Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.3e-180 636.3 345 100.0
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 2.1e-170 602.4 345 89.9
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 7.3e-155 550.8 323 92.6
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 8.1e-146 520.8 341 81.8
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 3.1e-145 518.8 341 80.6
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 3.7e-122 442.2 324 75.9
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 1.2e-99 367.5 346 55.2
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 1.3e-95 354.0 344 54.7
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 2.1e-93 346.7 347 54.2
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 2.3e-92 343.2 346 54.3
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.2e-91 340.9 347 51.9
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 4.1e-89 332.4 342 52.0
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.2e-88 330.9 347 50.7
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 4.5e-88 328.9 332 55.4
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.3e-87 327.4 344 53.2
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.7e-87 327.0 345 49.6
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 1.1e-86 324.3 347 50.4
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 3.2e-86 322.8 347 51.6
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 3.2e-86 322.8 347 51.6
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-85 320.5 347 51.9
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-85 320.5 347 51.9
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 2.6e-83 313.2 341 51.0
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.3e-82 310.8 350 52.9
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 4.9e-82 308.9 346 48.0
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 4.9e-82 308.9 344 50.6
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.1e-81 307.8 341 51.0
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.8e-81 307.0 340 46.2
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 2.4e-81 306.6 346 51.4
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 3.1e-81 306.2 347 48.1
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.1e-81 305.8 340 45.9
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 7.0e-81 305.1 346 46.0
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 9.2e-81 304.7 341 50.7
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 2.7e-80 303.1 345 49.3
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 3.5e-80 302.8 344 44.8
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 3.5e-80 302.8 348 46.6
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 2.3e-79 300.1 349 45.0
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 2.9e-79 299.7 345 48.4
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 5.0e-79 298.9 340 45.0
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 5.0e-79 298.9 345 47.2
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.9e-78 297.0 345 47.2
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 2.5e-78 296.6 347 48.1
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 5.6e-78 295.4 349 48.7
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 1.0e-76 291.2 347 49.0
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.0e-76 291.2 347 49.6
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 4.0e-76 289.3 333 46.2
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 2.0e-75 287.0 345 46.1
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 3.4e-75 286.2 347 46.1
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 3.4e-75 286.2 346 44.5
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 4.4e-75 285.8 343 47.2
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 2.2e-74 283.5 328 50.6
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 2.2e-74 283.5 346 48.6
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 8.3e-74 281.6 351 46.7
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.8e-73 280.4 342 45.6
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 4.1e-73 279.3 349 45.3
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 1.2e-72 277.7 339 46.3
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.6e-72 277.3 347 44.1
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.6e-72 277.3 347 45.2
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.7e-71 273.9 347 45.2
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.7e-71 273.9 323 45.2
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 5.0e-71 272.3 342 46.2
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 5.0e-71 272.3 346 45.4
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 8.6e-71 271.6 340 45.0
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.1e-70 271.2 263 51.3
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 7.3e-70 268.5 342 44.4
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 7.3e-70 268.5 350 42.3
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 2.8e-69 266.5 323 45.5
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 3.6e-69 266.2 342 46.2
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 8.0e-69 265.0 342 45.6
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 1.8e-68 263.8 341 46.9
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 6.8e-68 261.9 323 45.5
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 6.8e-68 261.9 347 40.3
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 8.9e-68 261.5 349 44.4
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 1.5e-67 260.8 344 45.1
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 2.6e-67 260.0 345 44.3
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 2.6e-67 260.0 328 46.3
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 4.4e-67 259.2 354 45.5
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 7.5e-67 258.5 328 45.1
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 9.8e-67 258.1 341 45.5
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 2.2e-66 256.9 325 44.6
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 2.9e-66 256.5 326 44.5
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.1e-65 254.6 329 46.5
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.4e-65 254.2 342 44.4
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.6e-64 250.8 338 43.2
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 4.6e-64 249.2 333 46.5
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 6.0e-64 248.8 348 42.2
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 6.0e-64 248.8 330 42.4
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 7.8e-64 248.4 325 42.5
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 7.8e-64 248.4 342 44.2
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 7.8e-64 248.4 344 43.0
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.4e-60 237.7 338 43.2
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 1.4e-60 237.7 326 42.6
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 4.0e-60 236.1 337 43.3
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 2.0e-59 233.8 322 42.5
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 4.6e-56 222.6 346 39.9
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 3.0e-55 219.9 235 48.9
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 1.2e-53 214.5 326 42.0
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 8.4e-50 201.8 337 41.2
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 5.4e-49 199.1 352 35.2
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 4.3e-46 189.5 347 37.5
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 3.1e-44 183.3 325 37.2
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 5.2e-44 182.6 178 51.7
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-38 164.9 196 49.0
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 3.2e-33 146.7 119 58.8
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 3.2e-33 146.7 119 58.8
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 2.1e-32 144.1 263 33.8
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.5e-32 143.3 173 41.6
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 2.3e-31 140.6 352 30.7
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 6.9e-28 129.0 174 46.0
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 6.4e-26 122.5 350 29.7
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 7.1e-25 119.0 343 30.3
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 7.4e-22 109.0 219 30.1
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 2.9e-18 97.1 67 65.7
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 9.3e-17 92.0 173 30.6
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.7e-13 80.1 51 68.6
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 2.9e-10 70.5 40 72.5
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 6.5e-10 69.3 118 32.2


User provided reference genes

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