Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402012406 Solanum tuberosum HOM05D000553 ORTHO05D020606 3.7e-28 127.5 63 100.0
Nitab4.5_0005017g0040 Nicotiana tabacum HOM05D000553 ORTHO05D000460 4.6e-15 84.0 57 68.4
Thhalv10022021m.g Eutrema salsugineum HOM05D000553 ORTHO05D020606 4.3e-13 77.4 52 63.5
FAN14G1246 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-13 76.3 52 61.5
PGSC0003DMG401012406 Solanum tuberosum HOM05D000553 ORTHO05D000460 6.3e-12 73.6 102 43.1
Sabra16G0260200 Salix brachista HOM05D000553 ORTHO05D020606 1.1e-11 72.8 61 57.4
Solyc07g062880.3 Solanum lycopersicum HOM05D000553 ORTHO05D000460 3.1e-11 71.2 102 42.2
Sopen07g031080 Solanum pennellii HOM05D000553 ORTHO05D000460 3.1e-11 71.2 102 42.2
Nitab4.5_0002330g0120 Nicotiana tabacum HOM05D000553 ORTHO05D000460 1.0e-09 66.2 102 38.2
CAN.G162.37 Capsicum annuum HOM05D000553 ORTHO05D000460 1.3e-09 65.9 102 38.2
CAN.G213.19 Capsicum annuum HOM05D000553 ORTHO05D000460 1.3e-09 65.9 102 38.2
Peaxi162Scf00069g01736 Petunia axillaris HOM05D000553 ORTHO05D000460 2.2e-09 65.1 102 38.2
SalBow7G0556 Salvia bowleyana HOM05D000553 ORTHO05D000460 2.2e-09 65.1 102 38.2
arahy.Tifrunner.gnm1.ann1.5058JZ Arachis hypogaea HOM05D000553 ORTHO05D000460 1.1e-08 62.8 102 38.2
arahy.Tifrunner.gnm1.ann1.6NP7E0 Arachis hypogaea HOM05D000553 ORTHO05D000460 1.1e-08 62.8 102 38.2
Solyc07g062910.3 Solanum lycopersicum HOM05D000553 ORTHO05D000460 1.1e-08 62.8 95 42.1
CSS0021514 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 1.4e-08 62.4 102 37.3
Haze_09467 Corylus avellana HOM05D000553 ORTHO05D000460 1.4e-08 62.4 97 38.1
HanXRQChr15g0495441 Helianthus annuus HOM05D000553 ORTHO05D000460 1.4e-08 62.4 102 37.3
Lsat_1_v5_gn_7_104620 Lactuca sativa HOM05D000553 ORTHO05D000460 1.4e-08 62.4 102 37.3
TPR.G7962 Trifolium pratense HOM05D000553 ORTHO05D000460 1.4e-08 62.4 102 37.3
CSS0011137 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 1.9e-08 62.0 102 37.3
Cc05_g11760 Coffea canephora HOM05D000553 ORTHO05D000460 1.9e-08 62.0 102 37.3
Hund22885 Selenicereus undatus HOM05D000553 ORTHO05D000460 1.9e-08 62.0 102 36.3
Actinidia09704 Actinidia chinensis HOM05D000553 ORTHO05D000460 3.2e-08 61.2 102 36.3
Glyma.13G274000 Glycine max HOM05D000553 ORTHO05D000460 3.2e-08 61.2 102 36.3
Medtr2g078670 Medicago truncatula HOM05D000553 ORTHO05D000460 3.2e-08 61.2 102 36.3
PGSC0003DMG400015367 Solanum tuberosum HOM05D000553 ORTHO05D000460 4.2e-08 60.8 102 37.3
Phvul.005G074901 Phaseolus vulgaris HOM05D000553 ORTHO05D000460 5.5e-08 60.5 102 36.3
MSTRG.12895 Avicennia marina HOM05D000553 ORTHO05D000460 7.2e-08 60.1 102 36.3
ECA233G6106 Erigeron canadensis HOM05D000553 ORTHO05D000460 7.2e-08 60.1 108 36.1
CiPaw.11G172100 Carya illinoinensis HOM05D000553 ORTHO05D000460 9.4e-08 59.7 102 36.3
DCAR_013120 Daucus carota HOM05D000553 ORTHO05D000460 9.4e-08 59.7 102 35.3
Ah.06g184560 Amaranthus hybridus HOM05D000553 ORTHO05D000460 1.2e-07 59.3 102 34.3
Lsat_1_v5_gn_8_12320 Lactuca sativa HOM05D000553 ORTHO05D000460 1.2e-07 59.3 108 36.1
Lalb_Chr19g0134111 Lupinus albus HOM05D000553 ORTHO05D000460 1.2e-07 59.3 102 36.3
Psat0s3104g0120 Pisum sativum HOM05D000553 ORTHO05D000460 1.2e-07 59.3 102 35.3
PGR031G1145 Punica granatum HOM05D000553 ORTHO05D000460 1.2e-07 59.3 102 34.3
Sed0001207 Sechium edule HOM05D000553 ORTHO05D000460 1.2e-07 59.3 102 37.3
Solyc12g013920.2 Solanum lycopersicum HOM05D000553 ORTHO05D000460 1.2e-07 59.3 102 36.3
Sopen12g005680 Solanum pennellii HOM05D000553 ORTHO05D000460 1.2e-07 59.3 102 36.3
Aqoxy1G02328 Aquilegia oxysepala HOM05D000553 ORTHO05D000460 1.6e-07 58.9 102 35.3
BcaC04g20403 Brassica carinata HOM05D000553 ORTHO05D000460 1.6e-07 58.9 102 35.3
BolC9t57280H Brassica oleracea HOM05D000553 ORTHO05D000460 1.6e-07 58.9 102 35.3
Lj3g0021761 Lotus japonicus HOM05D000553 ORTHO05D000460 2.1e-07 58.5 102 36.3
Oeu005402.2 Olea europaea HOM05D000553 ORTHO05D000460 2.1e-07 58.5 32 78.1
Peaxi162Scf00000g00303 Petunia axillaris HOM05D000553 ORTHO05D000460 2.1e-07 58.5 32 75.0
Potri.011G115700 Populus trichocarpa HOM05D000553 ORTHO05D000460 2.1e-07 58.5 117 35.9
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 2.7e-07 58.2 102 34.3
Phvul.011G163000 Phaseolus vulgaris HOM05D000553 ORTHO05D000460 2.7e-07 58.2 102 36.3
QL08p022801 Quercus lobata HOM05D000553 ORTHO05D000460 2.7e-07 58.2 102 34.3
Gohir.D13G016900 Gossypium hirsutum HOM05D000553 ORTHO05D000460 3.6e-07 57.8 108 34.3
Lj3g0009267 Lotus japonicus HOM05D000553 ORTHO05D000460 3.6e-07 57.8 102 34.3
A10p11300 Brassica napus HOM05D000553 ORTHO05D000460 4.6e-07 57.4 102 34.3
BraA10t43222Z Brassica rapa HOM05D000553 ORTHO05D000460 4.6e-07 57.4 102 34.3
Glyma.12G162800 Glycine max HOM05D000553 ORTHO05D000460 4.6e-07 57.4 102 35.3
Gohir.A01G061300 Gossypium hirsutum HOM05D000553 ORTHO05D000460 4.6e-07 57.4 102 33.3
Gohir.D01G047900 Gossypium hirsutum HOM05D000553 ORTHO05D000460 4.6e-07 57.4 102 33.3
Gorai.002G067700 Gossypium raimondii HOM05D000553 ORTHO05D000460 4.6e-07 57.4 102 33.3
HanXRQChr08g0222131 Helianthus annuus HOM05D000553 ORTHO05D000460 4.6e-07 57.4 108 35.2
HanXRQChr12g0370521 Helianthus annuus HOM05D000553 ORTHO05D000460 4.6e-07 57.4 108 35.2
Potri.008G067100 Populus trichocarpa HOM05D000553 ORTHO05D000460 4.6e-07 57.4 108 35.2
Sp6g16020 Schrenkiella parvula HOM05D000553 ORTHO05D000460 4.6e-07 57.4 102 34.3
Aa31LG5G19490 Aethionema arabicum HOM05D000553 ORTHO05D000460 6.1e-07 57.0 108 36.1
BcaB05g22093 Brassica carinata HOM05D000553 ORTHO05D000460 6.1e-07 57.0 102 34.3
Nn1g04180 Nelumbo nucifera HOM05D000553 ORTHO05D000460 6.1e-07 57.0 102 34.3
Nitab4.5_0001455g0060 Nicotiana tabacum HOM05D000553 ORTHO05D000460 6.1e-07 57.0 108 32.4
Sp4g22420 Schrenkiella parvula HOM05D000553 ORTHO05D000460 6.1e-07 57.0 108 35.2
GSVIVG01014293001 Vitis vinifera HOM05D000553 ORTHO05D000460 6.1e-07 57.0 102 34.3
Atru.chr12.20 Acer truncatum HOM05D000553 ORTHO05D000460 7.9e-07 56.6 108 34.3
EL10Ac4g08235 Beta vulgaris HOM05D000553 ORTHO05D000460 7.9e-07 56.6 102 34.3
Dinv20200 Davidia involucrata HOM05D000553 ORTHO05D000460 7.9e-07 56.6 102 34.3
Glyma.12G226700 Glycine max HOM05D000553 ORTHO05D000460 7.9e-07 56.6 102 34.3
RcHm_v2.0_Chr3g0463261 Rosa chinensis HOM05D000553 ORTHO05D000460 7.9e-07 56.6 103 33.0
VMungo1080G0790 Vigna mungo HOM05D000553 ORTHO05D000460 7.9e-07 56.6 102 35.3
Ciclev10009870m.g Citrus clementina HOM05D000553 ORTHO05D000460 1.0e-06 56.2 105 32.4
Thhalv10015019m.g Eutrema salsugineum HOM05D000553 ORTHO05D000460 1.0e-06 56.2 102 33.3
Thhalv10017415m.g Eutrema salsugineum HOM05D000553 ORTHO05D000460 1.0e-06 56.2 108 35.2
Gohir.A13G015800 Gossypium hirsutum HOM05D000553 ORTHO05D000460 1.0e-06 56.2 108 34.3
Lalb_Chr04g0250621 Lupinus albus HOM05D000553 ORTHO05D000460 1.0e-06 56.2 108 32.4
TAR623G0400 Trochodendron aralioides HOM05D000553 ORTHO05D000460 1.0e-06 56.2 108 31.5
VMungo1127G0536 Vigna mungo HOM05D000553 ORTHO05D000460 1.0e-06 56.2 101 35.6
Atru.chr2.2412 Acer truncatum HOM05D000553 ORTHO05D000460 1.4e-06 55.8 102 33.3
Actinidia29694 Actinidia chinensis HOM05D000553 ORTHO05D000460 1.4e-06 55.8 103 35.0
Actinidia33930 Actinidia chinensis HOM05D000553 ORTHO05D000460 1.4e-06 55.8 103 35.0
AL8G29050 Arabidopsis lyrata HOM05D000553 ORTHO05D000460 1.4e-06 55.8 102 32.4
AT5G53940 Arabidopsis thaliana HOM05D000553 ORTHO05D000460 1.4e-06 55.8 102 32.4
Carub.0008s1425 Capsella rubella HOM05D000553 ORTHO05D000460 1.4e-06 55.8 102 32.4
CARHR267080 Cardamine hirsuta HOM05D000553 ORTHO05D000460 1.4e-06 55.8 102 32.4
PSO675G5003 Papaver somniferum HOM05D000553 ORTHO05D000460 1.4e-06 55.8 103 32.0
HPP92_015496 Vanilla planifolia HOM05D000553 ORTHO05D000460 1.4e-06 55.8 108 33.3
AL4G37760 Arabidopsis lyrata HOM05D000553 ORTHO05D000460 1.8e-06 55.5 108 34.3
BcaC02g07353 Brassica carinata HOM05D000553 ORTHO05D000460 1.8e-06 55.5 108 35.2
A04p30060 Brassica napus HOM05D000553 ORTHO05D000460 1.8e-06 55.5 108 35.2
C04p67790 Brassica napus HOM05D000553 ORTHO05D003668 1.8e-06 55.5 108 35.2
BolC4t28283H Brassica oleracea HOM05D000553 ORTHO05D003668 1.8e-06 55.5 108 35.2
BraA04t18500Z Brassica rapa HOM05D000553 ORTHO05D000460 1.8e-06 55.5 108 35.2
Carub.0004s2228 Capsella rubella HOM05D000553 ORTHO05D000460 1.8e-06 55.5 108 34.3
CARHR135080 Cardamine hirsuta HOM05D000553 ORTHO05D000460 1.8e-06 55.5 108 34.3
FvH4_3g19470 Fragaria vesca HOM05D000553 ORTHO05D000460 1.8e-06 55.5 102 33.3
FAN11G3355 Fragaria x ananassa HOM05D000553 ORTHO05D000460 1.8e-06 55.5 102 33.3
FAN16G2913 Fragaria x ananassa HOM05D000553 ORTHO05D000460 1.8e-06 55.5 102 33.3
Nitab4.5_0001746g0030 Nicotiana tabacum HOM05D000553 ORTHO05D284175 1.8e-06 55.5 73 43.8
Prupe.4G176300 Prunus persica HOM05D000553 ORTHO05D000460 1.8e-06 55.5 102 33.3
Aa31LG3G10020 Aethionema arabicum HOM05D012500 ORTHO05D009211 2.3e-06 55.1 102 32.4
BcaB06g29128 Brassica carinata HOM05D000553 ORTHO05D000460 2.3e-06 55.1 108 35.2
CiPaw.01G297500 Carya illinoinensis HOM05D000553 ORTHO05D000460 2.3e-06 55.1 108 33.3
Lalb_Chr01g0006601 Lupinus albus HOM05D000553 ORTHO05D000460 2.3e-06 55.1 102 35.3
Nitab4.5_0001979g0050 Nicotiana tabacum HOM05D000553 ORTHO05D000460 2.3e-06 55.1 31 74.2
CSS0025442 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 33.3
CAN.G1616.2 Capsicum annuum HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 31.5
CiPaw.01G249500 Carya illinoinensis HOM05D000553 ORTHO05D000460 3.0e-06 54.7 103 32.0
CiPaw.02G191700 Carya illinoinensis HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 32.4
Ciclev10033070m.g Citrus clementina HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 33.3
Duzib114G0020 Durio zibethinus HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 33.3
Gohir.A05G329500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 34.3
Gohir.D04G067500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 34.3
Gorai.012G076700 Gossypium raimondii HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 34.3
Lsat_1_v5_gn_9_33821 Lactuca sativa HOM05D000553 ORTHO05D000460 3.0e-06 54.7 103 33.0
Oeu060563.1 Olea europaea HOM05D000553 ORTHO05D000460 3.0e-06 54.7 112 32.1
PSO541G1930 Papaver somniferum HOM05D000553 ORTHO05D000460 3.0e-06 54.7 102 31.4
PGR044G0199 Punica granatum HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 33.3
Sc03g0010170 Simmondsia chinensis HOM05D000553 ORTHO05D000460 3.0e-06 54.7 102 30.4
THA.LOC104816207 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 3.0e-06 54.7 103 34.0
TAR627G0006 Trochodendron aralioides HOM05D000553 ORTHO05D000460 3.0e-06 54.7 102 33.3
TAR636G2882 Trochodendron aralioides HOM05D000553 ORTHO05D000460 3.0e-06 54.7 108 31.5
Ca_23042_v3 Cicer arietinum L. HOM05D000553 ORTHO05D000460 3.9e-06 54.3 102 34.3
COL.COLO4_36714 Corchorus olitorius HOM05D000553 ORTHO05D000460 3.9e-06 54.3 102 31.4
Duzib093G0452 Durio zibethinus HOM05D000553 ORTHO05D000460 3.9e-06 54.3 103 33.0
Migut.M00781 Erythranthe guttata HOM05D000553 ORTHO05D000460 3.9e-06 54.3 102 35.3
HanXRQChr10g0293791 Helianthus annuus HOM05D000553 ORTHO05D000460 3.9e-06 54.3 103 33.0
Lalb_Chr10g0105121 Lupinus albus HOM05D000553 ORTHO05D000460 3.9e-06 54.3 108 32.4
MD03G1231600 Malus domestica HOM05D000553 ORTHO05D000460 3.9e-06 54.3 102 33.3
Nitab4.5_0000119g0190 Nicotiana tabacum HOM05D000553 ORTHO05D000460 3.9e-06 54.3 103 32.0
Phvul.008G224700 Phaseolus vulgaris HOM05D000553 ORTHO05D000460 3.9e-06 54.3 108 33.3
Sopen07g031090 Solanum pennellii HOM05D000553 ORTHO05D000460 3.9e-06 54.3 101 35.6
Sopen07g031100 Solanum pennellii HOM05D000553 ORTHO05D000460 3.9e-06 54.3 101 35.6
Thecc.07G095800 Theobroma cacao HOM05D000553 ORTHO05D000460 3.9e-06 54.3 102 32.4
Thecc.10G020500 Theobroma cacao HOM05D000553 ORTHO05D000460 3.9e-06 54.3 108 32.4
TWI09G1557 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 3.9e-06 54.3 108 33.3
Aqoxy2G00922 Aquilegia oxysepala HOM05D000553 ORTHO05D000460 5.1e-06 53.9 103 32.0
Cpa.g.sc19.186 Carica papaya HOM05D000553 ORTHO05D000460 5.1e-06 53.9 108 32.4
Dinv34394 Davidia involucrata HOM05D000553 ORTHO05D000460 5.1e-06 53.9 108 33.3
Gohir.A11G329400 Gossypium hirsutum HOM05D000553 ORTHO05D000460 5.1e-06 53.9 103 32.0
Gohir.D11G348500 Gossypium hirsutum HOM05D000553 ORTHO05D000460 5.1e-06 53.9 103 32.0
Hma1.2p1_0446F.1_g154560 Hydrangea macrophylla HOM05D000553 ORTHO05D000460 5.1e-06 53.9 108 32.4
Peaxi162Scf00825g00027 Petunia axillaris HOM05D000553 ORTHO05D000460 5.1e-06 53.9 108 33.3
QL07p035818 Quercus lobata HOM05D000553 ORTHO05D000460 5.1e-06 53.9 103 31.1
GSVIVG01032842001 Vitis vinifera HOM05D000553 ORTHO05D000460 5.1e-06 53.9 108 32.4
Actinidia13931 Actinidia chinensis HOM05D000553 ORTHO05D000460 6.7e-06 53.5 103 33.0
Ah.16g103430 Amaranthus hybridus HOM05D000553 ORTHO05D000460 6.7e-06 53.5 102 32.4
CiPaw.09G208400 Carya illinoinensis HOM05D000553 ORTHO05D000460 6.7e-06 53.5 103 32.0
MELO3C025607.2 Cucumis melo HOM05D000553 ORTHO05D000460 6.7e-06 53.5 102 33.3
DCAR_011805 Daucus carota HOM05D000553 ORTHO05D000460 6.7e-06 53.5 108 34.3
Gorai.007G378800 Gossypium raimondii HOM05D000553 ORTHO05D000460 6.7e-06 53.5 103 32.0
Lalb_Chr17g0346741 Lupinus albus HOM05D000553 ORTHO05D000460 6.7e-06 53.5 108 32.4
Oeu024614.2 Olea europaea HOM05D000553 ORTHO05D000460 6.7e-06 53.5 105 31.4
SalBow6G4828 Salvia bowleyana HOM05D000553 ORTHO05D000460 6.7e-06 53.5 108 34.3
Sp3g07410 Schrenkiella parvula HOM05D000553 ORTHO05D000460 6.7e-06 53.5 103 34.0
Hund09174 Selenicereus undatus HOM05D000553 ORTHO05D000460 6.7e-06 53.5 103 32.0
THA.LOC104825167 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 6.7e-06 53.5 102 32.4
TPR.G2519 Trifolium pratense HOM05D000553 ORTHO05D000460 6.7e-06 53.5 108 31.5
TAR633G2493 Trochodendron aralioides HOM05D000553 ORTHO05D000460 6.7e-06 53.5 108 30.6
BcaC05g29633 Brassica carinata HOM05D000553 ORTHO05D000460 8.8e-06 53.1 103 32.0
ClCG11G017850 Citrullus lanatus HOM05D000553 ORTHO05D000460 8.8e-06 53.1 102 32.4
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 8.8e-06 53.1 33 63.6
Dinv23094 Davidia involucrata HOM05D000553 ORTHO05D000460 8.8e-06 53.1 103 31.1
FAN09G0351 Fragaria x ananassa HOM05D000553 ORTHO05D000460 8.8e-06 53.1 103 31.1
Glyma.07G148700 Glycine max HOM05D000553 ORTHO05D000460 8.8e-06 53.1 103 32.0
Psat3g129640 Pisum sativum HOM05D000553 ORTHO05D000460 8.8e-06 53.1 103 33.0
Rhsim03G0142200 Rhododendron simsii HOM05D000553 ORTHO05D000460 8.8e-06 53.1 108 31.5
Zm00001eb053850 Zea mays HOM05D000553 ORTHO05D000460 8.8e-06 53.1 108 31.5


User provided reference genes

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