Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 1.7e-300 1035.4 558 100.0
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 2.7e-261 905.2 546 91.6
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 4.0e-249 864.8 556 87.4
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 4.4e-195 685.3 544 70.8
Nitab4.5_0005017g0030 Nicotiana tabacum HOM05D021138 ORTHO05D009211 4.7e-181 638.6 519 68.6
Peaxi162Scf00069g01735 Petunia axillaris HOM05D021138 ORTHO05D009211 3.0e-159 566.2 526 63.1
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 1.5e-49 201.8 563 33.7
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 5.4e-36 156.8 562 32.0
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 2.3e-34 151.4 509 32.4
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 8.1e-32 142.9 501 31.3
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 9.9e-30 136.0 585 31.3
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 3.8e-29 134.0 604 31.0
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 4.9e-29 133.7 537 28.9
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 4.9e-29 133.7 524 29.0
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 3.2e-28 131.0 475 30.3
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 3.2e-28 131.0 490 28.8
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 2.1e-27 128.3 603 29.4
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 1.3e-26 125.6 559 29.2
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 1.7e-26 125.2 531 29.8
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 2.3e-26 124.8 593 29.2
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.1e-25 122.5 531 29.4
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 1.5e-25 122.1 606 29.9
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 9.6e-25 119.4 630 29.0
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 3.6e-24 117.5 424 29.5
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 4.8e-24 117.1 696 27.0
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 4.8e-24 117.1 596 29.9
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 6.2e-24 116.7 585 29.6
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 4.0e-23 114.0 579 27.3
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 4.0e-23 114.0 595 27.1
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 5.3e-23 113.6 595 28.6
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 4.5e-22 110.5 669 28.3
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 7.6e-22 109.8 653 26.6
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 2.2e-21 108.2 421 31.6
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 6.4e-21 106.7 615 27.6
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 2.4e-20 104.8 608 27.8
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 3.2e-20 104.4 585 27.4
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 4.2e-20 104.0 546 26.0
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 4.2e-20 104.0 421 28.7
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 1.6e-19 102.1 579 28.2
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 3.5e-19 100.9 632 29.6
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 4.6e-19 100.5 544 28.3
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 6.0e-19 100.1 406 28.6
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 7.9e-19 99.8 544 28.7
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.3e-18 99.0 582 28.4
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 3.9e-18 97.4 390 29.5
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 8.7e-18 96.3 488 27.5
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 4.3e-17 94.0 476 27.9
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 4.3e-17 94.0 539 26.9
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 1.6e-16 92.0 563 26.5
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 1.6e-16 92.0 492 26.4
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 8.1e-16 89.7 569 28.3
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 1.8e-15 88.6 684 26.2
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 1.8e-15 88.6 516 27.9
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 2.4e-15 88.2 650 25.7
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 4.0e-15 87.4 588 29.9
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 4.0e-15 87.4 392 27.0
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 9.0e-15 86.3 426 28.2
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 1.2e-14 85.9 653 26.0
Ah.06g184550 Amaranthus hybridus HOM05D007892 ORTHO05D009211 4.5e-14 84.0 457 26.9
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 4.5e-14 84.0 299 30.8
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 7.6e-14 83.2 698 24.1
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 7.6e-14 83.2 560 26.6
EL10Ac4g08232 Beta vulgaris HOM05D007892 ORTHO05D009211 1.3e-13 82.4 429 27.7
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 1.9e-12 78.6 580 25.3
MELO3C025606.2 Cucumis melo HOM05D007892 ORTHO05D009211 4.2e-12 77.4 576 26.7
ATR0150G007 Amborella trichopoda HOM05D007892 ORTHO05D009211 1.2e-11 75.9 485 26.0
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 1.6e-11 75.5 310 26.8
BcaC03g14367 Brassica carinata HOM05D012500 ORTHO05D009211 2.1e-11 75.1 274 29.6
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 3.5e-11 74.3 660 26.2
Os07g0107900 Oryza sativa ssp. japonica HOM05D061528 ORTHO05D009211 7.9e-11 73.2 319 30.7
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 1.0e-10 72.8 585 25.3
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.0e-10 72.8 443 26.4
PSO541G2379 Papaver somniferum HOM05D056025 ORTHO05D009211 2.3e-10 71.6 65 58.5
PSO675G5502 Papaver somniferum HOM05D056025 ORTHO05D009211 3.9e-10 70.9 65 58.5
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 3.9e-10 70.9 70 55.7
A02p10690 Brassica napus HOM05D012500 ORTHO05D009211 5.1e-10 70.5 271 30.3
C02p17810 Brassica napus HOM05D012500 ORTHO05D009211 5.1e-10 70.5 296 29.4
Oeu051084.1 Olea europaea HOM05D007892 ORTHO05D009211 5.1e-10 70.5 214 25.7
BolC2t07910H Brassica oleracea HOM05D012500 ORTHO05D009211 6.7e-10 70.1 354 27.4
Carub.0008s1424 Capsella rubella HOM05D012500 ORTHO05D009211 6.7e-10 70.1 326 28.2
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.5e-09 68.9 599 29.2
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 1.5e-09 68.9 560 27.7
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 1.9e-09 68.6 434 25.6
CDE05G2993 Ceratophyllum demersum HOM05D007892 ORTHO05D009211 9.6e-09 66.2 57 61.4
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 1.6e-08 65.5 516 24.2
AL8G29040 Arabidopsis lyrata HOM05D012500 ORTHO05D009211 2.1e-08 65.1 315 30.8
Migut.M00782 Erythranthe guttata HOM05D007892 ORTHO05D009211 2.1e-08 65.1 563 25.8
BraA02t06132Z Brassica rapa HOM05D012500 ORTHO05D009211 4.8e-08 63.9 395 25.8
unitig_37.g12567 Utricularia gibba HOM05D007892 ORTHO05D009211 6.3e-08 63.5 496 23.0
Zm00001eb298400 Zea mays HOM05D061528 ORTHO05D009211 1.1e-07 62.8 345 25.2
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 1.8e-07 62.0 104 38.5
AT5G53930 Arabidopsis thaliana HOM05D012500 ORTHO05D009211 2.4e-07 61.6 286 28.7
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 6.9e-07 60.1 585 25.8
BcaB05g22092 Brassica carinata HOM05D012500 ORTHO05D009211 2.0e-06 58.5 300 26.0
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 7.6e-06 56.6 52 57.7


User provided reference genes

Program Settings