Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 7.5e-308 1059.7 531 100.0
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 1.2e-297 1025.8 531 96.4
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 6.1e-294 1013.4 531 95.9
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 8.0e-294 1013.1 531 95.5
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 3.2e-274 948.0 534 89.0
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.0e-216 756.9 535 76.1
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 3.1e-197 692.2 541 69.3
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 7.0e-197 691.0 535 65.8
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 4.0e-192 675.2 539 63.5
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 2.2e-190 669.5 548 63.5
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 4.3e-186 655.2 532 62.0
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 5.2e-184 648.3 539 60.5
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 5.7e-183 644.8 537 62.6
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 1.1e-181 640.6 533 61.4
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 1.4e-181 640.2 540 60.0
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 1.4e-181 640.2 533 61.4
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 2.0e-180 636.3 538 59.9
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 4.6e-180 635.2 533 60.2
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 5.9e-180 634.8 542 59.6
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 5.9e-180 634.8 494 63.8
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 1.0e-179 634.0 556 57.4
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 1.7e-179 633.3 535 66.0
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 3.0e-179 632.5 535 60.7
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 6.6e-179 631.3 499 63.3
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 8.6e-179 630.9 541 59.7
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 2.5e-178 629.4 538 60.0
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 8.0e-177 624.4 538 59.1
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 2.3e-176 622.9 536 59.5
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 6.8e-176 621.3 535 58.3
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 9.8e-175 617.5 534 59.0
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 1.7e-174 616.7 530 58.3
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 2.2e-174 616.3 534 60.7
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 2.9e-174 615.9 532 58.8
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 4.9e-174 615.1 537 61.8
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 8.3e-174 614.4 546 57.1
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 1.4e-173 613.6 532 59.8
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 1.9e-173 613.2 532 58.8
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 2.4e-173 612.8 537 58.7
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 2.4e-173 612.8 536 58.6
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 7.0e-173 611.3 535 58.5
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 2.7e-172 609.4 532 58.6
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 7.8e-172 607.8 534 59.2
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 3.9e-171 605.5 535 60.0
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 6.6e-171 604.7 538 57.2
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.5e-170 603.6 532 60.2
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 3.3e-170 602.4 534 59.6
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 7.3e-170 601.3 532 59.2
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 9.5e-170 600.9 537 57.4
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 1.4e-168 597.0 541 57.3
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 1.3e-166 590.5 529 54.8
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 8.3e-166 587.8 530 56.2
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 3.2e-165 585.9 531 55.2
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 1.2e-164 583.9 532 55.5
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 1.6e-164 583.6 530 54.9
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 2.1e-164 583.2 531 54.6
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 3.5e-164 582.4 530 54.7
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 7.8e-164 581.3 538 57.4
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 1.3e-163 580.5 522 56.9
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 2.3e-163 579.7 527 54.8
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 5.1e-163 578.6 535 54.2
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 8.6e-163 577.8 527 54.6
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 1.9e-162 576.6 536 56.0
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 3.3e-162 575.9 539 53.6
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 1.2e-161 573.9 535 55.1
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 2.1e-161 573.2 536 55.2
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 4.0e-160 568.9 531 57.1
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 5.2e-160 568.5 538 52.8
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 6.8e-160 568.2 531 56.9
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 3.4e-159 565.8 632 50.6
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 5.8e-159 565.1 531 53.5
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 2.9e-158 562.8 531 54.2
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 3.7e-158 562.4 537 54.6
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 3.7e-158 562.4 533 53.8
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 1.1e-157 560.8 537 54.6
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 1.3e-155 553.9 532 54.3
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.7e-155 553.5 532 55.6
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 3.0e-155 552.7 574 52.3
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 2.1e-153 546.6 758 42.6
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 2.6e-151 539.7 482 57.1
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.4e-151 539.3 531 54.8
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 5.8e-151 538.5 531 52.5
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 2.2e-150 536.6 367 70.8
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.7e-147 526.9 486 55.8
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 5.3e-144 515.4 493 55.4
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.0e-143 513.5 531 53.7
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 2.6e-143 513.1 536 52.4
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 2.4e-141 506.5 473 55.4
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 1.6e-140 503.8 472 54.2
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 3.5e-124 449.5 531 45.2
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 7.9e-124 448.4 444 52.3
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 1.0e-110 404.8 530 41.5
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 2.2e-110 403.7 471 48.6
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 1.8e-107 394.0 533 41.5
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 6.3e-105 385.6 294 63.6
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 3.4e-103 379.8 370 51.6
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 2.2e-102 377.1 259 70.7
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 9.4e-93 345.1 258 66.7
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 8.0e-92 342.0 268 65.7
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 5.0e-86 322.8 297 56.9
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 2.2e-78 297.4 526 34.8
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 1.8e-75 287.7 278 55.4
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 6.3e-73 279.3 497 36.6
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.5e-69 267.3 202 63.9
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.8e-67 261.2 310 47.4
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 5.7e-66 256.1 258 53.9
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 6.8e-59 232.6 441 37.4
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 1.5e-58 231.5 266 47.7
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.1e-53 215.3 268 46.3
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 2.8e-52 210.7 178 57.9
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 4.1e-48 196.8 183 55.7
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.7e-41 174.9 280 40.0
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 8.6e-38 162.5 426 29.6
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 3.3e-37 160.6 123 68.3
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 8.7e-30 136.0 123 55.3
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.1e-21 109.0 111 55.0
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 1.9e-21 108.2 152 41.4
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 1.1e-16 92.4 479 25.1
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 3.7e-12 77.4 106 41.5
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 3.7e-12 77.4 106 41.5
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 3.7e-12 77.4 106 41.5
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 2.0e-10 71.6 331 22.7
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 5.8e-10 70.1 112 36.6
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 2.2e-09 68.2 84 42.9
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 7.1e-08 63.2 413 21.5
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 2.7e-07 61.2 337 21.1


User provided reference genes

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