Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402022238 Solanum tuberosum HOM05D009044 ORTHO05D011261 3.0e-51 204.9 105 100.0
Sopen10g006300 Solanum pennellii HOM05D009044 ORTHO05D011261 4.3e-50 201.1 105 98.1
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 8.5e-38 160.2 88 92.0
CAN.G78.3 Capsicum annuum HOM05D009044 ORTHO05D011261 3.1e-32 141.7 111 67.6
CAN.G1690.1 Capsicum annuum HOM05D009044 ORTHO05D011261 9.1e-32 140.2 111 66.7
CAN.G577.5 Capsicum annuum HOM05D009044 ORTHO05D011261 9.1e-32 140.2 111 66.7
CAN.G131.12 Capsicum annuum HOM05D009044 ORTHO05D011261 8.5e-30 133.7 111 64.9
Nitab4.5_0012260g0010 Nicotiana tabacum HOM05D009044 ORTHO05D011261 2.0e-26 122.5 81 79.0
Solyc00g500345.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 1.6e-20 102.8 70 75.7
Lalb_Chr00c21g0405861 Lupinus albus HOM05D009044 ORTHO05D011261 2.8e-17 92.0 93 49.5
Lalb_Chr00c24g0406991 Lupinus albus HOM05D009044 ORTHO05D011261 2.8e-17 92.0 93 49.5
Cc00_g01620 Coffea canephora HOM05D009044 ORTHO05D011261 4.1e-16 88.2 96 46.9
Nitab4.5_0004471g0160 Nicotiana tabacum HOM05D009044 ORTHO05D011261 5.0e-14 81.3 57 66.7
arahy.Tifrunner.gnm1.ann1.4L1UA2 Arachis hypogaea HOM05D009044 ORTHO05D011261 1.5e-13 79.7 103 46.6
arahy.Tifrunner.gnm1.ann1.AMEH8M Arachis hypogaea HOM05D009044 ORTHO05D011261 1.5e-13 79.7 103 46.6
arahy.Tifrunner.gnm1.ann1.K6P20N Arachis hypogaea HOM05D009044 ORTHO05D011261 1.5e-13 79.7 103 46.6
arahy.Tifrunner.gnm1.ann1.TYE1TB Arachis hypogaea HOM05D009044 ORTHO05D011261 1.5e-13 79.7 103 46.6
arahy.Tifrunner.gnm1.ann1.QUEV48 Arachis hypogaea HOM05D009044 ORTHO05D011261 3.2e-13 78.6 103 46.6
CAN.G950.5 Capsicum annuum HOM05D009044 ORTHO05D011261 2.7e-12 75.5 94 40.4
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 6.1e-12 74.3 105 45.7
arahy.Tifrunner.gnm1.ann1.ES8831 Arachis hypogaea HOM05D009044 ORTHO05D011261 8.0e-12 73.9 103 46.6
arahy.Tifrunner.gnm1.ann1.P3P6H5 Arachis hypogaea HOM05D009044 ORTHO05D002807 8.0e-12 73.9 103 46.6
EL10Ac5g11444 Beta vulgaris HOM05D009044 ORTHO05D011261 2.3e-11 72.4 97 43.3
TPR.G10887 Trifolium pratense HOM05D009044 ORTHO05D011261 3.0e-11 72.0 99 42.4
Migut.E01132 Erythranthe guttata HOM05D009044 ORTHO05D011261 1.2e-10 70.1 72 48.6
arahy.Tifrunner.gnm1.ann1.2Y9TRI Arachis hypogaea HOM05D009044 ORTHO05D011261 1.5e-10 69.7 79 48.1
CAN.G1321.8 Capsicum annuum HOM05D009044 ORTHO05D011261 4.4e-10 68.2 95 37.9
CAN.G584.15 Capsicum annuum HOM05D009044 ORTHO05D011261 5.7e-10 67.8 95 36.8
Psat4g178280 Pisum sativum HOM05D009044 ORTHO05D011261 5.7e-10 67.8 81 44.4
Psat6g067520 Pisum sativum HOM05D009044 ORTHO05D011261 7.5e-10 67.4 97 41.2
Peaxi162Scf00622g00015 Petunia axillaris HOM05D009044 ORTHO05D011261 3.7e-09 65.1 103 47.6
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 1.1e-08 63.5 65 41.5
CAN.G1082.4 Capsicum annuum HOM05D009044 ORTHO05D011261 4.5e-07 58.2 96 35.4
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 2.3e-06 55.8 77 45.5
Lsat_1_v5_gn_5_126261 Lactuca sativa HOM05D009044 ORTHO05D011261 2.9e-06 55.5 83 36.1
Lsat_1_v5_gn_6_67941 Lactuca sativa HOM05D009044 ORTHO05D011261 2.9e-06 55.5 83 36.1
Lsat_1_v5_gn_9_49181 Lactuca sativa HOM05D009044 ORTHO05D011261 2.9e-06 55.5 83 36.1
Psat0s922g0200 Pisum sativum HOM05D014813 ORTHO05D011261 5.0e-06 54.7 53 41.5
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 6.6e-06 54.3 77 44.2


User provided reference genes

Program Settings