Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 4.4e-49 197.6 97 100.0
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 1.9e-47 192.2 97 96.9
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 1.9e-47 192.2 97 96.9
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 2.3e-45 185.3 97 92.8
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.2e-38 162.9 97 82.5
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 5.8e-33 144.1 97 68.0
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 5.8e-33 144.1 97 68.0
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 7.6e-33 143.7 97 69.1
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 7.6e-33 143.7 97 68.0
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 7.6e-33 143.7 97 67.0
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 4.9e-32 141.0 97 70.1
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 8.4e-32 140.2 97 67.0
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 1.1e-31 139.8 97 67.0
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.1e-31 139.8 88 73.9
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.1e-31 139.8 77 83.1
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 4.2e-31 137.9 97 69.1
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 4.2e-31 137.9 97 67.0
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 9.3e-31 136.7 97 64.9
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 9.3e-31 136.7 97 64.9
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.2e-30 136.3 77 85.7
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.2e-30 136.3 97 63.9
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 2.1e-30 135.6 97 64.9
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 2.7e-30 135.2 97 62.9
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 3.5e-30 134.8 97 62.9
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 7.9e-30 133.7 97 61.9
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 7.9e-30 133.7 97 64.9
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 1.8e-29 132.5 97 62.9
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 3.0e-29 131.7 97 66.0
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 3.9e-29 131.3 97 61.9
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 5.1e-29 131.0 97 60.8
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 5.1e-29 131.0 97 60.8
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 5.1e-29 131.0 97 62.9
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 5.1e-29 131.0 96 64.6
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 5.1e-29 131.0 97 62.9
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 6.7e-29 130.6 97 64.9
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 6.7e-29 130.6 87 70.1
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.1e-28 129.8 88 68.2
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 1.5e-28 129.4 97 60.8
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 3.3e-28 128.3 97 58.8
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 3.3e-28 128.3 97 60.8
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 3.3e-28 128.3 98 62.2
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 5.6e-28 127.5 99 62.6
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 5.6e-28 127.5 97 60.8
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 7.4e-28 127.1 97 67.0
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 2.1e-27 125.6 97 62.9
Nn1g09635 Nelumbo nucifera HOM05D004498 ORTHO05D005300 2.1e-27 125.6 97 59.8
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 2.1e-27 125.6 97 59.8
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 3.7e-27 124.8 100 59.0
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 3.7e-27 124.8 98 60.2
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 4.8e-27 124.4 110 55.5
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 4.8e-27 124.4 110 55.5
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 4.8e-27 124.4 106 56.6
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 4.8e-27 124.4 110 55.5
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 6.2e-27 124.0 97 57.7
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 6.2e-27 124.0 97 58.8
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 8.1e-27 123.6 97 59.8
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 1.1e-26 123.2 97 57.7
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.4e-26 122.1 97 58.8
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 5.3e-26 120.9 96 60.4
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.2e-25 119.8 97 58.8
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 2.0e-25 119.0 94 58.5
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 2.6e-25 118.6 96 58.3
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 2.6e-25 118.6 96 58.3
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 2.6e-25 118.6 96 58.3
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 2.6e-25 118.6 97 57.7
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 3.4e-25 118.2 97 59.8
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 4.5e-25 117.9 80 68.8
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 4.5e-25 117.9 94 57.4
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 4.5e-25 117.9 96 59.4
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 4.5e-25 117.9 96 59.4
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 5.8e-25 117.5 97 57.7
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 5.8e-25 117.5 97 57.7
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 3.8e-24 114.8 97 57.7
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 4.9e-24 114.4 94 56.4
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 4.9e-24 114.4 78 67.9
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 6.4e-24 114.0 96 58.3
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 1.1e-23 113.2 98 53.1
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 1.4e-23 112.8 97 57.7
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 1.4e-23 112.8 97 57.7
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 1.9e-23 112.5 93 59.1
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 2.4e-23 112.1 99 54.5
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 3.2e-23 111.7 87 59.8
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 4.2e-23 111.3 94 55.3
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 4.2e-23 111.3 78 65.4
vmacro22806 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 2.7e-22 108.6 77 64.9
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 2.7e-22 108.6 97 55.7
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 4.6e-22 107.8 94 54.3
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 1.8e-21 105.9 77 62.3
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 3.0e-21 105.1 88 62.5
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 3.9e-21 104.8 77 68.8
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 5.1e-21 104.4 94 55.3
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 6.7e-21 104.0 94 54.3
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 3.3e-20 101.7 98 50.0
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 5.6e-20 100.9 78 60.3
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 5.6e-20 100.9 78 60.3
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 1.6e-19 99.4 94 51.1
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 4.8e-19 97.8 77 62.3
SalBow7G0435 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.4e-18 96.3 85 48.2
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 2.4e-18 95.5 65 64.6
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 1.5e-17 92.8 96 49.0
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 1.9e-15 85.9 61 60.7
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 1.6e-14 82.8 90 46.7
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.6e-14 82.8 69 59.4
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 6.0e-14 80.9 55 67.3
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 3.0e-13 78.6 63 61.9
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 8.7e-13 77.0 70 51.4
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 1.6e-11 72.8 98 40.8
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 1.6e-11 72.8 98 40.8
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 1.2e-09 66.6 38 78.9
Lj3g0020155 Lotus japonicus HOM05D004498 ORTHO05D005300 3.8e-08 61.6 51 60.8
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 1.4e-07 59.7 90 36.7
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 9.3e-07 57.0 94 37.2
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 2.7e-06 55.5 94 36.2


User provided reference genes

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