHO05D007174 1.4e-08 63.2 69 52.2
CSS0021601 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D007174 1.4e-08 63.2 37 78.4
Lj4g0011214 Lotus japonicus HOM05D001046 ORTHO05D007174 1.4e-08 63.2 36 83.3
Pp3c20_690 Physcomitrium patens HOM05D001046 ORTHO05D007174 1.4e-08 63.2 50 62.0
Rhsim09G0066100 Rhododendron simsii HOM05D001046 ORTHO05D007174 1.8e-08 62.8 36 83.3
vmacro00411 Vaccinium macrocarpon HOM05D001046 ORTHO05D007174 1.8e-08 62.8 36 83.3
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 4.0e-08 61.6 49 65.3
AUR62002755 Chenopodium quinoa HOM05D001046 ORTHO05D007174 6.9e-08 60.8 36 80.6
AUR62014179 Chenopodium quinoa HOM05D001046 ORTHO05D007174 6.9e-08 60.8 36 80.6
Mapoly0011s0131 Marchantia polymorpha HOM05D001046 ORTHO05D007174 9.0e-08 60.5 46 60.9


User provided reference genes

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