Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402029222 Solanum tuberosum HOM05D003290 ORTHO05D397822 2.7e-55 218.4 106 100.0
Nitab4.5_0005031g0060 Nicotiana tabacum HOM05D003290 ORTHO05D003866 1.5e-21 106.3 66 83.3
Nitab4.5_0009873g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 1.5e-21 106.3 66 83.3
Solyc04g018100.4 Solanum lycopersicum HOM05D003290 ORTHO05D003866 2.5e-21 105.5 66 83.3
Sopen04g009310 Solanum pennellii HOM05D003290 ORTHO05D003866 2.5e-21 105.5 66 83.3
CAN.G1237.29 Capsicum annuum HOM05D003290 ORTHO05D003866 9.5e-21 103.6 66 81.8
Peaxi162Scf00130g01216 Petunia axillaris HOM05D003290 ORTHO05D003866 3.2e-16 88.6 66 69.7
GSVIVG01011573001 Vitis vinifera HOM05D003290 ORTHO05D003866 5.4e-08 61.2 76 43.4
PSO729G0139 Papaver somniferum HOM05D003290 ORTHO05D003866 9.2e-08 60.5 73 42.5
Potri.008G140700 Populus trichocarpa HOM05D003290 ORTHO05D003866 9.2e-08 60.5 60 53.3
Psat7g085560 Pisum sativum HOM05D003290 ORTHO05D003866 1.2e-07 60.1 76 43.4
Cpa.g.sc2.68 Carica papaya HOM05D003290 ORTHO05D003866 1.6e-07 59.7 60 53.3
Dinv07020 Davidia involucrata HOM05D003290 ORTHO05D003866 2.1e-07 59.3 60 53.3
Lalb_Chr13g0293001 Lupinus albus HOM05D003290 ORTHO05D003866 2.1e-07 59.3 60 53.3
Aqoxy4G00109 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 2.7e-07 58.9 55 56.4
COL.COLO4_27555 Corchorus olitorius HOM05D003290 ORTHO05D003866 2.7e-07 58.9 66 50.0
SGA_v2.0_scaffold348G49593 Striga asiatica HOM05D003290 ORTHO05D003866 2.7e-07 58.9 60 51.7
Dinv02702 Davidia involucrata HOM05D003290 ORTHO05D003866 4.6e-07 58.2 61 50.8
PSO170G2638 Papaver somniferum HOM05D003290 ORTHO05D003866 6.0e-07 57.8 72 43.1
PSO170G6380 Papaver somniferum HOM05D003290 ORTHO05D003866 6.0e-07 57.8 72 43.1
Cfa015081 Carpinus fangiana HOM05D003290 ORTHO05D003866 7.8e-07 57.4 67 44.8
MD16G1011400 Malus domestica HOM05D003290 ORTHO05D003866 1.0e-06 57.0 60 50.0
Nn4g24593 Nelumbo nucifera HOM05D003290 ORTHO05D003866 1.0e-06 57.0 60 50.0
RcHm_v2.0_Chr4g0445491 Rosa chinensis HOM05D003290 ORTHO05D003866 1.0e-06 57.0 60 50.0
TPR.G11847 Trifolium pratense HOM05D003290 ORTHO05D003866 1.0e-06 57.0 60 51.7
CsaV3_5G017250 Cucumis sativus L. HOM05D003290 ORTHO05D003866 1.3e-06 56.6 55 52.7
Prupe.1G339200 Prunus persica HOM05D003290 ORTHO05D003866 1.3e-06 56.6 60 48.3
PGR142G0945 Punica granatum HOM05D003290 ORTHO05D003866 1.3e-06 56.6 54 55.6
Glyma.08G092000 Glycine max HOM05D003290 ORTHO05D003866 1.7e-06 56.2 60 51.7
Phvul.002G185150 Phaseolus vulgaris HOM05D003290 ORTHO05D003866 1.7e-06 56.2 60 51.7
VMungo0251G2069 Vigna mungo HOM05D003290 ORTHO05D003866 1.7e-06 56.2 60 51.7
Ah.03g147350 Amaranthus hybridus HOM05D003290 ORTHO05D003866 2.3e-06 55.8 60 48.3
CiPaw.05G159900 Carya illinoinensis HOM05D003290 ORTHO05D003866 2.3e-06 55.8 76 40.8
FAN12G1356 Fragaria x ananassa HOM05D003290 ORTHO05D003866 2.3e-06 55.8 60 48.3
Manes.17G091100 Manihot esculenta HOM05D003290 ORTHO05D003866 2.3e-06 55.8 60 50.0
Os12g0641100 Oryza sativa ssp. japonica HOM05D003290 ORTHO05D003866 2.3e-06 55.8 55 54.5
Ca_18198_v3 Cicer arietinum L. HOM05D003290 ORTHO05D003866 3.0e-06 55.5 60 51.7
Cc11_g05260 Coffea canephora HOM05D003290 ORTHO05D003866 3.0e-06 55.5 74 43.2
Haze_10795 Corylus avellana HOM05D003290 ORTHO05D003866 3.0e-06 55.5 67 43.3
FvH4_4g35880 Fragaria vesca HOM05D003290 ORTHO05D003866 3.0e-06 55.5 60 48.3
FAN22G1284 Fragaria x ananassa HOM05D003290 ORTHO05D003866 3.0e-06 55.5 60 48.3
Potri.010G100900 Populus trichocarpa HOM05D003290 ORTHO05D003866 3.0e-06 55.5 60 50.0
ClCG01G006860 Citrullus lanatus HOM05D003290 ORTHO05D003866 3.9e-06 55.1 55 50.9
Hma1.2p1_0197F.1_g085170 Hydrangea macrophylla HOM05D003290 ORTHO05D003866 3.9e-06 55.1 60 48.3
Lj4g0019755 Lotus japonicus HOM05D003290 ORTHO05D003866 3.9e-06 55.1 60 51.7
MBI13_g17879_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 3.9e-06 55.1 60 46.7
Sed0007344 Sechium edule HOM05D003290 ORTHO05D003866 3.9e-06 55.1 54 51.9
arahy.Tifrunner.gnm1.ann1.4ZG746 Arachis hypogaea HOM05D003290 ORTHO05D003866 5.1e-06 54.7 60 48.3
arahy.Tifrunner.gnm1.ann1.GST19D Arachis hypogaea HOM05D003290 ORTHO05D003866 5.1e-06 54.7 60 48.3
arahy.Tifrunner.gnm1.ann1.P8F85A Arachis hypogaea HOM05D003290 ORTHO05D003866 5.1e-06 54.7 60 48.3
MELO3C005228.2 Cucumis melo HOM05D003290 ORTHO05D003866 5.1e-06 54.7 55 50.9
Migut.E00570 Erythranthe guttata HOM05D003290 ORTHO05D003866 5.1e-06 54.7 60 50.0
Gohir.A03G113800 Gossypium hirsutum HOM05D003290 ORTHO05D003866 5.1e-06 54.7 66 47.0
Gohir.D02G138100 Gossypium hirsutum HOM05D003290 ORTHO05D003866 5.1e-06 54.7 66 47.0
Gorai.005G154600 Gossypium raimondii HOM05D003290 ORTHO05D003866 5.1e-06 54.7 66 47.0
BcaB07g30722 Brassica carinata HOM05D003290 ORTHO05D003866 6.6e-06 54.3 74 40.5
CANSAT78G1043 Cannabis sativa HOM05D003290 ORTHO05D003866 6.6e-06 54.3 60 48.3
CAN.G282.94 Capsicum annuum HOM05D003290 ORTHO05D003866 6.6e-06 54.3 60 46.7
Lj6C728G5 Lonicera japonica HOM05D003290 ORTHO05D003866 6.6e-06 54.3 74 41.9
Solyc01g005020.3 Solanum lycopersicum HOM05D003290 ORTHO05D003866 6.6e-06 54.3 60 46.7
Sopen01g001090 Solanum pennellii HOM05D003290 ORTHO05D003866 6.6e-06 54.3 60 46.7
PGSC0003DMG400022786 Solanum tuberosum HOM05D003290 ORTHO05D003866 6.6e-06 54.3 60 46.7
MSTRG.2101 Avicennia marina HOM05D003290 ORTHO05D003866 8.6e-06 53.9 66 45.5
Carub.0001s1442 Capsella rubella HOM05D003290 ORTHO05D003866 8.6e-06 53.9 60 46.7
AUR62003491 Chenopodium quinoa HOM05D003290 ORTHO05D003866 8.6e-06 53.9 60 46.7
HanXRQChr12g0381631 Helianthus annuus HOM05D003290 ORTHO05D003866 8.6e-06 53.9 88 38.6
Manes.15G139900 Manihot esculenta HOM05D003290 ORTHO05D003866 8.6e-06 53.9 60 46.7
Peaxi162Scf00349g00111 Petunia axillaris HOM05D003290 ORTHO05D003866 8.6e-06 53.9 60 46.7
Sc03g0005960 Simmondsia chinensis HOM05D003290 ORTHO05D003866 8.6e-06 53.9 60 46.7
Zm00001eb033240 Zea mays HOM05D003290 ORTHO05D003866 8.6e-06 53.9 55 52.7


User provided reference genes

Program Settings