Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 5.4e-243 844.0 442 100.0
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 4.9e-228 794.3 446 90.1
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 5.1e-225 784.3 432 96.3
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 2.1e-207 725.7 440 80.7
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 1.4e-179 633.3 430 73.0
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 5.1e-177 624.8 435 73.8
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 5.5e-163 578.2 440 63.4
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 6.7e-161 571.2 364 73.6
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 4.4e-160 568.5 443 64.3
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 4.1e-158 562.0 365 72.6
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 4.5e-157 558.5 363 69.7
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 2.5e-155 552.7 373 70.2
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 4.2e-155 552.0 364 69.2
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 1.6e-154 550.1 374 67.9
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 4.7e-154 548.5 420 63.1
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 3.9e-153 545.4 360 69.4
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 4.4e-152 542.0 441 61.9
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 4.4e-152 542.0 363 68.9
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 5.7e-152 541.6 363 67.5
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 7.4e-152 541.2 370 67.0
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 7.4e-152 541.2 364 70.3
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 2.2e-151 539.7 366 66.7
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 2.8e-151 539.3 362 69.9
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 4.8e-151 538.5 363 68.0
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 6.3e-151 538.1 367 67.3
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 1.8e-150 536.6 367 66.8
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 5.3e-150 535.0 365 67.7
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 5.3e-150 535.0 367 66.8
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 1.2e-149 533.9 393 66.7
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 3.5e-149 532.3 365 67.7
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 5.9e-149 531.6 364 67.9
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 1.7e-148 530.0 356 68.5
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 2.2e-148 529.6 365 67.1
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 2.9e-148 529.3 370 66.2
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 1.5e-147 526.9 366 66.9
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 1.9e-147 526.6 364 65.7
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 3.2e-147 525.8 358 67.0
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 5.5e-147 525.0 363 65.8
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 7.2e-147 524.6 366 66.9
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 7.2e-147 524.6 358 69.0
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 1.2e-146 523.9 362 66.9
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 1.2e-146 523.9 413 62.0
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 1.6e-146 523.5 431 60.8
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 2.1e-146 523.1 362 67.7
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.0e-145 520.8 369 66.1
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 1.0e-145 520.8 368 65.2
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 1.8e-145 520.0 369 66.1
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 2.3e-145 519.6 355 65.9
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 3.0e-145 519.2 364 67.0
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.6e-144 516.2 368 65.5
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 2.6e-144 516.2 364 65.9
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 4.4e-144 515.4 364 66.5
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 5.7e-144 515.0 364 63.7
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 5.7e-144 515.0 369 65.0
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 1.3e-143 513.8 363 65.6
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 6.3e-143 511.5 404 61.4
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 6.3e-143 511.5 357 65.8
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.4e-142 510.4 364 65.4
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 3.1e-142 509.2 364 64.0
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 5.3e-142 508.4 357 66.7
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 5.3e-142 508.4 367 64.9
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 9.1e-142 507.7 364 63.7
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 9.1e-142 507.7 366 63.1
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.6e-141 506.9 360 65.8
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 3.5e-141 505.8 364 62.9
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 5.9e-141 505.0 416 57.7
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 1.3e-140 503.8 354 66.1
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 1.7e-140 503.4 365 62.7
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 2.2e-140 503.1 321 72.3
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 6.5e-140 501.5 415 58.1
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 8.5e-140 501.1 364 64.6
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 3.2e-139 499.2 363 63.4
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 5.5e-139 498.4 364 64.6
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 9.4e-139 497.7 363 62.3
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 9.4e-139 497.7 451 54.3
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 2.7e-138 496.1 398 60.6
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 4.7e-138 495.4 361 64.8
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 6.1e-138 495.0 359 63.2
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 4.0e-137 492.3 364 65.4
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 4.0e-137 492.3 363 65.0
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 4.1e-134 482.3 455 54.3
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 5.4e-134 481.9 351 64.1
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 9.1e-134 481.1 435 54.9
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 1.2e-133 480.7 364 61.0
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 2.0e-133 479.9 347 64.8
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 2.7e-133 479.6 363 61.2
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 2.7e-133 479.6 363 61.2
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 2.7e-133 479.6 435 54.7
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 1.1e-131 474.2 435 55.2
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 2.1e-130 469.9 366 61.5
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 3.4e-128 462.6 321 67.0
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 2.2e-127 459.9 364 59.1
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 1.0e-124 451.1 354 59.9
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 6.1e-122 441.8 364 61.0
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 2.4e-110 403.3 277 66.4
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 2.6e-104 383.3 435 52.6
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 8.1e-98 361.7 253 65.6
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 2.4e-97 360.1 364 48.1
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 5.8e-96 355.5 331 51.4
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 6.9e-89 332.0 340 50.0
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.4e-86 324.3 336 49.7
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 4.2e-86 322.8 410 41.7
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 2.1e-85 320.5 333 49.5
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 2.7e-85 320.1 207 69.6
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 1.1e-75 288.1 399 39.1
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 1.4e-62 244.6 161 67.7
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 1.1e-59 235.0 375 33.6
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 7.2e-54 215.7 119 86.6
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 1.0e-52 211.8 182 56.6
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 9.1e-41 172.2 131 60.3
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 1.7e-31 141.4 136 52.2
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 5.7e-19 99.8 50 88.0
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 4.7e-13 80.1 59 59.3
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 4.3e-06 57.0 52 51.9


User provided reference genes

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