Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 7.7e-37 156.8 86 100.0
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.8e-33 145.6 86 95.3
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 1.7e-31 139.0 87 92.0
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 1.1e-27 126.3 88 85.2
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 9.4e-27 123.2 82 85.4
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 1.2e-26 122.9 110 71.8
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 8.0e-26 120.2 86 83.7
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.3e-25 118.6 81 85.2
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 3.0e-25 118.2 86 81.4
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 3.3e-24 114.8 107 70.1
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 1.3e-23 112.8 107 69.2
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.8e-22 109.0 86 74.4
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 2.2e-20 102.1 86 69.8
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 2.5e-19 98.6 86 68.6
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 4.2e-19 97.8 86 68.6
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 9.4e-19 96.7 78 73.1
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 2.1e-18 95.5 86 67.4
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 1.0e-17 93.2 86 67.4
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 5.2e-17 90.9 81 69.1
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 8.8e-17 90.1 86 65.1
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 1.2e-16 89.7 81 67.9
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 6.3e-15 84.0 86 58.1
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 6.3e-15 84.0 86 58.1
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 5.4e-14 80.9 84 56.0
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 9.1e-14 80.1 101 53.5
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 2.0e-13 79.0 83 55.4
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 2.7e-13 78.6 83 63.9
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 2.7e-13 78.6 96 52.1
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 5.9e-13 77.4 72 66.7
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 7.7e-13 77.0 85 56.5
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.0e-12 76.6 88 48.9
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 1.3e-12 76.3 92 54.3
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.3e-12 76.3 85 51.8
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 1.7e-12 75.9 93 54.8
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 2.9e-12 75.1 85 55.3
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 3.8e-12 74.7 92 54.3
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 5.0e-12 74.3 88 48.9
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 8.6e-12 73.6 65 64.6
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 8.6e-12 73.6 102 49.0
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.9e-11 72.4 86 54.7
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 2.5e-11 72.0 86 48.8
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 3.3e-11 71.6 92 53.3
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 3.3e-11 71.6 82 51.2
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 4.2e-11 71.2 90 51.1
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 5.5e-11 70.9 82 54.9
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 5.5e-11 70.9 86 53.5
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 5.5e-11 70.9 90 51.1
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 1.2e-10 69.7 92 53.3
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 1.2e-10 69.7 86 52.3
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 1.6e-10 69.3 91 50.5
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 1.6e-10 69.3 101 48.5
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 2.1e-10 68.9 85 55.3
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 2.1e-10 68.9 89 47.2
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 2.8e-10 68.6 91 51.6
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 2.8e-10 68.6 92 52.2
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 3.6e-10 68.2 93 50.5
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 4.7e-10 67.8 81 49.4
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 6.1e-10 67.4 81 53.1
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 8.0e-10 67.0 90 51.1
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 8.0e-10 67.0 83 53.0
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 1.0e-09 66.6 85 50.6
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.4e-09 66.2 90 51.1
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 1.4e-09 66.2 89 46.1
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 1.8e-09 65.9 93 53.8
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 2.3e-09 65.5 85 50.6
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.3e-09 65.5 90 47.8
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 3.0e-09 65.1 94 48.9
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 3.0e-09 65.1 60 65.0
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 4.0e-09 64.7 94 48.9
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 4.0e-09 64.7 94 50.0
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 4.0e-09 64.7 45 71.1
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 5.2e-09 64.3 95 49.5
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 5.2e-09 64.3 101 49.5
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 5.2e-09 64.3 93 51.6
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 6.8e-09 63.9 64 57.8
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 6.8e-09 63.9 94 44.7
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 8.9e-09 63.5 90 50.0
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 8.9e-09 63.5 90 50.0
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 1.5e-08 62.8 95 47.4
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 1.5e-08 62.8 95 47.4
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 1.5e-08 62.8 61 59.0
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 1.5e-08 62.8 65 55.4
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 1.5e-08 62.8 73 53.4
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 2.6e-08 62.0 70 58.6
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 3.4e-08 61.6 92 51.1
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 3.4e-08 61.6 38 78.9
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 7.5e-08 60.5 73 56.2
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 7.5e-08 60.5 73 56.2
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 7.5e-08 60.5 73 56.2
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 1.3e-07 59.7 98 43.9
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 1.3e-07 59.7 73 52.1
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 1.7e-07 59.3 102 41.2
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 1.7e-07 59.3 98 42.9
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 2.2e-07 58.9 63 54.0
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 2.8e-07 58.5 45 64.4
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 2.8e-07 58.5 63 55.6
ClCG03G006550 Citrullus lanatus HOM05D006325 ORTHO05D007878 2.8e-07 58.5 93 43.0
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 2.8e-07 58.5 46 60.9
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 2.8e-07 58.5 46 60.9
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 2.8e-07 58.5 52 61.5
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 3.7e-07 58.2 72 52.8
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 3.7e-07 58.2 47 59.6
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 3.7e-07 58.2 91 46.2
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 4.9e-07 57.8 91 45.1
MBI18_g11235_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 6.3e-07 57.4 84 50.0
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 8.3e-07 57.0 89 42.7
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 8.3e-07 57.0 46 58.7
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 1.1e-06 56.6 88 45.5
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 1.8e-06 55.8 46 56.5
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 2.4e-06 55.5 90 45.6
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 5.4e-06 54.3 60 55.0
MBI02_g07020_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 9.2e-06 53.5 86 46.5


User provided reference genes

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