Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 3.6e-143 511.5 254 100.0
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 4.7e-143 511.1 254 99.6
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 1.1e-142 510.0 254 99.6
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 6.0e-130 467.6 282 84.0
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 1.3e-127 459.9 254 87.8
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 1.5e-125 453.0 254 86.6
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 1.5e-125 453.0 252 87.3
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 7.6e-125 450.7 251 86.9
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 7.6e-125 450.7 251 86.9
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 7.6e-125 450.7 254 87.0
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 9.9e-125 450.3 254 83.9
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 3.8e-124 448.4 264 83.3
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.9e-123 446.0 251 86.1
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 4.2e-123 444.9 255 86.7
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 4.2e-123 444.9 254 84.6
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 5.5e-123 444.5 251 85.7
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 9.3e-123 443.7 254 86.2
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 9.3e-123 443.7 254 85.8
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.2e-122 443.4 254 84.6
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 2.1e-122 442.6 250 84.4
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 2.1e-122 442.6 250 83.2
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 2.7e-122 442.2 254 83.1
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 3.5e-122 441.8 254 84.6
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 3.5e-122 441.8 254 84.6
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 4.6e-122 441.4 250 85.2
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 6.0e-122 441.0 255 85.5
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 6.0e-122 441.0 252 86.1
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 1.3e-121 439.9 254 82.3
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.3e-121 439.9 254 85.0
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.8e-121 439.5 250 84.4
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 2.3e-121 439.1 254 83.9
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 3.0e-121 438.7 255 84.7
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 3.0e-121 438.7 258 84.5
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 6.7e-121 437.6 255 83.9
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 6.7e-121 437.6 255 83.9
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 6.7e-121 437.6 254 84.3
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 1.1e-120 436.8 258 83.7
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 1.1e-120 436.8 250 82.8
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 1.5e-120 436.4 257 84.0
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 1.9e-120 436.0 251 85.3
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 2.5e-120 435.6 254 83.5
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 2.5e-120 435.6 254 82.7
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 3.3e-120 435.3 281 78.3
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 3.3e-120 435.3 254 83.5
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 4.3e-120 434.9 254 82.7
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 5.6e-120 434.5 250 82.8
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 5.6e-120 434.5 254 82.3
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 7.4e-120 434.1 254 82.7
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 1.6e-119 433.0 257 82.5
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 1.6e-119 433.0 254 83.9
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.1e-119 432.6 254 83.5
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 2.1e-119 432.6 254 83.5
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 2.1e-119 432.6 254 81.5
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 4.8e-119 431.4 254 82.3
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 4.8e-119 431.4 251 84.1
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 6.2e-119 431.0 254 83.9
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 6.2e-119 431.0 256 83.6
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 2.4e-118 429.1 254 81.9
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 3.1e-118 428.7 251 83.3
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 5.3e-118 427.9 256 83.2
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 6.9e-118 427.6 254 82.3
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 9.0e-118 427.2 258 82.2
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 1.2e-117 426.8 254 80.7
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 1.2e-117 426.8 254 81.1
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 1.5e-117 426.4 254 80.7
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 1.5e-117 426.4 254 81.5
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 2.0e-117 426.0 251 81.3
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.6e-117 425.6 275 78.2
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 3.4e-117 425.2 254 81.1
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 1.0e-116 423.7 259 81.9
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 1.3e-116 423.3 253 81.0
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 2.9e-116 422.2 254 81.1
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 2.9e-116 422.2 296 73.6
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 4.9e-116 421.4 256 80.1
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 1.9e-115 419.5 255 80.0
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 7.1e-115 417.5 256 82.8
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 1.2e-114 416.8 238 83.6
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 2.1e-114 416.0 256 82.4
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 1.8e-113 412.9 249 79.1
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 1.8e-113 412.9 251 78.5
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 2.1e-111 406.0 251 77.3
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 3.7e-111 405.2 225 84.4
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 8.2e-111 404.1 226 84.5
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 1.2e-109 400.2 251 76.5
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.4e-109 398.7 248 81.0
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 3.8e-108 395.2 232 81.9
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 3.8e-108 395.2 232 81.9
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 3.3e-104 382.1 255 74.5
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 4.8e-103 378.3 222 81.1
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 8.2e-103 377.5 250 74.8
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 1.1e-102 377.1 250 73.6
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.3e-100 370.2 254 74.8
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 2.9e-100 369.0 250 70.8
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 5.0e-100 368.2 280 70.4
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 3.2e-99 365.5 220 81.8
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 4.2e-99 365.2 251 73.7
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 1.6e-98 363.2 208 83.2
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 1.6e-98 363.2 211 82.9
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 2.1e-98 362.8 250 69.6
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 2.1e-98 362.8 453 47.5
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 3.6e-98 362.1 250 69.2
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 1.0e-97 360.5 256 72.7
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 9.7e-96 354.0 258 72.5
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 5.9e-93 344.7 210 85.2
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 1.3e-92 343.6 209 78.0
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 3.8e-92 342.0 250 66.4
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 6.5e-92 341.3 237 68.8
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 6.5e-92 341.3 194 85.1
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 3.0e-89 332.4 199 80.4
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 6.7e-89 331.3 249 69.1
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.1e-88 330.5 242 70.2
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.1e-88 330.5 254 71.3
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 9.7e-88 327.4 251 66.5
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.1e-86 323.9 268 65.3
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 1.9e-83 313.2 254 65.0
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 9.4e-83 310.8 250 61.6
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 2.1e-82 309.7 206 77.2
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 8.2e-79 297.7 272 61.0
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 2.4e-78 296.2 338 53.8
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 5.0e-76 288.5 161 88.2
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 6.5e-76 288.1 161 87.0
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 6.1e-74 281.6 208 69.7
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 1.7e-71 273.5 170 75.9
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 4.1e-70 268.9 228 54.8
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 9.1e-70 267.7 284 54.2
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 1.9e-67 260.0 230 53.0
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 6.3e-63 245.0 231 53.2
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 1.7e-60 236.9 206 61.2
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.9e-60 236.1 144 84.0
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 2.5e-59 233.0 173 69.9
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 8.0e-58 228.0 147 72.8
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 1.0e-44 184.5 116 75.9
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.3e-44 184.1 112 77.7
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.9e-43 180.3 254 48.4
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 1.2e-40 171.0 133 71.4
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 2.7e-37 159.8 91 79.1
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 8.1e-34 148.3 94 73.4
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 1.1e-33 147.9 174 48.3
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 4.1e-30 136.0 98 69.4
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.1e-14 84.7 53 75.5


User provided reference genes

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