Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 3.6e-188 661.4 326 100.0
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 4.6e-183 644.4 326 96.9
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 6.7e-182 640.6 326 96.6
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 2.7e-167 592.0 326 89.0
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 6.0e-167 590.9 329 88.4
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.8e-166 589.3 329 88.8
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 4.3e-165 584.7 329 87.2
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 1.8e-123 446.4 330 68.8
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 6.8e-118 427.9 329 64.7
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 1.5e-117 426.8 329 67.8
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.6e-117 426.0 329 64.1
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 5.7e-117 424.9 330 65.2
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 1.3e-116 423.7 329 66.3
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 5.9e-114 414.8 342 61.4
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 7.8e-114 414.5 329 64.7
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 7.8e-114 414.5 329 64.7
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 2.3e-110 402.9 327 60.6
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 6.8e-110 401.4 335 61.2
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 6.8e-110 401.4 329 60.8
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 2.0e-109 399.8 330 59.7
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 1.4e-107 393.7 337 59.6
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 5.4e-107 391.7 328 61.3
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 9.2e-107 391.0 331 58.9
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 3.5e-106 389.0 335 58.8
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.0e-105 387.5 329 57.4
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 1.0e-105 387.5 328 60.7
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 1.7e-105 386.7 329 57.4
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.3e-105 386.3 329 57.1
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 6.6e-105 384.8 330 59.4
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 1.1e-104 384.0 330 58.2
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 1.9e-104 383.3 329 57.8
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 3.3e-104 382.5 330 57.3
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 5.6e-104 381.7 331 61.3
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 1.2e-103 380.6 329 58.4
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 2.1e-103 379.8 336 58.3
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 6.2e-103 378.3 334 57.2
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 8.0e-103 377.9 326 59.2
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.1e-102 377.5 330 56.7
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 3.1e-102 375.9 330 56.4
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 6.8e-102 374.8 329 56.5
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.2e-101 374.0 302 62.3
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 1.2e-101 374.0 331 58.3
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 9.8e-101 370.9 331 55.6
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 9.8e-101 370.9 330 57.6
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 1.3e-100 370.5 334 57.8
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.7e-100 370.2 329 56.8
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 4.9e-100 368.6 330 57.3
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.9e-100 368.6 329 59.3
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 4.9e-100 368.6 330 56.1
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 6.4e-100 368.2 329 56.2
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.4e-99 367.1 328 55.5
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.9e-99 366.7 328 55.8
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 3.2e-99 365.9 326 55.5
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 4.1e-99 365.5 337 56.7
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 7.0e-99 364.8 330 55.8
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 9.2e-99 364.4 345 53.3
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 1.2e-98 364.0 327 55.0
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 2.7e-98 362.8 326 56.7
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 3.5e-98 362.5 329 58.1
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 4.6e-98 362.1 329 58.1
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.0e-97 360.9 329 55.0
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 3.0e-97 359.4 327 56.9
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 6.6e-97 358.2 329 56.2
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 8.6e-97 357.8 334 55.1
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.2e-95 354.0 327 56.9
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.8e-95 352.8 337 56.1
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.8e-95 352.8 337 56.1
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 8.1e-95 351.3 328 54.3
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 3.1e-94 349.4 338 53.8
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 1.5e-93 347.1 334 53.6
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 4.4e-93 345.5 328 55.5
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 7.5e-93 344.7 330 52.7
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 2.9e-92 342.8 335 53.4
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 3.7e-92 342.4 331 54.7
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 4.9e-92 342.0 328 54.9
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 2.4e-91 339.7 329 54.7
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.2e-91 339.3 337 54.9
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 1.6e-90 337.0 379 49.6
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 2.7e-90 336.3 295 56.9
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.7e-89 333.6 331 54.7
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.7e-89 333.6 331 54.7
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.3e-89 333.2 309 56.0
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 6.6e-89 331.6 302 57.9
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 3.3e-88 329.3 330 52.7
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 4.3e-88 328.9 329 51.7
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 9.5e-88 327.8 331 52.6
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 2.4e-86 323.2 292 55.8
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 1.7e-84 317.0 293 54.6
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 1.7e-81 307.0 338 51.2
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 3.0e-81 306.2 333 49.2
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.5e-80 303.9 277 57.0
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 4.4e-77 292.4 325 49.8
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 2.3e-73 280.0 331 48.9
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 1.3e-71 274.2 340 42.4
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 4.8e-71 272.3 333 49.2
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 1.4e-70 270.8 331 45.6
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 1.2e-69 267.7 267 50.2
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 3.4e-69 266.2 342 43.0
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 1.7e-68 263.8 378 41.3
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 4.2e-67 259.2 332 42.8
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 6.7e-65 251.9 260 51.2
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 5.6e-64 248.8 181 69.1
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 4.9e-60 235.7 215 56.3
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.6e-55 220.7 383 36.3
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.1e-55 220.3 383 36.8
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 1.0e-44 184.9 133 66.2
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.5e-44 182.2 166 59.0
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 6.7e-41 172.2 133 63.9
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.1e-35 154.8 131 55.0
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 6.1e-34 149.1 204 43.6
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 7.9e-34 148.7 114 64.0
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 3.9e-33 146.4 324 31.8
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 2.8e-31 140.2 117 59.8
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 6.3e-31 139.0 117 55.6
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 1.0e-25 121.7 86 66.3
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 1.8e-25 120.9 138 48.6
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 4.1e-22 109.8 97 52.6
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 7.0e-22 109.0 140 45.0
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.5e-16 91.3 123 41.5
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.6e-16 90.5 59 71.2
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 3.7e-15 86.7 322 26.4
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 7.0e-14 82.4 67 55.2
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 8.0e-10 68.9 104 38.5
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 1.2e-08 65.1 50 56.0
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 2.4e-06 57.4 45 55.6


User provided reference genes

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