Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402017810 Solanum tuberosum HOM05D001959 ORTHO05D001955 2.0e-68 262.3 132 100.0
Sopen11g030240 Solanum pennellii HOM05D001959 ORTHO05D001955 6.0e-57 224.2 115 95.7
Solyc11g072590.3 Solanum lycopersicum HOM05D001959 ORTHO05D001955 5.1e-56 221.1 115 93.9
CAN.G84.35 Capsicum annuum HOM05D001959 ORTHO05D001955 6.0e-49 197.6 116 86.2
Nitab4.5_0000888g0050 Nicotiana tabacum HOM05D001959 ORTHO05D001955 1.4e-42 176.4 116 79.3
Peaxi162Scf00389g00212 Petunia axillaris HOM05D001959 ORTHO05D001955 5.7e-39 164.5 116 75.0
Nitab4.5_0000533g0030 Nicotiana tabacum HOM05D001959 ORTHO05D001955 2.2e-38 162.5 115 73.9
PGSC0003DMG400030059 Solanum tuberosum HOM05D001959 ORTHO05D001955 1.0e-24 117.1 116 56.0
Nitab4.5_0000022g0320 Nicotiana tabacum HOM05D001959 ORTHO05D001955 1.8e-24 116.3 116 56.0
Sopen06g001180 Solanum pennellii HOM05D001959 ORTHO05D001955 2.0e-23 112.8 116 54.3
Solyc06g005190.4 Solanum lycopersicum HOM05D001959 ORTHO05D001955 1.7e-22 109.8 116 54.3
Nitab4.5_0003258g0010 Nicotiana tabacum HOM05D001959 ORTHO05D001955 1.1e-21 107.1 116 52.6
CAN.G200.3 Capsicum annuum HOM05D001959 ORTHO05D001955 2.4e-21 105.9 115 51.3
Cc01_g11820 Coffea canephora HOM05D001959 ORTHO05D001955 5.0e-11 71.6 134 38.1
CSS0023988 Camellia sinensis var. sinensis HOM05D001959 ORTHO05D001955 1.1e-10 70.5 121 36.4
Nitab4.5_0000372g0030 Nicotiana tabacum HOM05D001959 ORTHO05D001955 4.2e-10 68.6 95 44.2
Duzib150G1164 Durio zibethinus HOM05D001959 ORTHO05D001955 1.2e-09 67.0 118 38.1
CSS0003965 Camellia sinensis var. sinensis HOM05D001959 ORTHO05D001955 1.6e-09 66.6 119 36.1
Dinv32813 Davidia involucrata HOM05D001959 ORTHO05D001955 2.1e-09 66.2 119 36.1
QL01p035905 Quercus lobata HOM05D001959 ORTHO05D001955 6.1e-09 64.7 121 35.5
Haze_23952 Corylus avellana HOM05D001959 ORTHO05D001955 8.0e-09 64.3 120 33.3
Gohir.A13G229800 Gossypium hirsutum HOM05D001959 ORTHO05D001955 1.4e-08 63.5 118 33.9
Gorai.013G266000 Gossypium raimondii HOM05D001959 ORTHO05D001955 1.4e-08 63.5 118 33.9
Dinv06354 Davidia involucrata HOM05D001959 ORTHO05D001955 3.0e-08 62.4 120 35.0
Gohir.A05G100500 Gossypium hirsutum HOM05D001959 ORTHO05D001955 4.0e-08 62.0 116 37.9
Thecc.09G336200 Theobroma cacao HOM05D001959 ORTHO05D001955 5.2e-08 61.6 121 36.4
Actinidia00815 Actinidia chinensis HOM05D001959 ORTHO05D001955 1.2e-07 60.5 118 33.9
Gohir.D13G235300 Gossypium hirsutum HOM05D001959 ORTHO05D001955 1.2e-07 60.5 118 33.1
Duzib168G1585 Durio zibethinus HOM05D001959 ORTHO05D001955 1.5e-07 60.1 121 35.5
Gorai.009G104400 Gossypium raimondii HOM05D001959 ORTHO05D001955 3.3e-07 58.9 114 36.8
COL.COLO4_18383 Corchorus olitorius HOM05D001959 ORTHO05D001955 4.4e-07 58.5 118 33.9
Manes.11G139600 Manihot esculenta HOM05D001959 ORTHO05D001955 7.5e-07 57.8 117 33.3
Gohir.D05G100300 Gossypium hirsutum HOM05D001959 ORTHO05D001955 9.7e-07 57.4 114 36.0
Gohir.A07G093300 Gossypium hirsutum HOM05D001959 ORTHO05D001955 2.2e-06 56.2 115 33.0
Gohir.D07G097900 Gossypium hirsutum HOM05D001959 ORTHO05D001955 2.2e-06 56.2 115 33.9
Gorai.001G105300 Gossypium raimondii HOM05D001959 ORTHO05D001955 2.2e-06 56.2 122 33.6
Gohir.A08G000088 Gossypium hirsutum HOM05D001959 ORTHO05D001955 3.7e-06 55.5 92 38.0
Hma1.2p1_1731F.1_g299750 Hydrangea macrophylla HOM05D001959 ORTHO05D001955 6.3e-06 54.7 118 34.7


User provided reference genes

Program Settings