Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 6.0e-158 560.8 290 100.0
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 4.7e-155 551.2 290 97.9
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 7.5e-153 543.9 290 96.9
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 3.3e-148 528.5 292 92.8
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 7.3e-140 500.7 298 89.6
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 1.2e-137 493.4 298 89.3
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 3.4e-137 491.9 291 87.6
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 8.1e-123 444.1 296 78.7
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 1.8e-122 443.0 296 78.4
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 2.6e-121 439.1 296 78.4
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 7.6e-121 437.6 291 78.7
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 7.6e-121 437.6 296 77.7
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 1.3e-120 436.8 294 77.9
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 2.4e-119 432.6 294 76.9
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 7.1e-119 431.0 298 77.9
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 9.3e-119 430.6 291 78.4
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 1.6e-118 429.9 296 77.0
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 3.5e-118 428.7 296 76.7
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 4.6e-118 428.3 296 76.0
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 7.9e-118 427.6 295 76.3
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 1.8e-117 426.4 296 75.7
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 3.0e-117 425.6 296 75.7
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 3.9e-117 425.2 291 77.3
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 5.1e-117 424.9 296 75.0
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 1.1e-116 423.7 292 76.4
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 1.5e-116 423.3 291 75.3
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 1.9e-116 422.9 297 75.4
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 1.9e-116 422.9 296 75.7
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 3.3e-116 422.2 297 75.4
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 3.3e-116 422.2 293 77.5
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 4.3e-116 421.8 293 75.8
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 4.3e-116 421.8 304 75.7
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 1.3e-115 420.2 300 74.7
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 1.6e-115 419.9 298 75.5
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 2.1e-115 419.5 291 75.6
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 3.7e-115 418.7 298 76.5
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 3.7e-115 418.7 293 75.4
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.7e-115 418.7 293 76.1
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.7e-115 418.7 296 75.3
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 8.1e-115 417.5 293 75.4
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.1e-114 417.2 293 75.1
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 1.1e-114 417.2 296 73.6
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.8e-114 416.4 293 75.8
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 1.8e-114 416.4 292 74.7
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 3.1e-114 415.6 296 73.6
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 5.3e-114 414.8 293 74.7
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 5.3e-114 414.8 290 74.1
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 6.9e-114 414.5 294 74.5
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 9.0e-114 414.1 299 74.2
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 9.0e-114 414.1 296 75.7
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 1.5e-113 413.3 294 75.9
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 1.5e-113 413.3 299 73.6
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 2.0e-113 412.9 293 74.4
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 4.5e-113 411.8 294 75.9
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 4.5e-113 411.8 296 75.7
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 4.5e-113 411.8 295 73.9
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 5.8e-113 411.4 296 75.3
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 7.6e-113 411.0 297 73.4
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 7.6e-113 411.0 297 75.1
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 3.8e-112 408.7 293 74.1
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 4.9e-112 408.3 293 74.1
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 1.1e-111 407.1 293 74.7
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 1.4e-111 406.8 294 73.8
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.4e-111 406.8 297 74.7
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 1.9e-111 406.4 298 72.5
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 1.9e-111 406.4 296 72.3
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 2.5e-111 406.0 297 75.4
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 3.2e-111 405.6 301 73.8
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 7.1e-111 404.4 293 72.4
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 4.6e-110 401.7 291 71.8
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 3.9e-109 398.7 299 72.6
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 5.1e-109 398.3 299 73.2
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 3.3e-108 395.6 292 71.6
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 3.3e-108 395.6 292 72.6
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 5.7e-108 394.8 298 71.1
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 7.4e-108 394.4 299 73.2
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 4.8e-107 391.7 312 67.9
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 4.8e-107 391.7 291 70.1
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 6.3e-107 391.3 228 84.6
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 6.3e-107 391.3 291 70.4
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 8.2e-107 391.0 295 71.2
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 1.8e-106 389.8 291 71.1
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 1.8e-106 389.8 257 77.4
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 2.4e-106 389.4 292 70.2
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 4.5e-105 385.2 240 82.5
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 1.3e-104 383.6 235 81.7
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 3.8e-104 382.1 293 70.0
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 1.1e-103 380.6 291 69.4
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 1.1e-103 380.6 291 69.4
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 1.4e-103 380.2 294 70.7
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 1.9e-103 379.8 291 69.4
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 1.9e-103 379.8 291 69.4
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 1.9e-103 379.8 291 69.4
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 2.5e-103 379.4 294 69.4
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 2.5e-103 379.4 291 69.8
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 3.2e-103 379.0 293 69.6
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 4.2e-103 378.6 291 69.8
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 2.7e-102 375.9 293 70.0
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 2.7e-102 375.9 291 68.7
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 3.6e-102 375.6 293 68.3
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 6.1e-102 374.8 225 83.6
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 1.9e-100 369.8 291 66.3
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 1.9e-95 353.2 293 65.5
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 1.2e-94 350.5 234 76.5
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 6.7e-93 344.7 205 83.4
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 7.4e-92 341.3 272 66.9
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.7e-91 340.1 223 77.6
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 2.6e-89 332.8 277 64.6
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 2.9e-88 329.3 227 72.7
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 3.8e-88 328.9 227 73.1
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 9.7e-84 314.3 238 66.8
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 1.8e-82 310.1 225 70.7
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.8e-74 283.5 203 68.0
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 4.5e-73 278.9 229 61.1
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.7e-67 260.4 212 67.9
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.7e-59 233.8 137 81.0
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 2.0e-57 226.9 142 74.6
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 7.0e-50 201.8 208 48.1
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 5.9e-49 198.7 203 46.3
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 1.1e-39 167.9 222 40.5
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 1.1e-34 151.4 89 85.4
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 1.2e-33 147.9 86 82.6
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 1.2e-33 147.9 83 88.0
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 1.3e-24 117.9 64 85.9
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 3.4e-12 76.6 82 61.0


User provided reference genes

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