Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402031172 Solanum tuberosum HOM05D006213 ORTHO05D008107 3.9e-185 651.4 340 100.0
Solyc01g089900.4 Solanum lycopersicum HOM05D006213 ORTHO05D008107 1.3e-175 619.8 334 95.8
CAN.G1585.8 Capsicum annuum HOM05D006213 ORTHO05D008107 1.5e-173 612.8 334 93.4
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 4.8e-167 591.3 362 85.9
Dinv44047 Davidia involucrata HOM05D006213 ORTHO05D008107 4.4e-152 541.6 334 79.6
Cc02_g25210 Coffea canephora HOM05D006213 ORTHO05D008107 2.7e-149 532.3 335 79.7
Actinidia30939 Actinidia chinensis HOM05D006213 ORTHO05D008107 1.6e-146 523.1 334 77.5
MSTRG.20674 Avicennia marina HOM05D006213 ORTHO05D008107 2.1e-146 522.7 328 80.2
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 4.7e-146 521.5 332 76.5
CiPaw.13G025000 Carya illinoinensis HOM05D006213 ORTHO05D008107 1.0e-145 520.4 334 75.7
RcHm_v2.0_Chr1g0346061 Rosa chinensis HOM05D006213 ORTHO05D008107 5.2e-145 518.1 334 76.9
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 1.2e-144 516.9 339 77.0
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 1.5e-144 516.5 328 77.4
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 2.0e-144 516.2 332 75.3
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 4.4e-144 515.0 326 77.0
Peaxi162Scf00853g00316 Petunia axillaris HOM05D006213 ORTHO05D008107 5.7e-144 514.6 341 82.1
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 4.9e-143 511.5 328 78.4
MD07G1098100 Malus domestica HOM05D006213 ORTHO05D008107 6.3e-143 511.1 334 76.6
Oeu037443.2 Olea europaea HOM05D006213 ORTHO05D008107 6.3e-143 511.1 307 82.4
Potri.002G139200 Populus trichocarpa HOM05D006213 ORTHO05D008107 6.3e-143 511.1 334 74.3
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 6.3e-143 511.1 326 78.8
Thecc.01G397800 Theobroma cacao HOM05D006213 ORTHO05D008107 1.1e-142 510.4 328 77.4
HanXRQChr17g0562541 Helianthus annuus HOM05D006213 ORTHO05D008107 1.8e-142 509.6 333 75.1
Manes.05G056250 Manihot esculenta HOM05D006213 ORTHO05D008107 1.8e-142 509.6 334 75.1
FAN06G2734 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.4e-142 508.1 334 73.4
FAN06G3851 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.4e-142 508.1 334 73.4
FAN06G4345 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.4e-142 508.1 334 73.4
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 5.4e-142 508.1 334 76.0
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 5.4e-142 508.1 334 75.4
SGA_v2.0_scaffold52G19244 Striga asiatica HOM05D006213 ORTHO05D008107 7.0e-142 507.7 328 79.0
Ciclev10019843m.g Citrus clementina HOM05D006213 ORTHO05D008107 9.2e-142 507.3 331 75.2
Eucgr.E01545 Eucalyptus grandis HOM05D006213 ORTHO05D008107 2.0e-141 506.1 334 75.1
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 3.5e-141 505.4 328 76.5
Gohir.D08G160600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 5.0e-140 501.5 328 75.9
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 8.6e-140 500.7 334 73.4
Sabra02G0108200 Salix brachista HOM05D006213 ORTHO05D008107 1.9e-139 499.6 335 72.5
Sed0013772 Sechium edule HOM05D006213 ORTHO05D008107 1.9e-139 499.6 334 73.7
CsaV3_6G006460 Cucumis sativus L. HOM05D006213 ORTHO05D008107 4.3e-139 498.4 334 74.0
Duzib133G0253 Durio zibethinus HOM05D006213 ORTHO05D008107 5.6e-139 498.0 322 77.3
FvH4_7g09360 Fragaria vesca HOM05D006213 ORTHO05D008107 5.6e-139 498.0 334 73.1
Gohir.A08G139600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 1.2e-138 496.9 328 75.3
Sabra02G0108400 Salix brachista HOM05D006213 ORTHO05D008107 8.0e-138 494.2 335 71.6
Aqoxy3G02673 Aquilegia oxysepala HOM05D006213 ORTHO05D008107 1.0e-137 493.8 334 73.1
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 1.0e-137 493.8 334 73.1
ClCG06G000670 Citrullus lanatus HOM05D006213 ORTHO05D008107 1.0e-137 493.8 334 72.8
CARHR000180 Cardamine hirsuta HOM05D006213 ORTHO05D008107 1.4e-137 493.4 334 73.4
Nn1g00791 Nelumbo nucifera HOM05D006213 ORTHO05D008107 2.3e-137 492.7 331 73.1
AUR62013761 Chenopodium quinoa HOM05D006213 ORTHO05D008107 2.6e-136 489.2 334 73.1
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 2.6e-136 489.2 307 77.9
AL1G10080 Arabidopsis lyrata HOM05D006213 ORTHO05D008107 7.5e-136 487.6 328 72.3
Thhalv10007459m.g Eutrema salsugineum HOM05D006213 ORTHO05D008107 4.9e-135 485.0 331 71.9
Psat4g223120 Pisum sativum HOM05D006213 ORTHO05D008107 4.9e-135 485.0 327 72.5
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 8.3e-135 484.2 327 73.1
Carub.0001s0002 Capsella rubella HOM05D006213 ORTHO05D008107 2.4e-134 482.6 331 70.7
PSO837G0013 Papaver somniferum HOM05D006213 ORTHO05D008107 4.1e-134 481.9 328 72.6
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 7.0e-134 481.1 332 71.1
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 7.0e-134 481.1 332 71.1
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 9.2e-134 480.7 328 71.6
PSO017G1536 Papaver somniferum HOM05D006213 ORTHO05D008107 1.2e-133 480.3 328 71.6
C05p00060 Brassica napus HOM05D006213 ORTHO05D008107 6.0e-133 478.0 332 70.8
BolC5t28793H Brassica oleracea HOM05D006213 ORTHO05D008107 6.0e-133 478.0 332 70.8
Lj3g0010513 Lotus japonicus HOM05D006213 ORTHO05D008107 1.0e-132 477.2 323 72.8
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 1.0e-132 477.2 307 76.9
Phvul.010G045600 Phaseolus vulgaris HOM05D006213 ORTHO05D008107 5.0e-132 474.9 331 71.6
Sp1g00110 Schrenkiella parvula HOM05D006213 ORTHO05D008107 6.6e-132 474.6 328 72.0
THA.LOC104814061 Tarenaya hassleriana HOM05D006213 ORTHO05D008107 1.5e-131 473.4 329 72.9
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 1.9e-131 473.0 363 65.8
MBI04_g13842_MAGBIO Magnolia biondii HOM05D006213 ORTHO05D008107 3.3e-131 472.2 337 72.4
Medtr8g007345 Medicago truncatula HOM05D006213 ORTHO05D008107 4.3e-131 471.9 327 69.4
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 4.3e-131 471.9 333 70.0
vmacro13511 Vaccinium macrocarpon HOM05D006213 ORTHO05D008107 7.3e-131 471.1 418 60.5
Sc23g0004890 Simmondsia chinensis HOM05D006213 ORTHO05D008107 1.4e-129 466.8 334 68.6
CANSAT25G1963 Cannabis sativa HOM05D006213 ORTHO05D008107 1.8e-129 466.5 334 69.8
BraA09t42282Z Brassica rapa HOM05D006213 ORTHO05D008107 6.8e-129 464.5 333 68.8
Sopen01g035740 Solanum pennellii HOM05D006213 ORTHO05D008107 2.6e-128 462.6 249 95.2
BcaC07g42440 Brassica carinata HOM05D006213 ORTHO05D008107 2.9e-127 459.1 333 67.3
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 4.1e-126 455.3 331 65.9
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 1.7e-124 449.9 321 69.5
Os04g0544900 Oryza sativa ssp. japonica HOM05D006213 ORTHO05D008107 1.7e-124 449.9 328 66.8
MELO3C022474.2 Cucumis melo HOM05D006213 ORTHO05D008107 2.5e-123 446.0 296 73.3
AT1G02145 Arabidopsis thaliana HOM05D006213 ORTHO05D008107 1.2e-120 437.2 292 72.6
BcaB03g13635 Brassica carinata HOM05D006213 ORTHO05D008107 2.6e-120 436.0 331 65.9
Hund17106 Selenicereus undatus HOM05D006213 ORTHO05D008107 5.6e-115 418.3 334 65.0
A09p69370 Brassica napus HOM05D006213 ORTHO05D008107 1.6e-114 416.8 345 62.6
TPR.G32127 Trifolium pratense HOM05D006213 ORTHO05D008107 3.4e-112 409.1 353 60.6
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 1.2e-109 400.6 334 57.8
Zm00001eb075160 Zea mays HOM05D006213 ORTHO05D008107 3.5e-109 399.1 327 61.8
Mapoly0044s0100 Marchantia polymorpha HOM05D006213 ORTHO05D008107 1.9e-107 393.3 321 59.8
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 1.3e-106 390.6 321 60.7
EL10Ac1g00745 Beta vulgaris HOM05D006213 ORTHO05D008107 2.8e-106 389.4 257 73.9
BolC8t52928H Brassica oleracea HOM05D006213 ORTHO05D008107 2.7e-101 372.9 343 57.7
AUR62023393 Chenopodium quinoa HOM05D006213 ORTHO05D008107 2.7e-101 372.9 334 59.0
VMungo0331G0117 Vigna mungo HOM05D006213 ORTHO05D008107 1.5e-99 367.1 331 60.4
FAN10G1434 Fragaria x ananassa HOM05D006213 ORTHO05D008107 5.3e-97 358.6 254 68.1
Lj9A554T27 Lonicera japonica HOM05D006213 ORTHO05D008107 2.0e-96 356.7 227 75.8
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 9.9e-96 354.4 292 61.3
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 8.4e-95 351.3 827 35.4
Glyma.07G119300 Glycine max HOM05D006213 ORTHO05D008107 2.3e-92 343.2 233 71.7
Haze_02866 Corylus avellana HOM05D006213 ORTHO05D008107 3.2e-86 322.8 381 52.5
SGA_v2.0_scaffold340G49332 Striga asiatica HOM05D006213 ORTHO05D008107 3.2e-86 322.8 284 63.0
Lj2g0022411 Lotus japonicus HOM05D006213 ORTHO05D008107 2.1e-85 320.1 235 68.1
unitig_8.g3848 Utricularia gibba HOM05D006213 ORTHO05D008107 6.0e-85 318.5 322 56.5
Rhsim07G0037600 Rhododendron simsii HOM05D006213 ORTHO05D008107 5.7e-83 312.0 326 54.0
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 1.2e-80 304.3 307 52.4
FAN01G1024 Fragaria x ananassa HOM05D006213 ORTHO05D008107 2.5e-78 296.6 201 72.6
SHI13624 Sapria himalayana HOM05D006213 ORTHO05D008107 2.9e-71 273.1 302 52.3
FAN06G1264 Fragaria x ananassa HOM05D006213 ORTHO05D008107 4.5e-64 249.2 201 63.2
MCO12G031 Micromonas commoda HOM05D006213 ORTHO05D008107 8.8e-60 235.0 367 39.2
Sabra02G0107000 Salix brachista HOM05D006213 ORTHO05D008107 8.8e-52 208.4 136 70.6
PRCOL_00003622 Prasinoderma coloniale HOM05D006213 ORTHO05D008107 2.4e-49 200.3 311 40.8
SEGI_13726 Sequoiadendron giganteum HOM05D006213 ORTHO05D008107 3.6e-45 186.4 132 62.9
Atru.chr5.108 Acer truncatum HOM05D006213 ORTHO05D008107 9.1e-41 171.8 148 58.8
Ca_14798_v3 Cicer arietinum L. HOM05D006213 ORTHO05D008107 4.5e-40 169.5 115 73.9
DCAR_029493 Daucus carota HOM05D006213 ORTHO05D008107 8.3e-26 122.1 65 83.1
arahy.Tifrunner.gnm1.ann1.RXQ5U4 Arachis hypogaea HOM05D006213 ORTHO05D008107 2.7e-24 117.1 88 68.2
Psat4g223040 Pisum sativum HOM05D006213 ORTHO05D008107 1.5e-22 111.3 80 72.5
Psat5g245640 Pisum sativum HOM05D000300 ORTHO05D000383 4.1e-17 93.2 64 71.9
FAN06G1132 Fragaria x ananassa HOM05D006213 ORTHO05D008107 8.6e-15 85.5 101 45.5
Migut.B01510 Erythranthe guttata HOM05D006213 ORTHO05D003423 7.3e-14 82.4 43 86.0
TPR.G39431 Trifolium pratense HOM05D006213 ORTHO05D008107 5.2e-12 76.3 42 85.7
Atru.chr5.109 Acer truncatum HOM05D006213 ORTHO05D000044 5.4e-09 66.2 137 36.5
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 3.9e-07 60.1 115 30.4
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 5.1e-07 59.7 225 27.1
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 1.1e-06 58.5 209 24.9
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 3.3e-06 57.0 228 23.7
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 9.5e-06 55.5 208 26.4
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 9.5e-06 55.5 208 26.4


User provided reference genes

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