Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.1e-271 939.5 516 100.0
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 4.5e-265 917.5 516 97.5
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 2.4e-263 911.8 516 96.7
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.3e-205 719.2 522 79.1
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.2e-198 696.8 465 81.5
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 6.0e-193 677.9 390 90.5
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 4.9e-187 658.3 527 72.1
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 7.5e-180 634.4 490 70.0
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 7.5e-180 634.4 473 74.0
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 3.2e-178 629.0 515 69.9
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 3.0e-176 622.5 525 66.3
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 6.8e-173 611.3 508 65.9
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.6e-169 600.1 471 67.9
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.0e-168 597.4 493 67.7
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 2.5e-167 592.8 485 66.4
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 1.6e-166 590.1 521 64.3
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 2.8e-166 589.3 524 63.5
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 1.4e-165 587.0 472 67.4
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 2.4e-165 586.3 472 67.4
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 1.6e-161 573.5 523 62.0
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 7.8e-161 571.2 509 63.3
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 1.3e-160 570.5 484 65.5
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 2.8e-158 562.8 472 65.9
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 4.8e-158 562.0 492 63.4
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 1.4e-157 560.5 493 64.7
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 2.4e-157 559.7 469 65.9
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 9.0e-157 557.8 523 63.1
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.2e-156 557.4 469 64.0
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.2e-156 557.4 476 63.9
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 2.0e-156 556.6 463 66.3
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 4.5e-156 555.4 504 60.3
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 5.8e-156 555.1 485 63.1
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 5.8e-156 555.1 518 59.7
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 1.7e-155 553.5 522 60.9
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 2.9e-155 552.7 522 62.1
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 3.2e-154 549.3 502 61.2
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 7.1e-154 548.1 527 60.5
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 9.3e-154 547.7 531 59.5
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 1.2e-153 547.4 527 60.5
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 2.1e-153 546.6 510 60.0
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 1.0e-152 544.3 522 59.4
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.3e-152 543.1 515 61.7
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.5e-151 540.4 518 57.9
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.6e-150 537.0 548 57.8
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 2.8e-150 536.2 513 59.5
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 3.7e-150 535.8 524 59.2
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 1.1e-149 534.3 517 60.2
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 1.1e-149 534.3 520 58.5
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 1.4e-149 533.9 506 61.5
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 2.4e-149 533.1 521 59.7
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 5.3e-149 531.9 513 59.6
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 6.9e-149 531.6 453 64.5
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 6.9e-149 531.6 521 57.0
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 1.2e-148 530.8 416 66.6
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 1.5e-148 530.4 521 58.5
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 3.4e-148 529.3 517 59.8
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 4.5e-148 528.9 472 62.5
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 2.2e-147 526.6 572 54.9
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 3.8e-147 525.8 391 69.3
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 3.2e-146 522.7 473 60.9
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 7.9e-145 518.1 431 64.7
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 1.8e-144 516.9 525 57.5
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 2.1e-142 510.0 519 58.4
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 1.8e-141 506.9 522 56.9
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 1.8e-141 506.9 472 59.5
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 3.4e-140 502.7 526 56.7
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 4.5e-140 502.3 453 63.1
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 8.4e-139 498.0 519 56.5
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 8.4e-139 498.0 519 56.5
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 1.1e-138 497.7 519 56.3
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 9.3e-138 494.6 473 58.1
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 2.1e-137 493.4 518 56.4
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.1e-137 493.4 470 59.6
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 2.7e-137 493.0 510 56.7
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 2.7e-137 493.0 515 55.9
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 3.5e-137 492.7 412 63.6
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.3e-136 490.7 413 63.4
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 1.3e-136 490.7 478 59.2
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 1.8e-136 490.3 516 56.6
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 1.5e-135 487.3 516 54.3
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 3.3e-135 486.1 539 54.4
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 1.3e-134 484.2 516 56.2
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 2.2e-134 483.4 512 55.1
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 6.3e-134 481.9 519 54.9
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 4.1e-133 479.2 526 53.2
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 4.1e-133 479.2 526 53.2
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 5.3e-133 478.8 533 53.7
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 2.6e-132 476.5 519 54.7
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 5.9e-132 475.3 409 61.4
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 7.7e-132 474.9 517 55.7
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 1.0e-131 474.6 477 57.7
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 3.8e-131 472.6 458 57.0
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 6.5e-131 471.9 524 54.4
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 9.4e-130 468.0 414 61.8
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 1.2e-129 467.6 408 62.3
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 1.6e-129 467.2 538 52.8
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 1.0e-128 464.5 533 53.1
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 4.8e-126 455.7 412 58.0
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 6.3e-126 455.3 427 58.8
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 6.9e-125 451.8 541 51.4
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 7.7e-124 448.4 471 52.7
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 1.7e-123 447.2 511 52.8
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 8.5e-123 444.9 389 60.9
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 2.7e-121 439.9 377 62.9
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 6.1e-121 438.7 364 64.6
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 5.1e-120 435.6 403 59.1
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 1.3e-118 431.0 395 58.7
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 4.8e-118 429.1 476 53.6
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 4.8e-110 402.5 548 46.0
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 8.2e-110 401.7 401 57.9
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.1e-109 401.4 381 56.2
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 2.7e-105 386.7 360 61.1
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 8.8e-104 381.7 310 69.7
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 1.5e-103 380.9 530 46.0
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.2e-97 361.3 315 59.0
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 6.6e-91 339.0 489 41.5
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 2.5e-90 337.0 277 64.6
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 7.2e-90 335.5 277 64.6
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 1.6e-84 317.8 473 40.8
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 6.1e-81 305.8 308 56.2
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 6.1e-81 305.8 268 65.7
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.2e-79 301.6 290 54.1
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.4e-79 299.7 367 52.6
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 4.3e-74 283.1 232 62.1
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 8.9e-72 275.4 509 37.3
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 7.3e-66 255.8 322 52.5
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 1.1e-64 251.9 626 35.0
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 3.3e-58 230.3 478 37.0
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 1.8e-56 224.6 176 63.6
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 1.0e-51 208.8 158 72.2
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 4.3e-50 203.4 181 64.6
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 5.4e-45 186.4 162 63.0
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 4.8e-41 173.3 145 64.8
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 2.6e-31 141.0 110 65.5
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 6.5e-30 136.3 186 51.6
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 1.2e-28 132.1 255 40.0
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 1.1e-24 119.0 108 61.1
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 1.1e-24 119.0 108 61.1
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 3.4e-23 114.0 69 87.0
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 1.2e-20 105.5 198 38.9
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 3.5e-20 104.0 126 46.8
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 9.7e-18 95.9 87 63.2
CAN.G322.73 Capsicum annuum HOM05D004816 ORTHO05D006043 1.6e-17 95.1 64 90.6
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 2.8e-17 94.4 119 52.9
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 2.6e-15 87.8 108 52.8
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.7e-14 85.1 75 64.0
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 5.0e-14 83.6 70 65.7
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 4.2e-13 80.5 57 63.2
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 5.5e-13 80.1 102 52.0
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 9.4e-13 79.3 161 37.9
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 4.6e-12 77.0 106 38.7
CSS0012251 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D006043 3.3e-10 70.9 138 45.7
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 4.8e-09 67.0 155 34.2
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 4.8e-09 67.0 243 27.6
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 8.2e-09 66.2 160 34.4
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 4.5e-07 60.5 55 61.8


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