Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 0.0e+00 1172.9 576 100.0
Sopen10g001570 Solanum pennellii HOM05D005971 ORTHO05D007459 0.0e+00 1127.9 576 95.7
CAN.G492.69 Capsicum annuum HOM05D005971 ORTHO05D007459 1.3e-302 1042.3 573 89.9
Nitab4.5_0000611g0060 Nicotiana tabacum HOM05D005971 ORTHO05D007459 6.9e-291 1003.4 587 84.7
Peaxi162Scf00267g01016 Petunia axillaris HOM05D005971 ORTHO05D007459 5.3e-275 950.7 569 80.8
Solyc10g005600.4 Solanum lycopersicum HOM05D005971 ORTHO05D007459 8.5e-265 916.8 576 81.4
Nitab4.5_0004488g0030 Nicotiana tabacum HOM05D005971 ORTHO05D007459 2.7e-263 911.8 608 76.5
Dinv19623 Davidia involucrata HOM05D005971 ORTHO05D007459 2.4e-203 712.6 576 61.3
CSS0033662 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 6.7e-185 651.4 549 58.5
CSS0049989 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 1.3e-180 637.1 549 57.9
Migut.M01561 Erythranthe guttata HOM05D005971 ORTHO05D007459 1.3e-177 627.1 574 54.0
Actinidia35435 Actinidia chinensis HOM05D005971 ORTHO05D007459 3.3e-176 622.5 578 55.2
Cc05_g16010 Coffea canephora HOM05D005971 ORTHO05D007459 7.4e-176 621.3 572 54.7
Cfa019419 Carpinus fangiana HOM05D005971 ORTHO05D007459 3.7e-175 619.0 575 54.8
Lj1C905G3 Lonicera japonica HOM05D005971 ORTHO05D007459 3.1e-174 615.9 575 53.2
TAR626G0017 Trochodendron aralioides HOM05D005971 ORTHO05D007459 1.2e-173 614.0 587 52.3
Oeu052011.1 Olea europaea HOM05D005971 ORTHO05D007459 2.6e-173 612.8 559 54.9
SGA_v2.0_scaffold7G03577 Striga asiatica HOM05D005971 ORTHO05D007459 5.3e-166 588.6 561 53.7
DCAR_009638 Daucus carota HOM05D005971 ORTHO05D007459 1.5e-165 587.0 580 51.6
Atru.chr12.2179 Acer truncatum HOM05D005971 ORTHO05D007459 8.5e-164 581.3 579 50.3
Atru.chr12.2184 Acer truncatum HOM05D005971 ORTHO05D007459 1.9e-163 580.1 579 50.1
MD05G1219300 Malus domestica HOM05D005971 ORTHO05D007459 2.7e-162 576.2 577 51.5
Hma1.2p1_0637F.1_g193590 Hydrangea macrophylla HOM05D005971 ORTHO05D007459 1.5e-160 570.5 635 49.8
QL04p073974 Quercus lobata HOM05D005971 ORTHO05D007459 3.3e-160 569.3 577 51.5
Ciclev10018677m.g Citrus clementina HOM05D005971 ORTHO05D007459 2.8e-159 566.2 576 50.7
Sabra16G0310100 Salix brachista HOM05D005971 ORTHO05D007459 3.7e-159 565.8 580 50.2
Potri.001G457550 Populus trichocarpa HOM05D005971 ORTHO05D007459 4.8e-159 565.5 570 49.6
Manes.14G015836 Manihot esculenta HOM05D005971 ORTHO05D007459 1.2e-157 560.8 575 49.2
FAN11G3334 Fragaria x ananassa HOM05D005971 ORTHO05D007459 3.0e-153 546.2 578 48.3
FAN16G0465 Fragaria x ananassa HOM05D005971 ORTHO05D007459 3.9e-153 545.8 578 48.6
TWI39G0032 Tripterygium wilfordii HOM05D005971 ORTHO05D007459 3.3e-152 542.7 575 49.9
RcHm_v2.0_Chr5g0026671 Rosa chinensis HOM05D005971 ORTHO05D007459 5.7e-152 542.0 578 48.1
FvH4_3g15860 Fragaria vesca HOM05D005971 ORTHO05D007459 1.3e-151 540.8 578 47.6
Sc06g0001560 Simmondsia chinensis HOM05D005971 ORTHO05D007459 4.8e-151 538.9 568 47.5
Duzib268G0338 Durio zibethinus HOM05D005971 ORTHO05D007459 1.4e-150 537.3 572 48.4
PSO675G3107 Papaver somniferum HOM05D005971 ORTHO05D007459 1.5e-147 527.3 575 45.9
ClCG11G016380 Citrullus lanatus HOM05D005971 ORTHO05D007459 7.2e-147 525.0 572 46.7
CANSAT80G2256 Cannabis sativa HOM05D005971 ORTHO05D007459 9.4e-147 524.6 580 47.8
Medtr2g069560 Medicago truncatula HOM05D005971 ORTHO05D007459 1.0e-145 521.2 573 46.1
Gohir.D13G157500 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.8e-145 520.4 569 48.9
Gorai.013G178300 Gossypium raimondii HOM05D005971 ORTHO05D007459 1.8e-145 520.4 573 48.5
SalBow8G3201 Salvia bowleyana HOM05D005971 ORTHO05D007459 3.0e-145 519.6 590 45.6
PSO017G5934 Papaver somniferum HOM05D005971 ORTHO05D007459 3.3e-144 516.2 576 45.5
Glyma.15G255000 Glycine max HOM05D005971 ORTHO05D007459 4.4e-144 515.8 575 46.1
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 7.4e-144 515.0 571 46.2
Lsat_1_v5_gn_7_71401 Lactuca sativa HOM05D005971 ORTHO05D007459 7.4e-144 515.0 585 49.4
EL10Ac2g03354 Beta vulgaris HOM05D005971 ORTHO05D007459 9.7e-144 514.6 552 46.9
ECA240G1928 Erigeron canadensis HOM05D005971 ORTHO05D007459 4.8e-143 512.3 561 49.0
Ca_03684_v3 Cicer arietinum L. HOM05D005971 ORTHO05D007459 8.2e-143 511.5 573 45.5
arahy.Tifrunner.gnm1.ann1.MUD8D6 Arachis hypogaea HOM05D005971 ORTHO05D007459 1.1e-142 511.1 579 45.6
TPR.G9756 Trifolium pratense HOM05D005971 ORTHO05D007459 1.1e-142 511.1 573 45.2
Sed0013026 Sechium edule HOM05D005971 ORTHO05D007459 9.1e-142 508.1 572 45.6
Lj3g0007743 Lotus japonicus HOM05D005971 ORTHO05D007459 5.9e-141 505.4 575 44.7
Psat1g011400 Pisum sativum HOM05D005971 ORTHO05D007459 2.9e-140 503.1 570 46.0
THA.LOC104822751 Tarenaya hassleriana HOM05D005971 ORTHO05D007459 5.0e-140 502.3 574 46.2
HanXRQChr05g0160991 Helianthus annuus HOM05D005971 ORTHO05D007459 1.5e-139 500.7 566 46.6
Lalb_Chr25g0285011 Lupinus albus HOM05D005971 ORTHO05D007459 1.9e-139 500.4 579 45.6
Eucgr.F03182 Eucalyptus grandis HOM05D005971 ORTHO05D007459 2.5e-139 500.0 577 47.1
Ah.06g185720 Amaranthus hybridus HOM05D005971 ORTHO05D007459 7.2e-139 498.4 577 42.5
A10p02830 Brassica napus HOM05D005971 ORTHO05D007459 2.3e-137 493.4 574 44.1
BolC5t29039H Brassica oleracea HOM05D005971 ORTHO05D007459 1.5e-136 490.7 574 44.4
PGR031G0315 Punica granatum HOM05D005971 ORTHO05D007459 2.6e-136 490.0 571 44.8
MBI02_g40085_MAGBIO Magnolia biondii HOM05D005971 ORTHO05D007459 4.4e-136 489.2 600 43.5
Phvul.005G056400 Phaseolus vulgaris HOM05D005971 ORTHO05D007459 7.5e-136 488.4 575 44.2
C05p02580 Brassica napus HOM05D005971 ORTHO05D007459 4.8e-135 485.7 574 44.3
CARHR003720 Cardamine hirsuta HOM05D005971 ORTHO05D007459 8.3e-135 485.0 574 43.9
AL1G14000 Arabidopsis lyrata HOM05D005971 ORTHO05D007459 1.4e-134 484.2 576 43.6
AT1G04390 Arabidopsis thaliana HOM05D005971 ORTHO05D007459 2.4e-134 483.4 574 43.7
Aa31LG1G20480 Aethionema arabicum HOM05D005971 ORTHO05D007459 4.1e-134 482.6 574 43.6
Carub.0001s0356 Capsella rubella HOM05D005971 ORTHO05D007459 7.7e-133 478.4 574 44.4
Sp1g03210 Schrenkiella parvula HOM05D005971 ORTHO05D007459 7.7e-133 478.4 574 43.0
vmacro09786 Vaccinium macrocarpon HOM05D005971 ORTHO05D007459 1.0e-132 478.0 573 45.2
GSVIVG01020430001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.6e-130 470.7 571 44.7
Aqoxy2G04113 Aquilegia oxysepala HOM05D005971 ORTHO05D007459 2.1e-130 470.3 587 44.8
Rhsim04G0005800 Rhododendron simsii HOM05D005971 ORTHO05D007459 1.4e-126 457.6 698 39.0
AUR62038398 Chenopodium quinoa HOM05D005971 ORTHO05D007459 4.1e-118 429.5 575 40.9
Peaxi162Scf01123g00003 Petunia axillaris HOM05D005971 ORTHO05D007459 2.0e-117 427.2 436 55.3
GSVIVG01020427001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.9e-115 420.6 549 42.8
Gohir.A13G153066 Gossypium hirsutum HOM05D005971 ORTHO05D007459 4.3e-115 419.5 422 50.0
Prupe.4G140600 Prunus persica HOM05D005971 ORTHO05D007459 5.6e-115 419.1 500 44.6
Thhalv10006788m.g Eutrema salsugineum HOM05D005971 ORTHO05D007459 4.7e-114 416.0 464 45.9
BraA10t42550Z Brassica rapa HOM05D005971 ORTHO05D007459 7.5e-112 408.7 466 44.4
ATR0165G004 Amborella trichopoda HOM05D005971 ORTHO05D007459 1.6e-106 391.0 567 38.4
MELO3C010564.2 Cucumis melo HOM05D005971 ORTHO05D007459 2.0e-104 384.0 455 44.2
Hund12466 Selenicereus undatus HOM05D005971 ORTHO05D007459 9.9e-96 355.1 443 43.3
Nn7g37820 Nelumbo nucifera HOM05D005971 ORTHO05D007459 1.6e-85 321.2 393 44.0
Thecc.07G154200 Theobroma cacao HOM05D005971 ORTHO05D007459 2.3e-84 317.4 377 46.2
FAN21G1476 Fragaria x ananassa HOM05D005971 ORTHO05D007459 9.0e-81 305.4 569 33.4
Cpa.g.sc10.37 Carica papaya HOM05D005971 ORTHO05D007459 8.4e-79 298.9 358 46.1
VMungo1080G0173 Vigna mungo HOM05D005971 ORTHO05D007459 2.3e-76 290.8 384 40.9
Zm00001eb273960 Zea mays HOM05D005971 ORTHO05D007459 1.8e-65 254.6 419 37.2
Pp3c6_21780 Physcomitrium patens HOM05D005971 ORTHO05D007459 5.3e-65 253.1 574 28.0
Cpa.g.sc10.38 Carica papaya HOM05D005971 ORTHO05D007459 2.3e-60 237.7 210 51.0
HPP92_026348 Vanilla planifolia HOM05D005971 ORTHO05D007459 5.1e-60 236.5 311 36.7
Mapoly0060s0028 Marchantia polymorpha HOM05D005971 ORTHO05D007459 6.9e-57 226.1 575 28.7
Nn7g37821 Nelumbo nucifera HOM05D005971 ORTHO05D007459 2.6e-56 224.2 191 52.4
CDE12G0091 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 1.1e-54 218.8 373 34.3
unitig_26.g10082 Utricularia gibba HOM05D005971 ORTHO05D007459 3.9e-52 210.3 194 51.0
Peaxi162Scf01123g00008 Petunia axillaris HOM05D005971 ORTHO05D007459 1.7e-47 194.9 125 77.6
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 5.5e-46 189.9 143 61.5
arahy.Tifrunner.gnm1.ann1.Q40ZT9 Arachis hypogaea HOM05D005971 ORTHO05D007459 1.0e-39 169.1 145 51.7
VMungo1080G1570 Vigna mungo HOM05D005971 ORTHO05D007459 1.1e-38 165.6 140 53.6
Zm00001eb395680 Zea mays HOM05D005971 ORTHO05D007459 6.1e-29 133.3 260 31.5
GSVIVG01020425001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.8e-28 131.7 142 47.2
COL.COLO4_20820 Corchorus olitorius HOM05D005971 ORTHO05D007459 6.5e-23 113.2 132 47.0
Glyma.08G171633 Glycine max HOM05D005971 ORTHO05D007459 3.2e-22 110.9 92 55.4
CAN.G1199.4 Capsicum annuum HOM05D002053 ORTHO05D007459 1.4e-17 95.5 97 50.5
CDE12G0613 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 4.2e-14 84.0 95 40.0


User provided reference genes

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