Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402022617 Solanum tuberosum HOM05D000274 ORTHO05D002552 1.6e-29 132.1 66 100.0
Solyc00g500023.1 Solanum lycopersicum HOM05D000274 ORTHO05D002552 2.7e-26 121.3 65 87.7
Solyc00g500070.1 Solanum lycopersicum HOM05D000274 ORTHO05D002552 1.3e-23 112.5 60 86.7
AL2G21640 Arabidopsis lyrata HOM05D000274 ORTHO05D002552 2.0e-21 105.1 62 79.0
CARHR282180 Cardamine hirsuta HOM05D000274 ORTHO05D002552 2.0e-21 105.1 62 79.0
ATCG00670 Arabidopsis thaliana HOM05D000274 ORTHO05D002552 2.7e-21 104.8 62 77.4
ECA074G0006 Erigeron canadensis HOM05D000274 ORTHO05D002552 3.5e-21 104.4 59 83.1
RcHm_v2.0_CPg0501991 Rosa chinensis HOM05D000274 ORTHO05D002552 3.5e-21 104.4 62 79.0
SalBow1G7090 Salvia bowleyana HOM05D000274 ORTHO05D002552 4.5e-21 104.0 62 77.4
EL10Ac5g13040 Beta vulgaris HOM05D000274 ORTHO05D002552 5.9e-21 103.6 62 77.4
EL10As12g24030 Beta vulgaris HOM05D000274 ORTHO05D002552 5.9e-21 103.6 62 77.4
CAN.G1739.8 Capsicum annuum HOM05D000274 ORTHO05D002552 5.9e-21 103.6 63 79.4
Cfa021574 Carpinus fangiana HOM05D000274 ORTHO05D002552 7.7e-21 103.2 62 75.8
PSO548G0031 Papaver somniferum HOM05D000274 ORTHO05D002552 7.7e-21 103.2 62 79.0
DCAR_032510 Daucus carota HOM05D000274 ORTHO05D002552 1.0e-20 102.8 61 80.3
Gohir.A05G285000 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.0e-20 102.8 62 77.4
Gohir.D01G102021 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.0e-20 102.8 62 77.4
LjContig00318g0024179 Lotus japonicus HOM05D000274 ORTHO05D002552 1.0e-20 102.8 62 75.8
BcaB02g11359 Brassica carinata HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
BcaC03g15273 Brassica carinata HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
BcaC07g42433 Brassica carinata HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
BNapus_Darmor_BZH_scaffold_287p00220 Brassica napus HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
C02p28700 Brassica napus HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
C02p43600 Brassica napus HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
C06p22930 Brassica napus HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
C06p23060 Brassica napus HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
BolSC29t60600H Brassica oleracea HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
BolSC35t60659H Brassica oleracea HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
BolSC46t61010H Brassica oleracea HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
BraSC138t45563Z Brassica rapa HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
Sc24g0000880 Simmondsia chinensis HOM05D000274 ORTHO05D002552 1.3e-20 102.4 62 77.4
RcHm_v2.0_Chr6g0260431 Rosa chinensis HOM05D000274 ORTHO05D002552 1.7e-20 102.1 62 77.4
Lsat_1_v5_gn_4_11460 Lactuca sativa HOM05D000274 ORTHO05D002552 2.3e-20 101.7 59 79.7
Lsat_1_v5_gn_9_50981 Lactuca sativa HOM05D000274 ORTHO05D002552 2.3e-20 101.7 59 79.7
PGR111G0023 Punica granatum HOM05D000274 ORTHO05D002552 2.3e-20 101.7 61 78.7
Gohir.D06G018300 Gossypium hirsutum HOM05D000274 ORTHO05D002552 2.9e-20 101.3 62 75.8
HanXRQChr00c0314g0573521 Helianthus annuus HOM05D000274 ORTHO05D002552 2.9e-20 101.3 59 79.7
HanXRQChr01g0020281 Helianthus annuus HOM05D000274 ORTHO05D002552 2.9e-20 101.3 59 79.7
HanXRQChr10g0283621 Helianthus annuus HOM05D000274 ORTHO05D002552 2.9e-20 101.3 59 79.7
HanXRQChr10g0284311 Helianthus annuus HOM05D000274 ORTHO05D002552 2.9e-20 101.3 59 79.7
HanXRQChr10g0289321 Helianthus annuus HOM05D000274 ORTHO05D002552 2.9e-20 101.3 59 79.7
HanXRQChr10g0318131 Helianthus annuus HOM05D000274 ORTHO05D002552 2.9e-20 101.3 59 79.7
HanXRQChr11g0326901 Helianthus annuus HOM05D000274 ORTHO05D002552 2.9e-20 101.3 59 79.7
HanXRQChr11g0345211 Helianthus annuus HOM05D000274 ORTHO05D002552 2.9e-20 101.3 59 79.7
HanXRQCPg0580111 Helianthus annuus HOM05D000274 ORTHO05D002552 2.9e-20 101.3 59 79.7
CAN.G219.29 Capsicum annuum HOM05D000274 ORTHO05D002552 3.8e-20 100.9 62 80.6
MELO3C027089.2 Cucumis melo HOM05D000274 ORTHO05D002552 3.8e-20 100.9 62 74.2
Gohir.A12G229201 Gossypium hirsutum HOM05D000274 ORTHO05D002552 3.8e-20 100.9 62 75.8
Gorai.009G282800 Gossypium raimondii HOM05D000274 ORTHO05D002552 3.8e-20 100.9 60 78.3
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 3.8e-20 100.9 62 74.2
Lalb_Chr07g0192041 Lupinus albus HOM05D000274 ORTHO05D002552 3.8e-20 100.9 62 74.2
SabraPtG0003900 Salix brachista HOM05D000274 ORTHO05D002552 3.8e-20 100.9 61 78.7
C04p42950 Brassica napus HOM05D000274 ORTHO05D002552 5.0e-20 100.5 62 75.8
BolC4t25865H Brassica oleracea HOM05D000274 ORTHO05D002552 5.0e-20 100.5 62 75.8
SalBow6G1627 Salvia bowleyana HOM05D000274 ORTHO05D002552 5.0e-20 100.5 62 74.2
HanXRQChr04g0095101 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-19 99.0 59 78.0
Sc02g0004580 Simmondsia chinensis HOM05D000274 ORTHO05D002552 1.5e-19 99.0 62 72.6
HanXRQChr04g0094301 Helianthus annuus HOM05D000274 ORTHO05D002552 1.9e-19 98.6 58 79.3
MBI14_g38260_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 1.9e-19 98.6 60 75.0
Nitab4.5_0010531g0050 Nicotiana tabacum HOM05D000274 ORTHO05D002552 1.9e-19 98.6 62 74.2
arahy.Tifrunner.gnm1.ann1.H8UXH3 Arachis hypogaea HOM05D000274 ORTHO05D002552 2.5e-19 98.2 61 73.8
C09p40540 Brassica napus HOM05D000274 ORTHO05D002552 2.5e-19 98.2 62 74.2
Sc09g0009710 Simmondsia chinensis HOM05D000274 ORTHO05D002552 2.5e-19 98.2 62 74.2
ATR0303G006 Amborella trichopoda HOM05D000274 ORTHO05D002552 3.3e-19 97.8 62 72.6
arahy.Tifrunner.gnm1.ann1.002YPW Arachis hypogaea HOM05D000274 ORTHO05D002552 3.3e-19 97.8 61 75.4
arahy.Tifrunner.gnm1.ann1.3I6E4U Arachis hypogaea HOM05D000274 ORTHO05D002552 3.3e-19 97.8 61 75.4
arahy.Tifrunner.gnm1.ann1.JE9GG4 Arachis hypogaea HOM05D000274 ORTHO05D002552 3.3e-19 97.8 61 75.4
arahy.Tifrunner.gnm1.ann1.KX9QRC Arachis hypogaea HOM05D000274 ORTHO05D002552 3.3e-19 97.8 61 75.4
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 3.3e-19 97.8 60 73.3
Phvul.002G090301 Phaseolus vulgaris HOM05D000274 ORTHO05D002552 3.3e-19 97.8 62 71.0
EL10Ac1g01444 Beta vulgaris HOM05D000274 ORTHO05D002552 4.2e-19 97.4 62 74.2
BraSC103t45477Z Brassica rapa HOM05D000274 ORTHO05D002552 4.2e-19 97.4 59 76.3
Gohir.D07G185750 Gossypium hirsutum HOM05D000274 ORTHO05D002552 7.2e-19 96.7 62 72.6
arahy.Tifrunner.gnm1.ann1.8S8FMR Arachis hypogaea HOM05D000274 ORTHO05D002552 9.5e-19 96.3 61 73.8
Sed0002260 Sechium edule HOM05D000274 ORTHO05D002552 9.5e-19 96.3 60 71.7
Sed0002969 Sechium edule HOM05D000274 ORTHO05D002552 9.5e-19 96.3 60 71.7
Sed0019404 Sechium edule HOM05D000274 ORTHO05D002552 9.5e-19 96.3 60 71.7
Sed0022936 Sechium edule HOM05D000274 ORTHO05D002552 9.5e-19 96.3 60 71.7
CAN.G702.46 Capsicum annuum HOM05D000743 ORTHO05D000580 1.2e-18 95.9 63 73.0
MBI13_g29602_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 3.6e-18 94.4 59 72.9
EL10As15g24108 Beta vulgaris HOM05D000274 ORTHO05D002552 4.7e-18 94.0 63 68.3
Gohir.D06G113800 Gossypium hirsutum HOM05D000274 ORTHO05D002552 4.7e-18 94.0 62 71.0
HanXRQChr02g0052561 Helianthus annuus HOM05D000274 ORTHO05D002552 1.0e-17 92.8 60 76.7
Nitab4.5_0005769g0060 Nicotiana tabacum HOM05D000274 ORTHO05D002552 1.0e-17 92.8 62 72.6
MBI06_g25326_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 1.4e-17 92.4 59 71.2
Gohir.D06G104800 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.8e-17 92.0 62 71.0
BolC7t41719H Brassica oleracea HOM05D000274 ORTHO05D002552 2.3e-17 91.7 62 67.7
Eucgr.I00671 Eucalyptus grandis HOM05D000274 ORTHO05D002552 2.3e-17 91.7 62 64.5
Gorai.010G129800 Gossypium raimondii HOM05D000274 ORTHO05D002552 2.3e-17 91.7 55 78.2
Ciclev10003424m.g Citrus clementina HOM05D000274 ORTHO05D002552 3.0e-17 91.3 61 68.9
HanXRQChr06g0177591 Helianthus annuus HOM05D000274 ORTHO05D002552 3.0e-17 91.3 59 71.2
Lsat_1_v5_gn_2_43961 Lactuca sativa HOM05D000274 ORTHO05D002552 4.0e-17 90.9 60 68.3
Lsat_1_v5_gn_4_118880 Lactuca sativa HOM05D000274 ORTHO05D002552 4.0e-17 90.9 59 71.2
MD11G1294400 Malus domestica HOM05D000274 ORTHO05D002552 4.0e-17 90.9 62 66.1
Gorai.010G140000 Gossypium raimondii HOM05D000274 ORTHO05D002552 5.2e-17 90.5 61 68.9
CAN.G648.4 Capsicum annuum HOM05D000274 ORTHO05D002552 6.8e-17 90.1 57 73.7
COL.COLO4_02977 Corchorus olitorius HOM05D000274 ORTHO05D002552 6.8e-17 90.1 60 65.0
COL.COLO4_03028 Corchorus olitorius HOM05D000274 ORTHO05D002552 6.8e-17 90.1 60 65.0
COL.COLO4_03061 Corchorus olitorius HOM05D000274 ORTHO05D002552 6.8e-17 90.1 60 65.0
COL.COLO4_04073 Corchorus olitorius HOM05D000274 ORTHO05D002552 6.8e-17 90.1 60 65.0
Lalb_Chr03g0038761 Lupinus albus HOM05D000274 ORTHO05D002552 8.9e-17 89.7 62 67.7
MBI16_g04458_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 8.9e-17 89.7 59 69.5
Gohir.A10G134850 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.2e-16 89.4 62 66.1
HanXRQChr00c0557g0575781 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-16 89.0 57 73.7
Gohir.D02G116125 Gossypium hirsutum HOM05D000274 ORTHO05D002552 3.4e-16 87.8 57 68.4
Glyma.20G048700 Glycine max HOM05D000274 ORTHO05D002552 4.4e-16 87.4 53 73.6
MBI18_g10796_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 4.4e-16 87.4 62 66.1
Medtr0002s0730 Medicago truncatula HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Zm00001eb039170 Zea mays HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Zm00001eb255900 Zea mays HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Zm00001eb434890 Zea mays HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Zm00001eb435080 Zea mays HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Zm00001eb435150 Zea mays HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Zm00001eb435370 Zea mays HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Zm00001eb437160 Zea mays HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Zm00001eb439970 Zea mays HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Zm00001eb440350 Zea mays HOM05D000274 ORTHO05D002552 4.4e-16 87.4 59 69.5
Gohir.1Z050580 Gossypium hirsutum HOM05D000274 ORTHO05D002552 5.7e-16 87.0 51 78.4
Gohir.D09G093050 Gossypium hirsutum HOM05D000274 ORTHO05D002552 5.7e-16 87.0 68 64.7
Gorai.002G264000 Gossypium raimondii HOM05D000274 ORTHO05D002552 7.5e-16 86.7 61 65.6
ATR1132G067 Amborella trichopoda HOM05D000274 ORTHO05D002552 1.7e-15 85.5 62 62.9
arahy.Tifrunner.gnm1.ann1.M2WIVZ Arachis hypogaea HOM05D000274 ORTHO05D002552 2.2e-15 85.1 62 66.1
SMO086G0017 Selaginella moellendorffii HOM05D000274 ORTHO05D002552 2.8e-15 84.7 60 61.7
Medtr4g034690 Medicago truncatula HOM05D000274 ORTHO05D002552 1.1e-14 82.8 59 62.7
Medtr4g077730 Medicago truncatula HOM05D000274 ORTHO05D002552 1.1e-14 82.8 59 62.7
Gohir.D01G217650 Gossypium hirsutum HOM05D000274 ORTHO05D002552 2.4e-14 81.6 61 62.3
EL10Ac1g01196 Beta vulgaris HOM05D000274 ORTHO05D002552 4.1e-14 80.9 62 66.1
QL93p0311_0006 Quercus lobata HOM05D000274 ORTHO05D002552 5.4e-14 80.5 45 80.0
Gorai.002G210500 Gossypium raimondii HOM05D000274 ORTHO05D002552 1.2e-13 79.3 59 64.4
BcaC02g09867 Brassica carinata HOM05D000274 ORTHO05D002552 2.7e-13 78.2 49 71.4
C04p35750 Brassica napus HOM05D000274 ORTHO05D002552 2.7e-13 78.2 49 71.4
BolC4t25226H Brassica oleracea HOM05D000274 ORTHO05D002552 2.7e-13 78.2 49 71.4
Gohir.D01G169088 Gossypium hirsutum HOM05D000274 ORTHO05D002552 5.9e-13 77.0 59 62.7
Psat0s1446g0160 Pisum sativum HOM05D000274 ORTHO05D002552 1.7e-12 75.5 59 54.2
Psat0s7142g0080 Pisum sativum HOM05D000274 ORTHO05D002552 1.7e-12 75.5 59 54.2
Hund10283 Selenicereus undatus HOM05D000274 ORTHO05D002552 3.9e-12 74.3 48 64.6
Hund27992 Selenicereus undatus HOM05D000274 ORTHO05D002552 3.9e-12 74.3 48 64.6
BolSC29t60479H Brassica oleracea HOM05D000274 ORTHO05D002552 1.1e-11 72.8 56 57.1
Hund27967 Selenicereus undatus HOM05D000274 ORTHO05D002552 4.3e-11 70.9 50 58.0
Lsat_1_v5_gn_5_50301 Lactuca sativa HOM05D000274 ORTHO05D002552 2.8e-10 68.2 45 68.9
Duzib026G0001 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib071G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib086G0003 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib124G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib125G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib162G0001 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib185G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib225G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib233G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib237G0004 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib252G0003 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib253G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Duzib275G0001 Durio zibethinus HOM05D000274 ORTHO05D002552 6.1e-10 67.0 55 52.7
Lj2P1234T105 Lonicera japonica HOM05D000274 ORTHO05D002552 1.8e-09 65.5 57 56.1
Lj2P1237T114 Lonicera japonica HOM05D000274 ORTHO05D002552 1.8e-09 65.5 57 56.1
Lj2P1239T87 Lonicera japonica HOM05D000274 ORTHO05D002552 1.8e-09 65.5 57 56.1
Hund12884 Selenicereus undatus HOM05D000274 ORTHO05D002552 2.3e-09 65.1 38 65.8
MBI14_g44884_MAGBIO Magnolia biondii HOM05D000537 ORTHO05D000415 3.1e-09 64.7 45 62.2
Gorai.013G004600 Gossypium raimondii HOM05D000274 ORTHO05D002552 4.0e-09 64.3 61 52.5
HPP92_028400 Vanilla planifolia HOM05D000274 ORTHO05D002552 9.8e-08 59.7 60 45.0
HPP92_028425 Vanilla planifolia HOM05D000274 ORTHO05D002552 9.8e-08 59.7 60 45.0
Lj1P1116T32 Lonicera japonica HOM05D000274 ORTHO05D002552 2.9e-07 58.2 58 48.3
Lj1P1119T62 Lonicera japonica HOM05D000274 ORTHO05D002552 4.9e-07 57.4 57 50.9
HPP92_022278 Vanilla planifolia HOM05D000274 ORTHO05D002552 4.1e-06 54.3 60 43.3
SMO239G0142 Selaginella moellendorffii HOM05D000274 ORTHO05D006929 5.4e-06 53.9 55 47.3
CDE02G2514 Ceratophyllum demersum HOM05D000274 ORTHO05D005803 7.0e-06 53.5 58 41.4
MBI03_g09363_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D005803 7.0e-06 53.5 61 41.0


User provided reference genes

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