Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402013020 Solanum tuberosum HOM05D006669 ORTHO05D008440 5.2e-248 860.5 415 100.0
Sopen02g014840 Solanum pennellii HOM05D006669 ORTHO05D008440 1.0e-235 819.7 414 95.4
Solyc02g064740.3 Solanum lycopersicum HOM05D006669 ORTHO05D008440 8.1e-233 810.1 414 94.7
CAN.G1290.5 Capsicum annuum HOM05D006669 ORTHO05D008440 4.2e-221 771.2 414 88.4
Nitab4.5_0001772g0050 Nicotiana tabacum HOM05D006669 ORTHO05D008440 3.6e-209 731.5 401 86.8
Nitab4.5_0004400g0020 Nicotiana tabacum HOM05D006669 ORTHO05D008440 1.2e-207 726.5 451 78.5
Peaxi162Scf01526g00017 Petunia axillaris HOM05D006669 ORTHO05D008440 7.7e-167 590.9 419 70.9
Actinidia21236 Actinidia chinensis HOM05D006669 ORTHO05D008440 8.5e-150 534.3 419 61.1
Actinidia16443 Actinidia chinensis HOM05D006669 ORTHO05D008440 1.9e-149 533.1 419 61.1
Lj4C159G4 Lonicera japonica HOM05D006669 ORTHO05D008440 8.8e-147 524.2 419 61.1
Oeu040598.1 Olea europaea HOM05D006669 ORTHO05D008440 9.8e-146 520.8 414 63.5
Atru.chr3.203 Acer truncatum HOM05D006669 ORTHO05D008440 2.2e-145 519.6 422 60.2
Rhsim08G0095700 Rhododendron simsii HOM05D006669 ORTHO05D008440 1.1e-144 517.3 415 61.0
GSVIVG01000155001 Vitis vinifera HOM05D006669 ORTHO05D008440 1.4e-144 516.9 421 59.9
Cc07_g06760 Coffea canephora HOM05D006669 ORTHO05D008440 7.0e-144 514.6 417 61.4
CSS0011361 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 1.0e-142 510.8 417 60.7
CSS0012464 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 3.8e-142 508.8 417 60.4
Cpa.g.sc6.52 Carica papaya HOM05D006669 ORTHO05D008440 6.6e-142 508.1 425 59.5
Gohir.A02G153400 Gossypium hirsutum HOM05D006669 ORTHO05D008440 2.8e-140 502.7 417 59.7
CANSAT01G1540 Cannabis sativa HOM05D006669 ORTHO05D008440 3.6e-140 502.3 419 58.5
COL.COLO4_11531 Corchorus olitorius HOM05D006669 ORTHO05D008440 4.7e-140 501.9 417 60.2
Gohir.D03G027000 Gossypium hirsutum HOM05D006669 ORTHO05D008440 4.7e-140 501.9 417 59.7
Ciclev10027520m.g Citrus clementina HOM05D006669 ORTHO05D008440 8.0e-140 501.1 420 56.7
Gorai.003G028700 Gossypium raimondii HOM05D006669 ORTHO05D008440 1.8e-139 500.0 417 59.5
Sabra07G0046000 Salix brachista HOM05D006669 ORTHO05D008440 4.0e-139 498.8 424 59.2
SalBow6G5653 Salvia bowleyana HOM05D006669 ORTHO05D008440 4.0e-139 498.8 417 57.6
TWI53G1681 Tripterygium wilfordii HOM05D006669 ORTHO05D008440 5.7e-138 495.0 419 57.3
Potri.007G052400 Populus trichocarpa HOM05D006669 ORTHO05D008440 1.7e-137 493.4 424 59.2
Haze_15316 Corylus avellana HOM05D006669 ORTHO05D008440 2.2e-137 493.0 373 64.3
Duzib147G0464 Durio zibethinus HOM05D006669 ORTHO05D008440 6.4e-137 491.5 418 58.4
Psat0s1712g0160 Pisum sativum HOM05D006669 ORTHO05D008440 8.3e-137 491.1 426 56.8
Glyma.01G191500 Glycine max HOM05D006669 ORTHO05D008440 1.4e-136 490.3 424 55.7
MD15G1293100 Malus domestica HOM05D006669 ORTHO05D008440 3.2e-136 489.2 425 57.2
Lj2g0024438 Lotus japonicus HOM05D006669 ORTHO05D008440 7.0e-136 488.0 426 54.7
FAN28G0180 Fragaria x ananassa HOM05D006669 ORTHO05D008440 9.2e-136 487.6 420 58.3
RcHm_v2.0_Chr2g0107341 Rosa chinensis HOM05D006669 ORTHO05D008440 2.0e-135 486.5 420 58.6
FAN26G1063 Fragaria x ananassa HOM05D006669 ORTHO05D008440 4.6e-135 485.3 418 58.4
TPR.G20965 Trifolium pratense HOM05D006669 ORTHO05D008440 4.6e-135 485.3 427 56.2
Medtr5g016110 Medicago truncatula HOM05D006669 ORTHO05D008440 5.9e-135 485.0 423 55.8
arahy.Tifrunner.gnm1.ann1.QDP4K1 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.3e-134 483.8 426 55.4
arahy.Tifrunner.gnm1.ann1.37Y375 Arachis hypogaea HOM05D006669 ORTHO05D008440 2.3e-134 483.0 426 55.2
Eucgr.I00723 Eucalyptus grandis HOM05D006669 ORTHO05D008440 2.3e-134 483.0 421 57.0
Glyma.11G050600 Glycine max HOM05D006669 ORTHO05D008440 2.3e-134 483.0 427 54.8
Phvul.002G013400 Phaseolus vulgaris HOM05D006669 ORTHO05D008440 5.0e-134 481.9 426 54.9
Aqoxy6G02742 Aquilegia oxysepala HOM05D006669 ORTHO05D008440 2.5e-133 479.6 424 56.4
HanXRQChr12g0376911 Helianthus annuus HOM05D006669 ORTHO05D008440 4.3e-133 478.8 413 56.2
Ca_24710_v3 Cicer arietinum L. HOM05D006669 ORTHO05D008440 9.5e-133 477.6 420 56.0
THA.LOC104807621 Tarenaya hassleriana HOM05D006669 ORTHO05D008440 1.2e-132 477.2 422 55.5
Lalb_Chr09g0323441 Lupinus albus HOM05D006669 ORTHO05D008440 2.8e-132 476.1 428 55.4
FAN19G2999 Fragaria x ananassa HOM05D006669 ORTHO05D008440 3.6e-132 475.7 422 56.9
Sp7g35160 Schrenkiella parvula HOM05D006669 ORTHO05D008440 6.2e-132 474.9 419 55.6
Thhalv10024891m.g Eutrema salsugineum HOM05D006669 ORTHO05D008440 8.0e-132 474.6 419 55.6
BcaB03g12341 Brassica carinata HOM05D006669 ORTHO05D008440 1.8e-131 473.4 414 56.0
Migut.H00372 Erythranthe guttata HOM05D006669 ORTHO05D008440 5.2e-131 471.9 418 55.0
AL7G13310 Arabidopsis lyrata HOM05D006669 ORTHO05D008440 5.8e-130 468.4 418 54.5
AT4G37480 Arabidopsis thaliana HOM05D006669 ORTHO05D008440 2.2e-129 466.5 418 55.0
CARHR245880 Cardamine hirsuta HOM05D006669 ORTHO05D008440 8.3e-129 464.5 420 54.0
ECA246G2447 Erigeron canadensis HOM05D006669 ORTHO05D008440 1.1e-128 464.2 417 54.4
Carub.0007s0280 Capsella rubella HOM05D006669 ORTHO05D008440 1.9e-128 463.4 421 53.9
EL10Ac6g15658 Beta vulgaris HOM05D006669 ORTHO05D008440 2.0e-127 459.9 427 55.0
BolC3t20175H Brassica oleracea HOM05D006669 ORTHO05D008440 2.0e-127 459.9 417 56.4
ClCG01G017320 Citrullus lanatus HOM05D006669 ORTHO05D008440 2.0e-127 459.9 422 53.3
BcaC01g00401 Brassica carinata HOM05D006669 ORTHO05D008440 3.5e-127 459.1 419 56.3
Manes.12G112200 Manihot esculenta HOM05D006669 ORTHO05D008440 3.5e-127 459.1 377 59.7
CiPaw.02G004600 Carya illinoinensis HOM05D006669 ORTHO05D008440 6.0e-127 458.4 379 59.1
C03p79320 Brassica napus HOM05D006669 ORTHO05D008440 1.7e-126 456.8 415 55.9
A08p22660 Brassica napus HOM05D006669 ORTHO05D008440 3.9e-126 455.7 417 55.9
BraA08t34233Z Brassica rapa HOM05D006669 ORTHO05D008440 3.9e-126 455.7 417 55.9
Aa31LG6G14350 Aethionema arabicum HOM05D006669 ORTHO05D008440 7.3e-125 451.4 430 53.3
CsaV3_6G043850 Cucumis sativus L. HOM05D006669 ORTHO05D008440 4.0e-123 445.7 419 53.0
TAR381G0156 Trochodendron aralioides HOM05D006669 ORTHO05D008440 2.0e-122 443.4 379 59.1
ATR0030G057 Amborella trichopoda HOM05D006669 ORTHO05D008440 4.4e-122 442.2 440 50.2
SGA_v2.0_scaffold15G07411 Striga asiatica HOM05D006669 ORTHO05D008440 4.9e-121 438.7 429 52.7
Lsat_1_v5_gn_3_88261 Lactuca sativa HOM05D006669 ORTHO05D008440 1.6e-119 433.7 402 53.5
AUR62003969 Chenopodium quinoa HOM05D006669 ORTHO05D008440 5.1e-118 428.7 444 49.1
Sed0019482 Sechium edule HOM05D006669 ORTHO05D008440 8.9e-115 417.9 383 55.1
MELO3C007610.2 Cucumis melo HOM05D006669 ORTHO05D008440 8.4e-113 411.4 423 49.9
VMungo1215G2631 Vigna mungo HOM05D006669 ORTHO05D008440 1.0e-110 404.4 426 50.2
Nn1g04622 Nelumbo nucifera HOM05D006669 ORTHO05D008440 1.4e-104 384.0 422 48.3
Os03g0761700 Oryza sativa ssp. japonica HOM05D006669 ORTHO05D008440 1.4e-99 367.5 416 47.4
AUR62040277 Chenopodium quinoa HOM05D006669 ORTHO05D008440 8.4e-97 358.2 428 45.8
Hma1.2p1_1506F.1_g287540 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 4.2e-96 355.9 319 56.4
PGR004G0108 Punica granatum HOM05D006669 ORTHO05D008440 7.4e-93 345.1 333 56.8
FvH4_1g17190 Fragaria vesca HOM05D006669 ORTHO05D008440 1.3e-92 344.4 326 56.1
SEGI_27298 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 1.1e-91 341.3 462 42.0
Prupe.6G224500 Prunus persica HOM05D006669 ORTHO05D008440 2.9e-89 333.2 327 54.4
vmacro17989 Vaccinium macrocarpon HOM05D006669 ORTHO05D008440 1.5e-85 320.9 318 52.5
QL06p039922 Quercus lobata HOM05D006669 ORTHO05D008440 5.8e-82 308.9 302 54.6
DCAR_025954 Daucus carota HOM05D006669 ORTHO05D008440 1.3e-81 307.8 321 53.3
Thecc.01G068300 Theobroma cacao HOM05D006669 ORTHO05D008440 4.2e-80 302.8 294 55.1
Sc16g0000050 Simmondsia chinensis HOM05D006669 ORTHO05D008440 1.8e-75 287.3 298 50.0
MSTRG.2837 Avicennia marina HOM05D006669 ORTHO05D008440 2.4e-75 287.0 298 53.4
Zm00001eb214300 Zea mays HOM05D006669 ORTHO05D008440 3.1e-75 286.6 325 47.4
Hma1.2p1_1506F.1_g287530 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 2.1e-71 273.9 238 59.2
unitig_62.g23421 Utricularia gibba HOM05D006669 ORTHO05D008440 1.0e-70 271.6 289 49.1
HPP92_000758 Vanilla planifolia HOM05D006669 ORTHO05D008440 1.2e-66 258.1 238 53.8
Mapoly0045s0047 Marchantia polymorpha HOM05D006669 ORTHO05D008440 5.5e-64 249.2 425 36.9
AagrBONN_evm.TU.Sc2ySwM_228.5150 Anthoceros agrestis HOM05D006669 ORTHO05D008440 2.6e-50 203.8 346 36.1
Pp3c5_10140 Physcomitrium patens HOM05D006669 ORTHO05D008440 1.8e-46 191.0 393 32.8
QL06p039919 Quercus lobata HOM05D006669 ORTHO05D008440 2.3e-46 190.7 120 65.8
Manes.01G047215 Manihot esculenta HOM05D006669 ORTHO05D008440 3.1e-35 153.7 95 67.4
GSVIVG01000157001 Vitis vinifera HOM05D006669 ORTHO05D008440 1.1e-32 145.2 130 53.8
Hma1.2p1_1506F.1_g287550 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 2.6e-29 134.0 85 67.1
TPR.G627 Trifolium pratense HOM05D006669 ORTHO05D008440 3.7e-28 130.2 131 51.1
HanXRQChr08g0218031 Helianthus annuus HOM05D006669 ORTHO05D008440 2.4e-27 127.5 97 63.9
Glyma.01G216100 Glycine max HOM05D006669 ORTHO05D008440 3.1e-27 127.1 104 59.6
SEGI_19371 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 8.0e-23 112.5 112 49.1
HPP92_000757 Vanilla planifolia HOM05D006669 ORTHO05D008440 1.6e-18 98.2 106 46.2
Manes.07G077122 Manihot esculenta HOM05D006669 ORTHO05D008440 4.3e-16 90.1 69 60.9
MCO03G360 Micromonas commoda HOM05D006669 ORTHO05D008440 2.0e-13 81.3 275 28.7
Dinv26898 Davidia involucrata HOM05D006669 ORTHO05D008440 9.2e-11 72.4 52 61.5
Cre09.g389001 Chlamydomonas reinhardtii HOM05D006669 ORTHO05D008440 4.3e-08 63.5 89 38.2
Zm00001eb058160 Zea mays HOM05D006669 ORTHO05D008440 8.1e-07 59.3 53 56.6


User provided reference genes

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