Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 7.1e-278 959.9 467 100.0
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 7.6e-272 939.9 467 97.6
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 4.9e-271 937.2 467 97.4
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.3e-250 869.4 468 90.6
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.1e-243 846.3 471 87.7
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.4e-241 839.3 471 87.7
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 1.0e-228 796.6 451 87.1
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 2.4e-209 732.3 459 76.3
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 1.8e-204 716.1 465 74.4
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 6.8e-204 714.1 458 74.5
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.1e-201 706.8 456 75.0
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 1.8e-201 706.1 461 73.5
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 1.7e-199 699.5 458 73.4
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 2.3e-199 699.1 456 73.0
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 2.5e-198 695.7 466 71.2
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 4.3e-198 694.9 473 71.5
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 7.3e-198 694.1 460 71.7
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 2.1e-197 692.6 448 74.1
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 3.6e-197 691.8 466 71.7
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 6.1e-197 691.0 455 72.3
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 1.8e-196 689.5 466 71.0
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 1.2e-195 686.8 459 71.9
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 4.4e-195 684.9 458 72.1
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 5.8e-195 684.5 458 71.8
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 1.3e-194 683.3 458 71.8
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 2.2e-194 682.6 458 71.6
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 8.3e-194 680.6 461 71.8
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.9e-193 679.5 458 71.0
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 4.1e-193 678.3 464 69.6
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 5.4e-193 677.9 480 70.8
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 2.0e-192 676.0 448 72.1
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 2.7e-192 675.6 459 72.5
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 1.0e-191 673.7 462 71.0
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.7e-191 672.9 468 70.7
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 1.7e-191 672.9 453 72.6
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 6.6e-191 671.0 458 70.7
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.5e-190 669.1 464 71.8
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 9.5e-190 667.2 474 68.6
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.8e-189 665.6 459 70.4
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 1.4e-188 663.3 460 67.6
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 1.4e-188 663.3 460 70.0
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 1.8e-188 662.9 459 69.9
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 8.9e-188 660.6 459 69.1
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 8.3e-186 654.1 445 69.7
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.9e-185 652.9 432 71.5
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 7.3e-182 641.0 474 66.0
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 9.5e-182 640.6 466 66.3
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 3.6e-181 638.6 452 70.8
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 4.7e-181 638.3 461 65.9
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 6.2e-181 637.9 460 67.8
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.4e-180 636.7 438 71.2
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.4e-180 636.7 446 70.9
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 2.3e-180 636.0 463 67.0
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 9.9e-179 630.6 432 70.6
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 1.1e-177 627.1 430 68.8
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 1.4e-177 626.7 477 65.0
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 3.2e-177 625.5 428 69.6
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 9.2e-177 624.0 397 74.1
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 4.6e-176 621.7 472 64.8
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 6.0e-176 621.3 472 65.9
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.7e-175 619.8 485 63.1
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 8.6e-175 617.5 427 69.3
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 8.6e-175 617.5 428 69.6
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 5.6e-174 614.8 429 68.3
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 5.6e-174 614.8 462 65.4
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.6e-173 613.2 427 68.9
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 3.6e-173 612.1 431 67.7
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 4.7e-173 611.7 427 68.6
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 4.7e-173 611.7 427 68.6
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 4.7e-173 611.7 392 71.7
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 4.7e-173 611.7 427 67.9
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 6.2e-173 611.3 446 66.1
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 1.1e-172 610.5 366 78.1
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 3.1e-172 609.0 427 67.9
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 4.0e-172 608.6 427 68.1
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 5.2e-172 608.2 424 68.2
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 7.6e-171 604.4 430 66.7
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.9e-169 599.7 385 72.7
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 1.0e-167 594.0 466 62.7
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 1.7e-167 593.2 458 63.5
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 6.6e-167 591.3 443 67.3
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 1.9e-166 589.7 460 63.5
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 1.3e-165 587.0 466 63.3
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 2.8e-165 585.9 365 74.0
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 4.8e-165 585.1 432 66.2
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 6.2e-165 584.7 390 70.8
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 3.5e-160 568.9 392 69.9
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 7.8e-160 567.8 439 63.1
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 2.1e-157 559.7 439 61.5
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 2.2e-154 549.7 433 61.7
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 2.4e-153 546.2 468 59.8
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 1.4e-148 530.4 468 57.1
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 2.0e-147 526.6 333 74.5
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.1e-137 494.2 462 56.1
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 3.2e-137 492.7 371 62.8
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 2.9e-130 469.5 469 53.5
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.3e-114 417.5 298 69.5
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 4.4e-102 375.9 212 83.0
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 2.2e-101 373.6 455 44.8
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 9.4e-97 358.2 259 70.7
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.1e-92 344.7 449 43.4
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.8e-92 344.0 384 45.3
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 1.2e-88 331.3 221 73.3
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.5e-86 324.3 256 63.3
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 1.5e-81 307.8 321 53.3
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 5.1e-66 256.1 155 76.1
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 1.1e-63 248.4 261 49.8
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.4e-60 238.0 233 55.8
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 3.2e-60 236.9 147 76.2
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 8.4e-45 185.7 247 46.2
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.0e-29 135.6 131 52.7
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 7.4e-25 119.4 80 73.8
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 9.6e-25 119.0 135 53.3
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 9.6e-25 119.0 75 70.7
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 4.8e-24 116.7 121 52.1
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 1.5e-22 111.7 68 73.5
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 3.8e-21 107.1 102 56.9
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 7.2e-20 102.8 79 57.0
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 2.2e-13 81.3 106 48.1
Sopen01g045520 Solanum pennellii HOM05D000904 ORTHO05D005281 7.4e-09 66.2 62 59.7
Solyc01g103100.3 Solanum lycopersicum HOM05D000904 ORTHO05D005281 8.2e-08 62.8 62 56.5


User provided reference genes

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