Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402017090 Solanum tuberosum HOM05D000369 ORTHO05D022992 1.6e-22 108.6 57 100.0
Sopen08g002800 Solanum pennellii HOM05D000369 ORTHO05D000253 2.9e-16 87.8 55 83.6
CAN.G22.43 Capsicum annuum HOM05D000369 ORTHO05D000253 3.8e-16 87.4 57 80.7
Nitab4.5_0000114g0140 Nicotiana tabacum HOM05D000369 ORTHO05D000253 8.5e-16 86.3 55 81.8
PGSC0003DMG400029247 Solanum tuberosum HOM05D000369 ORTHO05D022992 8.5e-16 86.3 57 84.2
Nitab4.5_0000114g0160 Nicotiana tabacum HOM05D000369 ORTHO05D022992 1.1e-15 85.9 54 83.3
Nitab4.5_0002081g0010 Nicotiana tabacum HOM05D000369 ORTHO05D000253 1.1e-15 85.9 54 81.5
Nitab4.5_0002081g0020 Nicotiana tabacum HOM05D000369 ORTHO05D022992 1.1e-15 85.9 54 81.5
Sopen08g002810 Solanum pennellii HOM05D000369 ORTHO05D000253 9.3e-15 82.8 55 80.0
Solyc08g006850.4 Solanum lycopersicum HOM05D000369 ORTHO05D000253 1.2e-14 82.4 57 77.2
CAN.G22.44 Capsicum annuum HOM05D000369 ORTHO05D000253 3.6e-14 80.9 55 78.2
Nitab4.5_0002081g0050 Nicotiana tabacum HOM05D000369 ORTHO05D022992 5.1e-13 77.0 54 74.1
Nitab4.5_0002081g0060 Nicotiana tabacum HOM05D000369 ORTHO05D000253 1.9e-12 75.1 52 76.9
Nitab4.5_0000114g0170 Nicotiana tabacum HOM05D000369 ORTHO05D285984 2.2e-11 71.6 49 79.6
PGSC0003DMG400017091 Solanum tuberosum HOM05D000369 ORTHO05D000253 8.2e-11 69.7 57 71.9
PGSC0003DMG400008749 Solanum tuberosum HOM05D000369 ORTHO05D000253 1.1e-10 69.3 37 91.9
Solyc08g006860.3 Solanum lycopersicum HOM05D000369 ORTHO05D000253 2.4e-10 68.2 56 73.2
Sopen08g002820 Solanum pennellii HOM05D000369 ORTHO05D000253 1.2e-09 65.9 56 71.4
PGSC0003DMG400014104 Solanum tuberosum HOM05D000369 ORTHO05D000253 3.8e-08 60.8 30 100.0
Dinv39333 Davidia involucrata HOM05D000369 ORTHO05D000253 9.4e-07 56.2 65 50.8
GSVIVG01009551001 Vitis vinifera HOM05D000369 ORTHO05D000253 9.4e-07 56.2 64 53.1
Nn5g30216 Nelumbo nucifera HOM05D000369 ORTHO05D000253 1.6e-06 55.5 65 52.3
Peaxi162Scf00045g02119 Petunia axillaris HOM05D000369 ORTHO05D000253 1.6e-06 55.5 66 56.1
GSVIVG01009546001 Vitis vinifera HOM05D000369 ORTHO05D000253 2.1e-06 55.1 65 50.8
GSVIVG01009549001 Vitis vinifera HOM05D000369 ORTHO05D000253 2.7e-06 54.7 64 51.6
Eucgr.A01188 Eucalyptus grandis HOM05D000369 ORTHO05D000253 3.6e-06 54.3 60 56.7
Dinv39332 Davidia involucrata HOM05D000369 ORTHO05D000253 4.7e-06 53.9 66 48.5
Nitab4.5_0009365g0010 Nicotiana tabacum HOM05D000369 ORTHO05D000253 4.7e-06 53.9 67 46.3
Dinv03657 Davidia involucrata HOM05D000369 ORTHO05D000253 6.1e-06 53.5 66 48.5
Dinv25928 Davidia involucrata HOM05D000369 ORTHO05D000253 6.1e-06 53.5 66 48.5
Dinv25929 Davidia involucrata HOM05D000369 ORTHO05D000253 6.1e-06 53.5 66 48.5
Dinv25930 Davidia involucrata HOM05D000369 ORTHO05D000253 6.1e-06 53.5 66 48.5
PGSC0003DMG400008750 Solanum tuberosum HOM05D000369 ORTHO05D000109 6.1e-06 53.5 38 71.1
GSVIVG01022152001 Vitis vinifera HOM05D000369 ORTHO05D000253 6.1e-06 53.5 64 54.7
Ciclev10027314m.g Citrus clementina HOM05D000369 ORTHO05D000253 7.9e-06 53.1 65 50.8
MELO3C010888.2 Cucumis melo HOM05D000369 ORTHO05D000253 7.9e-06 53.1 60 51.7
CsaV3_2G028100 Cucumis sativus L. HOM05D000369 ORTHO05D000253 7.9e-06 53.1 60 51.7
Dinv03652 Davidia involucrata HOM05D000369 ORTHO05D000253 7.9e-06 53.1 66 48.5
Eucgr.I00941 Eucalyptus grandis HOM05D000369 ORTHO05D000253 7.9e-06 53.1 65 49.2
Hma1.2p1_0047F.1_g027710 Hydrangea macrophylla HOM05D000369 ORTHO05D000253 7.9e-06 53.1 64 51.6
MD02G1169600 Malus domestica HOM05D000369 ORTHO05D000253 7.9e-06 53.1 66 48.5
PGR083G1706 Punica granatum HOM05D000369 ORTHO05D000253 7.9e-06 53.1 66 45.5


User provided reference genes

Program Settings