Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402026514 Solanum tuberosum HOM05D003731 ORTHO05D004429 1.5e-74 282.7 137 100.0
PGSC0003DMG401026514 Solanum tuberosum HOM05D003731 ORTHO05D004429 3.2e-61 238.4 118 100.0
Solyc06g063290.3 Solanum lycopersicum HOM05D003731 ORTHO05D004429 2.7e-60 235.3 118 98.3
Sopen06g022750 Solanum pennellii HOM05D003731 ORTHO05D004429 1.3e-59 233.0 116 98.3
CAN.G308.12 Capsicum annuum HOM05D003731 ORTHO05D004429 6.9e-56 220.7 118 91.5
Nitab4.5_0002354g0040 Nicotiana tabacum HOM05D003731 ORTHO05D004429 7.6e-55 217.2 118 89.8
Cc04_g00280 Coffea canephora HOM05D003731 ORTHO05D004429 6.5e-54 214.2 118 89.8
Nitab4.5_0003757g0080 Nicotiana tabacum HOM05D003731 ORTHO05D004429 3.2e-53 211.8 121 88.4
GSVIVG01029573001 Vitis vinifera HOM05D003731 ORTHO05D004429 4.2e-53 211.5 118 85.6
MSTRG.22505 Avicennia marina HOM05D003731 ORTHO05D004429 9.3e-53 210.3 118 85.6
DCAR_022617 Daucus carota HOM05D003731 ORTHO05D004429 9.3e-53 210.3 118 86.4
Manes.16G046301 Manihot esculenta HOM05D003731 ORTHO05D004429 1.2e-52 209.9 118 85.6
Potri.008G006400 Populus trichocarpa HOM05D003731 ORTHO05D004429 1.2e-52 209.9 118 85.6
Cfa002143 Carpinus fangiana HOM05D003731 ORTHO05D004429 2.1e-52 209.1 118 87.3
Nitab4.5_0006975g0010 Nicotiana tabacum HOM05D003731 ORTHO05D004429 2.1e-52 209.1 118 83.9
Sabra08G0003400 Salix brachista HOM05D003731 ORTHO05D004429 2.1e-52 209.1 118 84.7
QL05p083882 Quercus lobata HOM05D003731 ORTHO05D004429 2.7e-52 208.8 116 88.8
Eucgr.F04024 Eucalyptus grandis HOM05D003731 ORTHO05D004429 4.6e-52 208.0 118 87.3
Oeu001813.1 Olea europaea HOM05D003731 ORTHO05D004429 6.0e-52 207.6 118 84.7
Lalb_Chr01g0011841 Lupinus albus HOM05D003731 ORTHO05D004429 1.3e-51 206.5 118 84.7
Actinidia31131 Actinidia chinensis HOM05D003731 ORTHO05D004429 1.8e-51 206.1 116 85.3
CiPaw.01G089700 Carya illinoinensis HOM05D003731 ORTHO05D004429 1.8e-51 206.1 118 85.6
Migut.I01187 Erythranthe guttata HOM05D003731 ORTHO05D004429 2.3e-51 205.7 118 84.7
Glyma.07G020600 Glycine max HOM05D003731 ORTHO05D004429 2.3e-51 205.7 118 86.4
Glyma.08G221400 Glycine max HOM05D003731 ORTHO05D004429 2.3e-51 205.7 118 86.4
Dinv20345 Davidia involucrata HOM05D003731 ORTHO05D008196 3.0e-51 205.3 115 86.1
RcHm_v2.0_Chr2g0149681 Rosa chinensis HOM05D003731 ORTHO05D004429 3.9e-51 204.9 115 87.8
AL1G59450 Arabidopsis lyrata HOM05D003731 ORTHO05D004429 5.1e-51 204.5 119 80.7
Dinv37787 Davidia involucrata HOM05D003731 ORTHO05D004429 5.1e-51 204.5 118 83.9
VMungo0647G1366 Vigna mungo HOM05D003731 ORTHO05D004429 8.7e-51 203.8 118 85.6
CANSAT01G0693 Cannabis sativa HOM05D003731 ORTHO05D004429 1.1e-50 203.4 119 84.0
Phvul.008G254200 Phaseolus vulgaris HOM05D003731 ORTHO05D004429 1.1e-50 203.4 118 84.7
Hund05680 Selenicereus undatus HOM05D003731 ORTHO05D004429 1.5e-50 203.0 118 83.1
Haze_16281 Corylus avellana HOM05D003731 ORTHO05D004429 1.9e-50 202.6 111 89.2
FAN09G0689 Fragaria x ananassa HOM05D003731 ORTHO05D004429 1.9e-50 202.6 115 86.1
Potri.010G252300 Populus trichocarpa HOM05D003731 ORTHO05D004429 1.9e-50 202.6 118 82.2
Ca_20505_v3 Cicer arietinum L. HOM05D003731 ORTHO05D004429 2.5e-50 202.2 118 85.6
Prupe.3G020500 Prunus persica HOM05D003731 ORTHO05D004429 2.5e-50 202.2 115 87.0
TWI12G0642 Tripterygium wilfordii HOM05D003731 ORTHO05D004429 2.5e-50 202.2 117 82.9
Lj3g0007083 Lotus japonicus HOM05D003731 ORTHO05D004429 3.3e-50 201.8 118 83.1
Rhsim08G0249300 Rhododendron simsii HOM05D003731 ORTHO05D004429 3.3e-50 201.8 118 83.1
Sed0015920 Sechium edule HOM05D003731 ORTHO05D004429 3.3e-50 201.8 118 85.6
Hma1.2p1_0517F.1_g170700 Hydrangea macrophylla HOM05D003731 ORTHO05D004429 4.3e-50 201.4 116 85.3
Medtr4g007990 Medicago truncatula HOM05D003731 ORTHO05D004429 5.7e-50 201.1 118 85.6
CARHR041710 Cardamine hirsuta HOM05D003731 ORTHO05D004429 7.4e-50 200.7 118 80.5
FvH4_6g37120 Fragaria vesca HOM05D003731 ORTHO05D004429 7.4e-50 200.7 115 86.1
FAN02G2868 Fragaria x ananassa HOM05D003731 ORTHO05D004429 7.4e-50 200.7 115 86.1
FAN14G5835 Fragaria x ananassa HOM05D003731 ORTHO05D004429 7.4e-50 200.7 115 86.1
THA.LOC104817922 Tarenaya hassleriana HOM05D003731 ORTHO05D004429 7.4e-50 200.7 119 82.4
TPR.G24561 Trifolium pratense HOM05D003731 ORTHO05D004429 9.7e-50 200.3 118 85.6
MELO3C024281.2 Cucumis melo HOM05D003731 ORTHO05D004429 1.3e-49 199.9 118 83.9
CsaV3_7G033680 Cucumis sativus L. HOM05D003731 ORTHO05D004429 1.3e-49 199.9 118 83.9
Duzib235G1293 Durio zibethinus HOM05D003731 ORTHO05D004429 2.2e-49 199.1 118 81.4
Nitab4.5_0001691g0190 Nicotiana tabacum HOM05D003731 ORTHO05D004429 2.2e-49 199.1 118 81.4
PGR102G1715 Punica granatum HOM05D003731 ORTHO05D004429 2.2e-49 199.1 112 83.9
AUR62001353 Chenopodium quinoa HOM05D003731 ORTHO05D004429 3.7e-49 198.4 118 82.2
MD09G1161400 Malus domestica HOM05D003731 ORTHO05D004429 3.7e-49 198.4 115 85.2
A01p33720 Brassica napus HOM05D003731 ORTHO05D004429 4.8e-49 198.0 118 81.4
C01p43100 Brassica napus HOM05D003731 ORTHO05D004429 4.8e-49 198.0 118 81.4
Lj5A23G26 Lonicera japonica HOM05D003731 ORTHO05D004429 4.8e-49 198.0 119 84.0
THA.LOC104798773 Tarenaya hassleriana HOM05D003731 ORTHO05D004429 4.8e-49 198.0 118 80.5
AT1G51560 Arabidopsis thaliana HOM05D003731 ORTHO05D004429 6.3e-49 197.6 118 78.8
CSS0017795 Camellia sinensis var. sinensis HOM05D003731 ORTHO05D004429 6.3e-49 197.6 112 86.6
MD17G1147200 Malus domestica HOM05D003731 ORTHO05D004429 6.3e-49 197.6 115 85.2
Peaxi162Scf00207g01628 Petunia axillaris HOM05D003731 ORTHO05D004429 6.3e-49 197.6 106 91.5
Sp1g38210 Schrenkiella parvula HOM05D003731 ORTHO05D004429 6.3e-49 197.6 118 80.5
arahy.Tifrunner.gnm1.ann1.C9Z78F Arachis hypogaea HOM05D003731 ORTHO05D004429 8.2e-49 197.2 119 84.9
arahy.Tifrunner.gnm1.ann1.T57K28 Arachis hypogaea HOM05D003731 ORTHO05D004429 8.2e-49 197.2 119 84.9
Gohir.D02G107500 Gossypium hirsutum HOM05D003731 ORTHO05D004429 8.2e-49 197.2 118 81.4
Gorai.005G122100 Gossypium raimondii HOM05D003731 ORTHO05D004429 8.2e-49 197.2 118 81.4
vmacro18751 Vaccinium macrocarpon HOM05D003731 ORTHO05D004429 8.2e-49 197.2 118 82.2
COL.COLO4_31180 Corchorus olitorius HOM05D003731 ORTHO05D004429 1.1e-48 196.8 117 79.5
BcaC09g49052 Brassica carinata HOM05D003731 ORTHO05D004429 1.4e-48 196.4 118 80.5
AUR62025651 Chenopodium quinoa HOM05D003731 ORTHO05D004429 1.4e-48 196.4 118 81.4
HanXRQChr02g0032091 Helianthus annuus HOM05D003731 ORTHO05D004429 1.4e-48 196.4 111 85.6
TWI18G0412 Tripterygium wilfordii HOM05D003731 ORTHO05D004429 1.4e-48 196.4 118 79.7
C03p51470 Brassica napus HOM05D003731 ORTHO05D004429 1.8e-48 196.1 118 79.7
BraA01t03485Z Brassica rapa HOM05D003731 ORTHO05D004429 1.8e-48 196.1 118 80.5
FAN05G3538 Fragaria x ananassa HOM05D003731 ORTHO05D004429 2.4e-48 195.7 110 88.2
BcaB06g26184 Brassica carinata HOM05D003731 ORTHO05D004429 3.1e-48 195.3 118 80.5
BcaC05g28253 Brassica carinata HOM05D003731 ORTHO05D004429 3.1e-48 195.3 118 80.5
A03p42050 Brassica napus HOM05D003731 ORTHO05D004429 3.1e-48 195.3 118 80.5
A05p27580 Brassica napus HOM05D003731 ORTHO05D004429 3.1e-48 195.3 118 80.5
C05p42680 Brassica napus HOM05D003731 ORTHO05D004429 3.1e-48 195.3 118 80.5
BolC5t32990H Brassica oleracea HOM05D003731 ORTHO05D004429 3.1e-48 195.3 118 80.5
Carub.0001s4041 Capsella rubella HOM05D003731 ORTHO05D004429 3.1e-48 195.3 118 77.1
BcaC01g03525 Brassica carinata HOM05D003731 ORTHO05D004429 4.1e-48 194.9 118 79.7
BolC3t17432H Brassica oleracea HOM05D003731 ORTHO05D004429 4.1e-48 194.9 118 79.7
BraA03t13359Z Brassica rapa HOM05D003731 ORTHO05D004429 4.1e-48 194.9 118 79.7
Hma1.2p1_1111F.1_g258350 Hydrangea macrophylla HOM05D003731 ORTHO05D004429 4.1e-48 194.9 112 83.9
Nn8g40740 Nelumbo nucifera HOM05D003731 ORTHO05D004429 4.1e-48 194.9 117 82.9
TAR625G0125 Trochodendron aralioides HOM05D003731 ORTHO05D004429 4.1e-48 194.9 117 82.9
AL3G35080 Arabidopsis lyrata HOM05D003731 ORTHO05D004429 5.3e-48 194.5 118 81.4
AT3G21140 Arabidopsis thaliana HOM05D003731 ORTHO05D004429 5.3e-48 194.5 118 81.4
EL10Ac7g18173 Beta vulgaris HOM05D003731 ORTHO05D004429 5.3e-48 194.5 118 79.7
BraA05t21647Z Brassica rapa HOM05D003731 ORTHO05D004429 6.9e-48 194.1 118 79.7
Thhalv10011555m.g Eutrema salsugineum HOM05D003731 ORTHO05D004429 6.9e-48 194.1 117 79.5
Gohir.D05G114600 Gossypium hirsutum HOM05D003731 ORTHO05D004429 6.9e-48 194.1 118 79.7
Gorai.009G118800 Gossypium raimondii HOM05D003731 ORTHO05D004429 6.9e-48 194.1 118 79.7
Lsat_1_v5_gn_1_39481 Lactuca sativa HOM05D003731 ORTHO05D004429 9.0e-48 193.7 113 82.3
BolC1t04257H Brassica oleracea HOM05D003731 ORTHO05D004429 1.2e-47 193.4 118 79.7
Peaxi162Scf00038g02535 Petunia axillaris HOM05D003731 ORTHO05D004429 1.5e-47 193.0 106 89.6
Aa31LG10G3210 Aethionema arabicum HOM05D003731 ORTHO05D004429 2.0e-47 192.6 118 79.7
Ciclev10025825m.g Citrus clementina HOM05D003731 ORTHO05D004429 2.0e-47 192.6 118 77.1
Thhalv10020874m.g Eutrema salsugineum HOM05D003731 ORTHO05D004429 2.0e-47 192.6 118 78.8
Gohir.A05G114300 Gossypium hirsutum HOM05D003731 ORTHO05D004429 2.0e-47 192.6 118 78.8
SGA_v2.0_scaffold71G23998 Striga asiatica HOM05D003731 ORTHO05D004429 2.0e-47 192.6 118 78.8
SGA_v2.0_scaffold122G33277 Striga asiatica HOM05D003731 ORTHO05D004429 2.6e-47 192.2 116 79.3
Lj9A542G26 Lonicera japonica HOM05D003731 ORTHO05D004429 3.4e-47 191.8 119 79.8
BcaB04g19144 Brassica carinata HOM05D003731 ORTHO05D004429 5.9e-47 191.0 118 79.7
Atru.chr1.2721 Acer truncatum HOM05D003731 ORTHO05D004429 1.0e-46 190.3 115 76.5
Ah.08g217760 Amaranthus hybridus HOM05D003731 ORTHO05D008196 1.0e-46 190.3 112 80.4
Sp3g19100 Schrenkiella parvula HOM05D003731 ORTHO05D004429 1.0e-46 190.3 119 78.2
Oeu050745.3 Olea europaea HOM05D003731 ORTHO05D004429 1.3e-46 189.9 118 80.5
ATR0626G101 Amborella trichopoda HOM05D003731 ORTHO05D004429 2.2e-46 189.1 117 78.6
PSO170G0363 Papaver somniferum HOM05D003731 ORTHO05D004429 1.1e-45 186.8 108 83.3
CDE05G0121 Ceratophyllum demersum HOM05D003731 ORTHO05D004429 1.9e-45 186.0 126 76.2
BcaB02g11256 Brassica carinata HOM05D003731 ORTHO05D004429 2.5e-45 185.7 115 76.5
CARHR097000 Cardamine hirsuta HOM05D003731 ORTHO05D004429 5.5e-45 184.5 119 79.0
Oeu049642.2 Olea europaea HOM05D003731 ORTHO05D004429 5.5e-45 184.5 118 78.0
PSO063G0738 Papaver somniferum HOM05D003731 ORTHO05D004429 5.5e-45 184.5 108 82.4
CDE05G0113 Ceratophyllum demersum HOM05D003731 ORTHO05D004429 9.4e-45 183.7 126 74.6
Aqoxy7G02835 Aquilegia oxysepala HOM05D003731 ORTHO05D004429 1.6e-44 183.0 117 77.8
A05p19510 Brassica napus HOM05D003731 ORTHO05D004429 2.1e-44 182.6 115 75.7
BraA05t20855Z Brassica rapa HOM05D003731 ORTHO05D004429 2.1e-44 182.6 115 75.7
HPP92_028311 Vanilla planifolia HOM05D003731 ORTHO05D004429 2.1e-44 182.6 110 79.1
BcaC08g43921 Brassica carinata HOM05D003731 ORTHO05D004429 2.7e-44 182.2 115 74.8
C06p13140 Brassica napus HOM05D003731 ORTHO05D004429 2.7e-44 182.2 115 74.8
BolC6t36470H Brassica oleracea HOM05D003731 ORTHO05D004429 2.7e-44 182.2 115 74.8
unitig_32.g11007 Utricularia gibba HOM05D003731 ORTHO05D004429 2.7e-44 182.2 115 77.4
MBI16_g05829_MAGBIO Magnolia biondii HOM05D003731 ORTHO05D004429 3.6e-44 181.8 105 82.9
Sabra10G0196300 Salix brachista HOM05D003731 ORTHO05D004429 3.6e-44 181.8 157 61.1
Aa31LG8G7840 Aethionema arabicum HOM05D003731 ORTHO05D004429 6.1e-44 181.0 118 72.9
Thecc.06G059900 Theobroma cacao HOM05D003731 ORTHO05D004429 6.1e-44 181.0 118 78.0
Duzib192G0075 Durio zibethinus HOM05D003731 ORTHO05D004429 5.1e-43 177.9 118 76.3
ECA234G1217 Erigeron canadensis HOM05D003731 ORTHO05D004429 6.7e-43 177.6 118 72.0
Os08g0517500 Oryza sativa ssp. japonica HOM05D003731 ORTHO05D004429 6.7e-43 177.6 107 79.4
SEGI_04052 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 8.8e-43 177.2 108 79.6
Os02g0148400 Oryza sativa ssp. japonica HOM05D003731 ORTHO05D004429 2.0e-42 176.0 113 76.1
ClCG09G001660 Citrullus lanatus HOM05D003731 ORTHO05D004429 5.7e-42 174.5 118 78.0
HanXRQChr10g0311171 Helianthus annuus HOM05D003731 ORTHO05D004429 5.7e-42 174.5 118 70.3
HPP92_010289 Vanilla planifolia HOM05D003731 ORTHO05D004429 1.3e-41 173.3 111 74.8
Lsat_1_v5_gn_5_137321 Lactuca sativa HOM05D003731 ORTHO05D004429 1.7e-41 172.9 117 70.1
SEGI_14249 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 2.2e-41 172.6 108 76.9
Zm00001eb035800 Zea mays HOM05D003731 ORTHO05D004429 3.7e-41 171.8 108 76.9
Zm00001eb232310 Zea mays HOM05D003731 ORTHO05D004429 4.8e-41 171.4 114 74.6
Lsat_1_v5_gn_8_80840 Lactuca sativa HOM05D003731 ORTHO05D004429 5.3e-40 167.9 110 72.7
BcaB04g20609 Brassica carinata HOM05D003731 ORTHO05D004429 5.9e-39 164.5 118 69.5
Cpa.g.sc461.2 Carica papaya HOM05D003731 ORTHO05D004429 9.4e-37 157.1 112 73.2
AagrBONN_evm.TU.Sc2ySwM_228.2381 Anthoceros agrestis HOM05D003731 ORTHO05D004429 1.8e-35 152.9 108 67.6
Mapoly0153s0003 Marchantia polymorpha HOM05D003731 ORTHO05D004429 3.0e-35 152.1 108 66.7
SMO364G0508 Selaginella moellendorffii HOM05D003731 ORTHO05D004429 3.0e-35 152.1 112 68.8
Pp3c19_5780 Physcomitrium patens HOM05D003731 ORTHO05D004429 6.7e-35 151.0 110 66.4
Hund18606 Selenicereus undatus HOM05D003731 ORTHO05D004429 2.0e-34 149.4 118 68.6
Carub.0003s2104 Capsella rubella HOM05D003731 ORTHO05D004429 2.2e-33 146.0 81 87.7
Sc12g0011120 Simmondsia chinensis HOM05D003731 ORTHO05D004429 2.2e-33 146.0 79 87.3
Pp3c18_21250 Physcomitrium patens HOM05D003731 ORTHO05D004429 3.7e-33 145.2 110 66.4
BcaNung05301 Brassica carinata HOM05D003731 ORTHO05D004429 8.2e-33 144.1 105 68.6
Gohir.A02G090300 Gossypium hirsutum HOM05D003731 ORTHO05D004429 3.1e-32 142.1 84 82.1
Ah.15g094360 Amaranthus hybridus HOM05D003731 ORTHO05D004429 9.1e-32 140.6 118 61.9
BcaC08g44499 Brassica carinata HOM05D003731 ORTHO05D004429 1.5e-31 139.8 77 87.0
C06p19510 Brassica napus HOM05D003731 ORTHO05D004429 1.5e-31 139.8 77 87.0
BraA02t08409Z Brassica rapa HOM05D003731 ORTHO05D004429 1.0e-30 137.1 77 85.7
SEGI_29649 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 1.8e-27 126.3 110 60.9
CBR_g66806 Chara braunii HOM05D003731 ORTHO05D004429 1.3e-25 120.2 116 55.2
HPP92_015382 Vanilla planifolia HOM05D003731 ORTHO05D004429 1.7e-25 119.8 76 77.6
arahy.Tifrunner.gnm1.ann1.7JFF3X Arachis hypogaea HOM05D003731 ORTHO05D004429 2.4e-24 115.9 119 58.8
CARHR113330 Cardamine hirsuta HOM05D003731 ORTHO05D004429 1.5e-13 80.1 63 63.5
PRCOL_00002787 Prasinoderma coloniale HOM05D003731 ORTHO05D004429 7.2e-13 77.8 117 33.3
MCO09G402 Micromonas commoda HOM05D003731 ORTHO05D004429 2.1e-12 76.3 138 35.5
Cre12.g520200 Chlamydomonas reinhardtii HOM05D003731 ORTHO05D004429 2.7e-12 75.9 91 42.9
HPP92_028546 Vanilla planifolia HOM05D003731 ORTHO05D004429 3.4e-10 68.9 37 78.4
MCO13G417 Micromonas commoda HOM05D003731 ORTHO05D004429 5.4e-08 61.6 91 38.5
Carub.0043s0002 Capsella rubella HOM05D003731 ORTHO05D004429 1.3e-06 57.0 66 54.5


User provided reference genes

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