Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG403003154 Solanum tuberosum HOM05D001992 ORTHO05D002199 1.7e-41 172.6 107 100.0
Solyc03g097020.4 Solanum lycopersicum HOM05D001992 ORTHO05D002199 4.3e-37 157.9 104 88.5
Sopen03g027770 Solanum pennellii HOM05D001992 ORTHO05D002199 1.4e-35 152.9 104 93.3
Nitab4.5_0011186g0010 Nicotiana tabacum HOM05D001992 ORTHO05D002199 2.8e-28 128.6 106 73.6
Peaxi162Scf00745g00849 Petunia axillaris HOM05D001992 ORTHO05D002199 1.4e-24 116.3 107 79.4
Actinidia08744 Actinidia chinensis HOM05D001992 ORTHO05D002199 1.6e-20 102.8 104 56.7
Migut.F00947 Erythranthe guttata HOM05D001992 ORTHO05D002199 4.8e-20 101.3 103 55.3
Nitab4.5_0017702g0010 Nicotiana tabacum HOM05D001992 ORTHO05D002199 4.8e-20 101.3 111 71.2
SGA_v2.0_scaffold59G20766 Striga asiatica HOM05D001992 ORTHO05D002199 4.8e-20 101.3 103 57.3
Actinidia18706 Actinidia chinensis HOM05D001992 ORTHO05D002199 1.4e-19 99.8 104 58.7
MSTRG.8574 Avicennia marina HOM05D001992 ORTHO05D002199 1.8e-19 99.4 103 61.2
Hma1.2p1_1680F.1_g297190 Hydrangea macrophylla HOM05D001992 ORTHO05D002199 2.4e-19 99.0 103 68.9
Actinidia34307 Actinidia chinensis HOM05D001992 ORTHO05D002199 5.3e-19 97.8 104 54.8
Oeu062815.1 Olea europaea HOM05D001992 ORTHO05D002199 6.9e-19 97.4 103 58.3
vmacro22174 Vaccinium macrocarpon HOM05D001992 ORTHO05D002199 9.0e-19 97.1 103 55.3
Rhsim03G0221500 Rhododendron simsii HOM05D001992 ORTHO05D002199 2.0e-18 95.9 106 51.9
Migut.F00096 Erythranthe guttata HOM05D001992 ORTHO05D002199 2.6e-18 95.5 104 57.7
Cc00_g28880 Coffea canephora HOM05D001992 ORTHO05D002199 5.8e-18 94.4 98 70.4
GSVIVG01024407001 Vitis vinifera HOM05D001992 ORTHO05D002199 9.9e-18 93.6 103 54.4
Rhsim09G0212800 Rhododendron simsii HOM05D001992 ORTHO05D002199 1.3e-17 93.2 105 68.6
CSS0028493 Camellia sinensis var. sinensis HOM05D001992 ORTHO05D002199 4.9e-17 91.3 111 59.5
Nn3g19355 Nelumbo nucifera HOM05D001992 ORTHO05D002199 4.9e-17 91.3 103 51.5
SGA_v2.0_scaffold50G18441 Striga asiatica HOM05D001992 ORTHO05D002199 4.9e-17 91.3 103 56.3
DCAR_009012 Daucus carota HOM05D001992 ORTHO05D002199 8.4e-17 90.5 99 56.6
CiPaw.06G032700 Carya illinoinensis HOM05D001992 ORTHO05D002199 1.9e-16 89.4 110 50.9
TAR375G0021 Trochodendron aralioides HOM05D001992 ORTHO05D002199 2.4e-16 89.0 105 64.8
QL09p023805 Quercus lobata HOM05D001992 ORTHO05D002199 3.2e-16 88.6 108 61.1
EL10Ac3g05076 Beta vulgaris HOM05D001992 ORTHO05D002199 4.2e-16 88.2 104 57.7
Nn1g01899 Nelumbo nucifera HOM05D001992 ORTHO05D002199 5.5e-16 87.8 104 52.9
SGA_v2.0_scaffold18G08510 Striga asiatica HOM05D001992 ORTHO05D002199 5.5e-16 87.8 103 59.2
Sc19g0000170 Simmondsia chinensis HOM05D001992 ORTHO05D002199 7.1e-16 87.4 110 52.7
PGR042G2039 Punica granatum HOM05D001992 ORTHO05D002199 1.6e-15 86.3 108 63.9
SalBow2G0164 Salvia bowleyana HOM05D001992 ORTHO05D002199 1.6e-15 86.3 103 50.5
ClCG02G007670 Citrullus lanatus HOM05D001992 ORTHO05D002199 2.1e-15 85.9 107 49.5
PSO063G3363 Papaver somniferum HOM05D001992 ORTHO05D002199 2.7e-15 85.5 103 63.1
CAN.G1131.12 Capsicum annuum HOM05D001992 ORTHO05D002199 4.6e-15 84.7 45 91.1
PSO633G0001 Papaver somniferum HOM05D001992 ORTHO05D002199 1.0e-14 83.6 104 61.5
PSO782G2281 Papaver somniferum HOM05D001992 ORTHO05D002199 1.0e-14 83.6 104 61.5
PSO782G4540 Papaver somniferum HOM05D001992 ORTHO05D002199 1.0e-14 83.6 104 61.5
DCAR_020408 Daucus carota HOM05D001992 ORTHO05D002199 1.3e-14 83.2 97 53.6
Manes.06G171600 Manihot esculenta HOM05D001992 ORTHO05D002199 1.8e-14 82.8 116 50.0
HPP92_014700 Vanilla planifolia HOM05D001992 ORTHO05D002199 1.8e-14 82.8 104 48.1
Dinv17256 Davidia involucrata HOM05D001992 ORTHO05D002199 2.3e-14 82.4 105 52.4
Lalb_Chr01g0000911 Lupinus albus HOM05D001992 ORTHO05D002199 2.3e-14 82.4 110 45.5
SEGI_11756 Sequoiadendron giganteum HOM05D001992 ORTHO05D016835 2.3e-14 82.4 104 60.6
COL.COLO4_11802 Corchorus olitorius HOM05D001992 ORTHO05D002199 3.9e-14 81.6 113 58.4
MBI04_g20980_MAGBIO Magnolia biondii HOM05D001992 ORTHO05D002199 5.1e-14 81.3 99 59.6
TWI60G1475 Tripterygium wilfordii HOM05D001992 ORTHO05D002199 5.1e-14 81.3 113 46.9
CiPaw.05G219800 Carya illinoinensis HOM05D001992 ORTHO05D002199 6.7e-14 80.9 111 47.7
Duzib128G1237 Durio zibethinus HOM05D001992 ORTHO05D002199 6.7e-14 80.9 119 47.1
Duzib177G0814 Durio zibethinus HOM05D001992 ORTHO05D002199 8.7e-14 80.5 120 52.5
THA.LOC104802922 Tarenaya hassleriana HOM05D001992 ORTHO05D002199 1.1e-13 80.1 106 55.7
Sed0022613 Sechium edule HOM05D001992 ORTHO05D002199 1.5e-13 79.7 113 58.4
CSS0032508 Camellia sinensis var. sinensis HOM05D001992 ORTHO05D002199 2.5e-13 79.0 104 51.0
Haze_00424 Corylus avellana HOM05D001992 ORTHO05D002199 4.3e-13 78.2 110 61.8
Sed0005215 Sechium edule HOM05D001992 ORTHO05D002199 4.3e-13 78.2 103 59.2
Thecc.05G213500 Theobroma cacao HOM05D001992 ORTHO05D002199 4.3e-13 78.2 121 47.9
Ciclev10019245m.g Citrus clementina HOM05D001992 ORTHO05D002199 5.6e-13 77.8 113 46.9
unitig_0.g329 Utricularia gibba HOM05D001992 ORTHO05D002199 5.6e-13 77.8 88 50.0
A10p22320 Brassica napus HOM05D001992 ORTHO05D002199 7.4e-13 77.4 108 47.2
BraA10t44291Z Brassica rapa HOM05D001992 ORTHO05D002199 7.4e-13 77.4 108 47.2
Carub.0003s0221 Capsella rubella HOM05D001992 ORTHO05D002199 7.4e-13 77.4 110 46.4
Carub.0006s1514 Capsella rubella HOM05D001992 ORTHO05D002199 7.4e-13 77.4 109 48.6
Gohir.A08G221800 Gossypium hirsutum HOM05D001992 ORTHO05D002199 2.1e-12 75.9 125 43.2
THA.LOC104820883 Tarenaya hassleriana HOM05D001992 ORTHO05D002199 2.1e-12 75.9 94 54.3
FAN01G0040 Fragaria x ananassa HOM05D001992 ORTHO05D002199 2.8e-12 75.5 109 50.5
Gohir.D08G242400 Gossypium hirsutum HOM05D001992 ORTHO05D002199 2.8e-12 75.5 121 43.8
Prupe.2G326200 Prunus persica HOM05D001992 ORTHO05D002199 2.8e-12 75.5 114 57.9
CANSAT21G0564 Cannabis sativa HOM05D001992 ORTHO05D002199 3.7e-12 75.1 115 56.5
Gorai.004G258100 Gossypium raimondii HOM05D001992 ORTHO05D002199 3.7e-12 75.1 123 43.1
THA.LOC104827214 Tarenaya hassleriana HOM05D001992 ORTHO05D002199 3.7e-12 75.1 107 58.9
C09p60170 Brassica napus HOM05D001992 ORTHO05D002199 6.2e-12 74.3 105 44.8
Lsat_1_v5_gn_9_47501 Lactuca sativa HOM05D001992 ORTHO05D002199 6.2e-12 74.3 84 57.1
Thhalv10012943m.g Eutrema salsugineum HOM05D001992 ORTHO05D002199 8.2e-12 73.9 109 46.8
AL6G27930 Arabidopsis lyrata HOM05D001992 ORTHO05D002199 1.1e-11 73.6 111 44.1
arahy.Tifrunner.gnm1.ann1.ZLW3JE Arachis hypogaea HOM05D001992 ORTHO05D002199 1.1e-11 73.6 104 53.8
BolC9t58850H Brassica oleracea HOM05D001992 ORTHO05D002199 1.1e-11 73.6 105 43.8
CsaV3_2G036040 Cucumis sativus L. HOM05D001992 ORTHO05D002199 1.1e-11 73.6 102 53.9
vmacro06511 Vaccinium macrocarpon HOM05D001992 ORTHO05D002199 1.1e-11 73.6 104 54.8
AT5G16930 Arabidopsis thaliana HOM05D001992 ORTHO05D002199 1.4e-11 73.2 111 44.1
Potri.001G458200 Populus trichocarpa HOM05D001992 ORTHO05D002199 1.8e-11 72.8 117 57.3
Lj1C1033G19 Lonicera japonica HOM05D001992 ORTHO05D002199 2.4e-11 72.4 42 83.3
RcHm_v2.0_Chr1g0384221 Rosa chinensis HOM05D001992 ORTHO05D002199 2.4e-11 72.4 109 46.8
ATR0332G044 Amborella trichopoda HOM05D001992 ORTHO05D002199 3.1e-11 72.0 103 48.5
A02p03880 Brassica napus HOM05D001992 ORTHO05D002199 4.0e-11 71.6 106 48.1
BraA02t05352Z Brassica rapa HOM05D001992 ORTHO05D002199 4.0e-11 71.6 106 48.1
AUR62028177 Chenopodium quinoa HOM05D001992 ORTHO05D002199 4.0e-11 71.6 108 48.1
Aa31LG5G13540 Aethionema arabicum HOM05D001992 ORTHO05D002199 5.3e-11 71.2 109 43.1
Sp3g02100 Schrenkiella parvula HOM05D001992 ORTHO05D002199 5.3e-11 71.2 109 44.0
VMungo1080G0700 Vigna mungo HOM05D001992 ORTHO05D002199 5.3e-11 71.2 102 47.1
ECA232G0118 Erigeron canadensis HOM05D001992 ORTHO05D002199 6.9e-11 70.9 75 57.3
Lalb_Chr19g0139971 Lupinus albus HOM05D001992 ORTHO05D002199 6.9e-11 70.9 106 56.6
Hund09792 Selenicereus undatus HOM05D001992 ORTHO05D002199 6.9e-11 70.9 101 61.4
Aqoxy7G03279 Aquilegia oxysepala HOM05D001992 ORTHO05D002199 9.0e-11 70.5 108 52.8
Glyma.12G017700 Glycine max HOM05D001992 ORTHO05D002199 9.0e-11 70.5 106 45.3
Nn5g29636 Nelumbo nucifera HOM05D001992 ORTHO05D002199 9.0e-11 70.5 97 47.4
arahy.Tifrunner.gnm1.ann1.36GKGQ Arachis hypogaea HOM05D001992 ORTHO05D002199 1.2e-10 70.1 104 58.7
CARHR077070 Cardamine hirsuta HOM05D001992 ORTHO05D002199 1.2e-10 70.1 105 52.4
CDE06G1930 Ceratophyllum demersum HOM05D001992 ORTHO05D002199 1.2e-10 70.1 103 43.7
AUR62002063 Chenopodium quinoa HOM05D001992 ORTHO05D002199 1.5e-10 69.7 108 52.8
Phvul.005G044000 Phaseolus vulgaris HOM05D001992 ORTHO05D002199 2.0e-10 69.3 102 47.1
AL3G12570 Arabidopsis lyrata HOM05D001992 ORTHO05D002199 2.6e-10 68.9 105 57.1
BcaNung00433 Brassica carinata HOM05D001992 ORTHO05D002199 2.6e-10 68.9 112 45.5
Thhalv10020284m.g Eutrema salsugineum HOM05D001992 ORTHO05D002199 2.6e-10 68.9 110 43.6
Aa31LG11G12670 Aethionema arabicum HOM05D001992 ORTHO05D002199 3.4e-10 68.6 114 42.1
Glyma.11G091700 Glycine max HOM05D001992 ORTHO05D002199 3.4e-10 68.6 107 45.8
AT3G03060 Arabidopsis thaliana HOM05D001992 ORTHO05D002199 4.5e-10 68.2 105 55.2
C05p63750 Brassica napus HOM05D001992 ORTHO05D002199 4.5e-10 68.2 40 80.0
BolC5t35044H Brassica oleracea HOM05D001992 ORTHO05D002199 5.8e-10 67.8 40 77.5
CARHR196220 Cardamine hirsuta HOM05D001992 ORTHO05D002199 5.8e-10 67.8 111 41.4
COL.COLO4_22061 Corchorus olitorius HOM05D001992 ORTHO05D002199 5.8e-10 67.8 99 48.5
TWI34G1615 Tripterygium wilfordii HOM05D001992 ORTHO05D002199 7.6e-10 67.4 109 45.9
TAR628G0596 Trochodendron aralioides HOM05D001992 ORTHO05D002199 7.6e-10 67.4 97 47.4
GSVIVG01018945001 Vitis vinifera HOM05D001992 ORTHO05D002199 7.6e-10 67.4 93 46.2
MD07G1308900 Malus domestica HOM05D001992 ORTHO05D002199 1.3e-09 66.6 118 42.4
Sabra16G0310600 Salix brachista HOM05D001992 ORTHO05D002199 1.3e-09 66.6 115 45.2
Sp6g27180 Schrenkiella parvula HOM05D001992 ORTHO05D002199 1.3e-09 66.6 112 41.1
SMO347G0120 Selaginella moellendorffii HOM05D001992 ORTHO05D002199 1.3e-09 66.6 42 78.6
CDE03G0172 Ceratophyllum demersum HOM05D001992 ORTHO05D016835 2.2e-09 65.9 108 42.6
Eucgr.A02970 Eucalyptus grandis HOM05D001992 ORTHO05D002199 2.2e-09 65.9 46 71.7
Gohir.A11G183600 Gossypium hirsutum HOM05D001992 ORTHO05D002199 2.2e-09 65.9 82 46.3
Gohir.D11G190100 Gossypium hirsutum HOM05D001992 ORTHO05D002199 2.2e-09 65.9 94 43.6
Gorai.007G202400 Gossypium raimondii HOM05D001992 ORTHO05D002199 2.2e-09 65.9 94 43.6
A05p44120 Brassica napus HOM05D001992 ORTHO05D002199 2.9e-09 65.5 40 77.5
BraSC90t46699Z Brassica rapa HOM05D001992 ORTHO05D002199 2.9e-09 65.5 40 77.5
Cfa016034 Carpinus fangiana HOM05D001992 ORTHO05D002199 2.9e-09 65.5 40 77.5
BcaC03g18526 Brassica carinata HOM05D001992 ORTHO05D002199 3.8e-09 65.1 106 45.3
C02p08680 Brassica napus HOM05D001992 ORTHO05D002199 3.8e-09 65.1 106 45.3
BolC2t06784H Brassica oleracea HOM05D001992 ORTHO05D002199 3.8e-09 65.1 106 45.3
FAN10G1963 Fragaria x ananassa HOM05D001992 ORTHO05D002199 3.8e-09 65.1 117 53.8
Lj2A454G52 Lonicera japonica HOM05D001992 ORTHO05D002199 3.8e-09 65.1 82 48.8
SHI21455 Sapria himalayana HOM05D001992 ORTHO05D002199 3.8e-09 65.1 88 45.5
Lj3A887T78 Lonicera japonica HOM05D001992 ORTHO05D002199 1.1e-08 63.5 70 64.3
FAN03G0020 Fragaria x ananassa HOM05D001992 ORTHO05D002199 1.4e-08 63.2 116 50.0
HanXRQChr05g0139021 Helianthus annuus HOM05D001992 ORTHO05D002199 1.4e-08 63.2 84 57.1
BolC1t05851H Brassica oleracea HOM05D001992 ORTHO05D002199 2.5e-08 62.4 39 74.4
Os02g0697600 Oryza sativa ssp. japonica HOM05D001992 ORTHO05D002199 3.2e-08 62.0 109 55.0
Pp3c5_16820 Physcomitrium patens HOM05D001992 ORTHO05D002199 3.2e-08 62.0 42 71.4
Rhsim08G0118400 Rhododendron simsii HOM05D001992 ORTHO05D002199 3.2e-08 62.0 99 51.5
RhsimUnG0100200 Rhododendron simsii HOM05D001992 ORTHO05D002199 3.2e-08 62.0 99 51.5
Sabra07G0020800 Salix brachista HOM05D001992 ORTHO05D002199 3.2e-08 62.0 99 53.5
Thecc.01G033900 Theobroma cacao HOM05D001992 ORTHO05D002199 3.2e-08 62.0 94 46.8
Duzib147G1129 Durio zibethinus HOM05D001992 ORTHO05D002199 7.1e-08 60.8 94 53.2
HanXRQChr03g0088431 Helianthus annuus HOM05D001992 ORTHO05D002199 7.1e-08 60.8 77 49.4
Atru.chr12.1965 Acer truncatum HOM05D001992 ORTHO05D002199 9.3e-08 60.5 36 77.8
Medtr6g005760 Medicago truncatula HOM05D001992 ORTHO05D002199 9.3e-08 60.5 103 39.8
TPR.G35375 Trifolium pratense HOM05D001992 ORTHO05D002199 9.3e-08 60.5 110 38.2
MD01G1236200 Malus domestica HOM05D001992 ORTHO05D002199 1.2e-07 60.1 115 51.3
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 1.2e-07 60.1 99 43.4
A09p11830 Brassica napus HOM05D001992 ORTHO05D002199 1.6e-07 59.7 99 40.4
Ca_04184_v3 Cicer arietinum L. HOM05D001992 ORTHO05D002199 1.6e-07 59.7 106 42.5
BNapus_Darmor_BZH_scaffold_129p00050 Brassica napus HOM05D001992 ORTHO05D002199 2.7e-07 58.9 105 53.3
BraA01t04596Z Brassica rapa HOM05D001992 ORTHO05D002199 2.7e-07 58.9 105 53.3
Potri.007G023900 Populus trichocarpa HOM05D001992 ORTHO05D002199 2.7e-07 58.9 82 62.2
Potri.011G143300 Populus trichocarpa HOM05D001992 ORTHO05D002199 2.7e-07 58.9 44 70.5
Psat1g056480 Pisum sativum HOM05D001992 ORTHO05D002199 3.5e-07 58.5 104 42.3
Ah.13g076360 Amaranthus hybridus HOM05D001992 ORTHO05D002199 4.6e-07 58.2 102 40.2
VMungo1215G0902 Vigna mungo HOM05D001992 ORTHO05D002199 4.6e-07 58.2 94 44.7
CDE06G1003 Ceratophyllum demersum HOM05D001992 ORTHO05D002199 6.0e-07 57.8 100 43.0
Ah.04g156550 Amaranthus hybridus HOM05D001992 ORTHO05D002199 1.0e-06 57.0 102 39.2
Oeu033654.1 Olea europaea HOM05D001992 ORTHO05D002199 1.0e-06 57.0 98 42.9
AT2G18330 Arabidopsis thaliana HOM05D001992 ORTHO05D002199 1.3e-06 56.6 99 38.4
MELO3C024728.2 Cucumis melo HOM05D001992 ORTHO05D002199 1.3e-06 56.6 102 54.9
CsaV3_6G046310 Cucumis sativus L. HOM05D001992 ORTHO05D002199 1.8e-06 56.2 100 42.0
MD15G1260100 Malus domestica HOM05D001992 ORTHO05D002199 1.8e-06 56.2 97 48.5
Nitab4.5_0010396g0010 Nicotiana tabacum HOM05D001992 ORTHO05D002199 1.8e-06 56.2 86 44.2
Prupe.7G156000 Prunus persica HOM05D001992 ORTHO05D002199 2.3e-06 55.8 94 44.7
Ca_04917_v3 Cicer arietinum L. HOM05D001992 ORTHO05D002199 3.9e-06 55.1 104 41.3
Eucgr.I02432 Eucalyptus grandis HOM05D001992 ORTHO05D002199 3.9e-06 55.1 98 50.0
Sp3g31730 Schrenkiella parvula HOM05D001992 ORTHO05D002199 3.9e-06 55.1 99 41.4
SpUn0030_0100 Schrenkiella parvula HOM05D001992 ORTHO05D002199 3.9e-06 55.1 99 41.4
vmacro17824 Vaccinium macrocarpon HOM05D001992 ORTHO05D002199 3.9e-06 55.1 101 59.4
Lj3g0000079 Lotus japonicus HOM05D001992 ORTHO05D002199 5.1e-06 54.7 107 40.2
Mapoly0007s0098 Marchantia polymorpha HOM05D001992 ORTHO05D002199 6.7e-06 54.3 97 43.3
Actinidia16029 Actinidia chinensis HOM05D001992 ORTHO05D002199 8.7e-06 53.9 98 42.9
AL3G51600 Arabidopsis lyrata HOM05D001992 ORTHO05D002199 8.7e-06 53.9 99 39.4
Dinv39993 Davidia involucrata HOM05D001992 ORTHO05D002199 8.7e-06 53.9 97 42.3
Thhalv10022590m.g Eutrema salsugineum HOM05D001992 ORTHO05D002199 8.7e-06 53.9 99 54.5
Potri.005G122300 Populus trichocarpa HOM05D001992 ORTHO05D002199 8.7e-06 53.9 80 45.0
QL06p046420 Quercus lobata HOM05D001992 ORTHO05D002199 8.7e-06 53.9 93 55.9


User provided reference genes

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