Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402027324 Solanum tuberosum HOM05D000992 ORTHO05D001928 1.6e-73 279.3 135 100.0
PGSC0003DMG404027324 Solanum tuberosum HOM05D000992 ORTHO05D001928 1.1e-66 256.5 134 91.8
Sopen11g003640 Solanum pennellii HOM05D000992 ORTHO05D001928 1.5e-66 256.1 134 91.8
Solyc11g007780.2 Solanum lycopersicum HOM05D000992 ORTHO05D001928 9.5e-66 253.4 134 91.8
Nitab4.5_0012197g0010 Nicotiana tabacum HOM05D000992 ORTHO05D001928 3.0e-59 231.9 135 84.4
Nitab4.5_0000593g0260 Nicotiana tabacum HOM05D000992 ORTHO05D001928 5.6e-58 227.6 135 83.0
Peaxi162Scf00321g00008 Petunia axillaris HOM05D000992 ORTHO05D001928 2.6e-55 218.8 135 79.3
Dinv31274 Davidia involucrata HOM05D000992 ORTHO05D001928 6.2e-41 171.0 131 67.9
FAN10G2691 Fragaria x ananassa HOM05D000992 ORTHO05D001928 1.8e-40 169.5 137 62.0
FvH4_7g06890 Fragaria vesca HOM05D000992 ORTHO05D001928 6.8e-40 167.5 137 61.3
FAN03G3495 Fragaria x ananassa HOM05D000992 ORTHO05D001928 1.2e-39 166.8 137 61.3
FAN06G0927 Fragaria x ananassa HOM05D000992 ORTHO05D001928 4.4e-39 164.9 137 60.6
Hma1.2p1_1275F.1_g271990 Hydrangea macrophylla HOM05D000992 ORTHO05D001928 5.8e-39 164.5 132 68.2
Cc02_g10430 Coffea canephora HOM05D000992 ORTHO05D001928 9.9e-39 163.7 140 62.9
Prupe.2G096500 Prunus persica HOM05D000992 ORTHO05D001928 3.8e-38 161.8 144 61.1
HanXRQChr14g0456231 Helianthus annuus HOM05D000992 ORTHO05D001928 6.4e-38 161.0 138 58.0
MBI01_g19098_MAGBIO Magnolia biondii HOM05D000992 ORTHO05D001928 6.4e-38 161.0 127 60.6
Lalb_Chr02g0151201 Lupinus albus HOM05D000992 ORTHO05D001928 1.1e-37 160.2 140 59.3
Cpa.g.sc128.69 Carica papaya HOM05D000992 ORTHO05D001928 1.9e-37 159.5 139 63.3
Duzib128G0113 Durio zibethinus HOM05D000992 ORTHO05D001928 1.9e-37 159.5 135 60.7
Sabra08G0019500 Salix brachista HOM05D000992 ORTHO05D006704 1.9e-37 159.5 132 65.2
Haze_02650 Corylus avellana HOM05D000992 ORTHO05D001928 4.1e-37 158.3 140 61.4
Lalb_Chr06g0170071 Lupinus albus HOM05D000992 ORTHO05D001928 4.1e-37 158.3 140 59.3
Cfa011196 Carpinus fangiana HOM05D000992 ORTHO05D001928 7.1e-37 157.5 140 61.4
Glyma.20G190300 Glycine max HOM05D000992 ORTHO05D001928 7.1e-37 157.5 134 62.7
MD07G1075600 Malus domestica HOM05D000992 ORTHO05D001928 7.1e-37 157.5 143 60.8
SalBow4G0596 Salvia bowleyana HOM05D000992 ORTHO05D001928 7.1e-37 157.5 134 61.9
TAR633G1854 Trochodendron aralioides HOM05D000992 ORTHO05D001928 7.1e-37 157.5 136 62.5
Migut.F01890 Erythranthe guttata HOM05D000992 ORTHO05D001928 9.2e-37 157.1 134 61.2
Atru.chr12.925 Acer truncatum HOM05D000992 ORTHO05D001928 1.2e-36 156.8 140 60.7
MSTRG.9121 Avicennia marina HOM05D000992 ORTHO05D001928 1.2e-36 156.8 134 64.9
ECA238G4096 Erigeron canadensis HOM05D000992 ORTHO05D001928 1.2e-36 156.8 138 58.7
Glyma.10G200200 Glycine max HOM05D000992 ORTHO05D001928 1.2e-36 156.8 134 61.9
RcHm_v2.0_Chr1g0336731 Rosa chinensis HOM05D000992 ORTHO05D001928 1.2e-36 156.8 138 61.6
vmacro07209 Vaccinium macrocarpon HOM05D000992 ORTHO05D001928 1.2e-36 156.8 133 63.2
Lsat_1_v5_gn_2_103021 Lactuca sativa HOM05D000992 ORTHO05D001928 1.6e-36 156.4 138 56.5
Potri.008G029200 Populus trichocarpa HOM05D000992 ORTHO05D001928 1.6e-36 156.4 134 64.2
Lj5g0011693 Lotus japonicus HOM05D000992 ORTHO05D001928 2.1e-36 156.0 140 58.6
Potri.010G232400 Populus trichocarpa HOM05D000992 ORTHO05D001928 2.1e-36 156.0 133 63.2
Nn6g35156 Nelumbo nucifera HOM05D000992 ORTHO05D001928 2.7e-36 155.6 133 63.9
CiPaw.13G034500 Carya illinoinensis HOM05D000992 ORTHO05D001928 4.6e-36 154.8 140 60.7
Actinidia06712 Actinidia chinensis HOM05D000992 ORTHO05D001928 6.0e-36 154.5 136 62.5
DCAR_006381 Daucus carota HOM05D000992 ORTHO05D001928 6.0e-36 154.5 131 64.9
arahy.Tifrunner.gnm1.ann1.IPCF80 Arachis hypogaea HOM05D000992 ORTHO05D001928 1.3e-35 153.3 140 58.6
Sed0004636 Sechium edule HOM05D000992 ORTHO05D001928 3.0e-35 152.1 138 60.1
arahy.Tifrunner.gnm1.ann1.M78ZSX Arachis hypogaea HOM05D000992 ORTHO05D001928 6.6e-35 151.0 140 57.9
Sabra10G0180200 Salix brachista HOM05D000992 ORTHO05D001928 6.6e-35 151.0 133 61.7
Actinidia18560 Actinidia chinensis HOM05D000992 ORTHO05D001928 8.6e-35 150.6 136 61.8
ClCG08G007980 Citrullus lanatus HOM05D000992 ORTHO05D001928 8.6e-35 150.6 140 58.6
VMungo0720G1652 Vigna mungo HOM05D000992 ORTHO05D001928 8.6e-35 150.6 134 60.4
Ca_10464_v3 Cicer arietinum L. HOM05D000992 ORTHO05D001928 1.1e-34 150.2 140 57.1
Phvul.007G144900 Phaseolus vulgaris HOM05D000992 ORTHO05D001928 1.1e-34 150.2 140 57.1
Ciclev10031766m.g Citrus clementina HOM05D000992 ORTHO05D001928 1.5e-34 149.8 140 57.9
CANSAT56G3856 Cannabis sativa HOM05D000992 ORTHO05D001928 1.9e-34 149.4 139 60.4
MD02G1241000 Malus domestica HOM05D000992 ORTHO05D001928 2.5e-34 149.1 143 58.0
Sc09g0005820 Simmondsia chinensis HOM05D000992 ORTHO05D001928 5.6e-34 147.9 131 56.5
TPR.G37753 Trifolium pratense HOM05D000992 ORTHO05D001928 9.6e-34 147.1 134 58.2
Manes.10G053800 Manihot esculenta HOM05D000992 ORTHO05D001928 2.1e-33 146.0 137 56.9
Psat6g174200 Pisum sativum HOM05D000992 ORTHO05D001928 2.1e-33 146.0 138 55.8
Thecc.10G092300 Theobroma cacao HOM05D000992 ORTHO05D001928 2.8e-33 145.6 135 58.5
CsaV3_2G032800 Cucumis sativus L. HOM05D000992 ORTHO05D001928 3.6e-33 145.2 131 58.8
TPR.G33941 Trifolium pratense HOM05D000992 ORTHO05D001928 3.6e-33 145.2 134 58.2
PGR142G0912 Punica granatum HOM05D000992 ORTHO05D001928 4.7e-33 144.8 133 58.6
TWI63G1207 Tripterygium wilfordii HOM05D000992 ORTHO05D001928 4.7e-33 144.8 140 59.3
SGA_v2.0_scaffold62G21359 Striga asiatica HOM05D000992 ORTHO05D001928 6.2e-33 144.4 134 60.4
Aqoxy1G01026 Aquilegia oxysepala HOM05D000992 ORTHO05D001928 1.1e-32 143.7 130 59.2
CSS0034951 Camellia sinensis var. sinensis HOM05D000992 ORTHO05D001928 1.1e-32 143.7 131 61.8
PSO063G5536 Papaver somniferum HOM05D000992 ORTHO05D001928 2.4e-32 142.5 130 60.0
Rhsim03G0110600 Rhododendron simsii HOM05D000992 ORTHO05D001928 2.4e-32 142.5 146 55.5
Medtr1g090873 Medicago truncatula HOM05D000992 ORTHO05D001928 3.1e-32 142.1 140 55.7
PSO339G4494 Papaver somniferum HOM05D000992 ORTHO05D001928 3.1e-32 142.1 130 60.0
unitig_748.g8778 Utricularia gibba HOM05D000992 ORTHO05D001928 3.1e-32 142.1 134 56.7
Gohir.A01G129000 Gossypium hirsutum HOM05D000992 ORTHO05D001928 5.8e-31 137.9 131 56.5
Eucgr.G02726 Eucalyptus grandis HOM05D000992 ORTHO05D001928 2.2e-30 136.0 129 55.8
Gohir.D01G118600 Gossypium hirsutum HOM05D000992 ORTHO05D001928 2.2e-30 136.0 131 55.7
Gorai.002G144700 Gossypium raimondii HOM05D000992 ORTHO05D001928 2.2e-30 136.0 131 55.7
Hund17787 Selenicereus undatus HOM05D000992 ORTHO05D001928 1.4e-29 133.3 129 55.8
AUR62030163 Chenopodium quinoa HOM05D000992 ORTHO05D001928 1.2e-28 130.2 130 55.4
THA.LOC104800563 Tarenaya hassleriana HOM05D000992 ORTHO05D001928 1.2e-28 130.2 133 55.6
AUR62002704 Chenopodium quinoa HOM05D000992 ORTHO05D001928 4.6e-28 128.3 130 55.4
MELO3C019856.2 Cucumis melo HOM05D000992 ORTHO05D001928 7.8e-28 127.5 157 47.8
QL04p040209 Quercus lobata HOM05D000992 ORTHO05D001928 7.8e-28 127.5 152 50.7
CSS0013481 Camellia sinensis var. sinensis HOM05D000992 ORTHO05D001928 3.0e-27 125.6 130 56.2
Hma1.2p1_0670F.1_g200425 Hydrangea macrophylla HOM05D000992 ORTHO05D001928 3.0e-27 125.6 81 75.3
COL.COLO4_08797 Corchorus olitorius HOM05D000992 ORTHO05D001928 4.3e-26 121.7 138 50.7
Thhalv10010438m.g Eutrema salsugineum HOM05D000992 ORTHO05D001928 7.3e-26 120.9 131 52.7
GSVIVG01034664001 Vitis vinifera HOM05D000992 ORTHO05D001928 7.3e-26 120.9 89 68.5
A09p45250 Brassica napus HOM05D000992 ORTHO05D006704 4.8e-25 118.2 131 53.4
BraA09t39988Z Brassica rapa HOM05D000992 ORTHO05D001928 4.8e-25 118.2 131 53.4
AT3G52190 Arabidopsis thaliana HOM05D000992 ORTHO05D001928 6.2e-25 117.9 133 51.1
BcaB02g08584 Brassica carinata HOM05D000992 ORTHO05D006704 6.2e-25 117.9 133 54.1
BcaC07g39588 Brassica carinata HOM05D000992 ORTHO05D001928 6.2e-25 117.9 131 53.4
C08p27430 Brassica napus HOM05D000992 ORTHO05D006704 6.2e-25 117.9 131 53.4
BolC8t50361H Brassica oleracea HOM05D000992 ORTHO05D001928 6.2e-25 117.9 131 52.7
Eucgr.J01031 Eucalyptus grandis HOM05D000992 ORTHO05D001928 6.2e-25 117.9 134 49.3
Sp5g10080 Schrenkiella parvula HOM05D000992 ORTHO05D001928 8.1e-25 117.5 131 52.7
AL5G32770 Arabidopsis lyrata HOM05D000992 ORTHO05D001928 1.1e-24 117.1 133 50.4
Carub.0005s1855 Capsella rubella HOM05D000992 ORTHO05D001928 1.1e-24 117.1 133 51.1
C04p40750 Brassica napus HOM05D000992 ORTHO05D006704 1.8e-24 116.3 132 54.5
BolC4t25658H Brassica oleracea HOM05D000992 ORTHO05D001928 1.8e-24 116.3 132 54.5
Aa31LG10G7290 Aethionema arabicum HOM05D000992 ORTHO05D001928 3.1e-24 115.5 134 52.2
EL10Ac8g19649 Beta vulgaris HOM05D000992 ORTHO05D001928 4.0e-24 115.2 128 49.2
THA.LOC104824538 Tarenaya hassleriana HOM05D000992 ORTHO05D001928 5.3e-24 114.8 142 51.4
HPP92_018839 Vanilla planifolia HOM05D000992 ORTHO05D001928 5.3e-24 114.8 128 50.0
A04p07190 Brassica napus HOM05D000992 ORTHO05D006704 2.0e-23 112.8 132 53.0
BraA04t16415Z Brassica rapa HOM05D000992 ORTHO05D006704 2.0e-23 112.8 132 53.0
Zm00001eb302280 Zea mays HOM05D000992 ORTHO05D001928 4.5e-23 111.7 149 42.3
Oeu059838.1 Olea europaea HOM05D000992 ORTHO05D001928 1.3e-22 110.2 86 67.4
Lj3A934G28 Lonicera japonica HOM05D000992 ORTHO05D001928 3.8e-22 108.6 81 65.4
Oeu032437.1 Olea europaea HOM05D000992 ORTHO05D001928 6.4e-22 107.8 89 66.3
ATR0665G575 Amborella trichopoda HOM05D000992 ORTHO05D001928 8.4e-22 107.5 128 48.4
Os07g0187700 Oryza sativa ssp. japonica HOM05D000992 ORTHO05D001928 3.2e-21 105.5 133 43.6
Os03g0799900 Oryza sativa ssp. japonica HOM05D000992 ORTHO05D001928 3.5e-20 102.1 134 39.6
PGSC0003DMG400019005 Solanum tuberosum HOM05D000992 ORTHO05D001928 3.5e-20 102.1 134 45.5
Zm00001eb061140 Zea mays HOM05D000992 ORTHO05D001928 8.1e-17 90.9 147 38.8
Ah.14g086360 Amaranthus hybridus HOM05D000992 ORTHO05D001928 6.9e-16 87.8 136 41.2
CARHR161950 Cardamine hirsuta HOM05D000992 ORTHO05D001928 6.9e-16 87.8 79 57.0
SEGI_21673 Sequoiadendron giganteum HOM05D000992 ORTHO05D001928 3.2e-13 79.0 142 37.3
BcaC02g09273 Brassica carinata HOM05D000992 ORTHO05D006704 1.8e-11 73.2 86 52.3
Duzib174G0004 Durio zibethinus HOM05D000992 ORTHO05D001928 3.9e-11 72.0 47 68.1
Mapoly0068s0040 Marchantia polymorpha HOM05D000992 ORTHO05D001928 1.5e-10 70.1 107 38.3
Pp3c3_15480 Physcomitrium patens HOM05D000992 ORTHO05D001928 1.5e-10 70.1 100 40.0
Pp3c13_12620 Physcomitrium patens HOM05D000992 ORTHO05D001928 4.3e-10 68.6 107 43.0
arahy.Tifrunner.gnm1.ann1.G1CRI5 Arachis hypogaea HOM05D000992 ORTHO05D001928 5.6e-10 68.2 49 59.2
Mapoly0009s0085 Marchantia polymorpha HOM05D000992 ORTHO05D001928 5.6e-10 68.2 97 41.2
QL11p050299 Quercus lobata HOM05D000992 ORTHO05D001928 1.8e-08 63.2 110 37.3
arahy.Tifrunner.gnm1.ann1.5WQ1I2 Arachis hypogaea HOM05D000992 ORTHO05D001928 2.4e-08 62.8 65 49.2
CsaV3_5G013310 Cucumis sativus L. HOM05D000992 ORTHO05D001928 3.1e-08 62.4 110 36.4
ClCG11G001240 Citrullus lanatus HOM05D000992 ORTHO05D001928 4.0e-08 62.0 145 32.4
arahy.Tifrunner.gnm1.ann1.B62L7G Arachis hypogaea HOM05D000992 ORTHO05D001928 6.9e-08 61.2 47 57.4
AagrBONN_evm.TU.Sc2ySwM_117.3128 Anthoceros agrestis HOM05D000992 ORTHO05D001928 9.0e-08 60.8 104 38.5
MD13G1024400 Malus domestica HOM05D000992 ORTHO05D001928 1.2e-07 60.5 107 38.3
arahy.Tifrunner.gnm1.ann1.Z4W0L1 Arachis hypogaea HOM05D000992 ORTHO05D001928 1.5e-07 60.1 43 62.8
Pp3c21_8000 Physcomitrium patens HOM05D000992 ORTHO05D001928 1.5e-07 60.1 106 34.9
arahy.Tifrunner.gnm1.ann1.F8MW8X Arachis hypogaea HOM05D000992 ORTHO05D001928 2.0e-07 59.7 44 59.1
MD16G1027100 Malus domestica HOM05D000992 ORTHO05D001928 2.6e-07 59.3 107 37.4
RcHm_v2.0_Chr4g0441451 Rosa chinensis HOM05D000992 ORTHO05D001928 3.4e-07 58.9 128 33.6
SGA_v2.0_scaffold39G15183 Striga asiatica HOM05D000992 ORTHO05D001928 3.4e-07 58.9 106 40.6
Manes.17G077900 Manihot esculenta HOM05D000992 ORTHO05D001928 7.6e-07 57.8 110 35.5
ATR0579G172 Amborella trichopoda HOM05D000992 ORTHO05D001928 1.0e-06 57.4 110 36.4
EL10Ac1g00687 Beta vulgaris HOM05D000992 ORTHO05D001928 1.0e-06 57.4 108 37.0
HanXRQChr11g0320951 Helianthus annuus HOM05D000992 ORTHO05D001928 1.0e-06 57.4 108 37.0
Manes.15G128400 Manihot esculenta HOM05D000992 ORTHO05D001928 1.3e-06 57.0 110 35.5
arahy.Tifrunner.gnm1.ann1.FYKT6P Arachis hypogaea HOM05D000992 ORTHO05D001928 1.7e-06 56.6 110 34.5
MD08G1204700 Malus domestica HOM05D000992 ORTHO05D001928 1.7e-06 56.6 105 37.1
Sp2g12920 Schrenkiella parvula HOM05D000992 ORTHO05D001928 2.2e-06 56.2 97 41.2
Aqoxy7G00061 Aquilegia oxysepala HOM05D000992 ORTHO05D001928 2.9e-06 55.8 110 35.5
ECA232G2145 Erigeron canadensis HOM05D000992 ORTHO05D001928 2.9e-06 55.8 110 37.3
Pp3c22_1410 Physcomitrium patens HOM05D000992 ORTHO05D001928 2.9e-06 55.8 107 33.6
TWI75G1486 Tripterygium wilfordii HOM05D000992 ORTHO05D001928 2.9e-06 55.8 110 33.6
arahy.Tifrunner.gnm1.ann1.MZBU3F Arachis hypogaea HOM05D000992 ORTHO05D001928 3.8e-06 55.5 118 30.5
Ah.05g177390 Amaranthus hybridus HOM05D000992 ORTHO05D001928 4.9e-06 55.1 141 34.8
CiPaw.06G011200 Carya illinoinensis HOM05D000992 ORTHO05D001928 4.9e-06 55.1 110 33.6
PSO017G5972 Papaver somniferum HOM05D000992 ORTHO05D001928 4.9e-06 55.1 113 33.6
TWI31G0575 Tripterygium wilfordii HOM05D000992 ORTHO05D001928 4.9e-06 55.1 111 34.2
PGR119G0308 Punica granatum HOM05D000992 ORTHO05D001928 6.5e-06 54.7 108 35.2
SEGI_28359 Sequoiadendron giganteum HOM05D000992 ORTHO05D001928 6.5e-06 54.7 108 34.3
unitig_22.g5587 Utricularia gibba HOM05D000992 ORTHO05D001928 6.5e-06 54.7 105 38.1
Nitab4.5_0000441g0190 Nicotiana tabacum HOM05D000992 ORTHO05D001928 8.4e-06 54.3 108 33.3
PSO478G1659 Papaver somniferum HOM05D000992 ORTHO05D001928 8.4e-06 54.3 112 33.9


User provided reference genes

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