Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402005827 Solanum tuberosum HOM05D003118 ORTHO05D003618 9.8e-249 863.2 508 100.0
Solyc08g008130.4 Solanum lycopersicum HOM05D003118 ORTHO05D003618 1.2e-225 786.6 511 86.7
Sopen08g003990 Solanum pennellii HOM05D003118 ORTHO05D003618 7.6e-225 783.9 511 86.5
Nitab4.5_0002231g0040 Nicotiana tabacum HOM05D003118 ORTHO05D003618 9.4e-167 590.9 519 71.7
Nitab4.5_0005339g0020 Nicotiana tabacum HOM05D003118 ORTHO05D003618 1.7e-160 570.1 511 64.6
Peaxi162Scf00102g01644 Petunia axillaris HOM05D003118 ORTHO05D003618 2.1e-121 440.3 532 53.2
Dinv37591 Davidia involucrata HOM05D003118 ORTHO05D003618 5.1e-64 249.6 564 38.7
Dinv38896 Davidia involucrata HOM05D003118 ORTHO05D003618 9.7e-55 218.8 567 37.6
CSS0022485 Camellia sinensis var. sinensis HOM05D003118 ORTHO05D003618 4.2e-50 203.4 564 36.7
Cc08_g15310 Coffea canephora HOM05D003118 ORTHO05D003618 9.1e-45 185.7 560 30.9
Rhsim02G0236100 Rhododendron simsii HOM05D003118 ORTHO05D003618 4.1e-37 160.2 564 31.7
TAR629G1012 Trochodendron aralioides HOM05D003118 ORTHO05D003618 7.0e-37 159.5 476 33.2
Actinidia28342 Actinidia chinensis HOM05D003118 ORTHO05D003618 1.0e-35 155.6 467 34.0
QL93p0326_0020 Quercus lobata HOM05D003118 ORTHO05D003618 1.1e-34 152.1 483 32.7
Hma1.2p1_0216F.1_g091120 Hydrangea macrophylla HOM05D003118 ORTHO05D003618 4.2e-34 150.2 467 33.2
vmacro11412 Vaccinium macrocarpon HOM05D003118 ORTHO05D003618 5.6e-34 149.8 562 31.1
QL02p033307 Quercus lobata HOM05D003118 ORTHO05D003618 9.5e-34 149.1 481 32.4
Haze_08748 Corylus avellana HOM05D003118 ORTHO05D003618 1.6e-33 148.3 447 33.6
TAR375G0293 Trochodendron aralioides HOM05D003118 ORTHO05D003618 2.1e-33 147.9 480 31.9
MSTRG.13862 Avicennia marina HOM05D003118 ORTHO05D003618 2.8e-33 147.5 449 34.7
Cfa012251 Carpinus fangiana HOM05D003118 ORTHO05D003618 3.6e-33 147.1 441 33.6
Haze_08750 Corylus avellana HOM05D003118 ORTHO05D003618 3.6e-33 147.1 431 32.7
Thecc.03G287000 Theobroma cacao HOM05D003118 ORTHO05D003618 1.2e-31 142.1 462 35.1
Atru.chr9.2107 Acer truncatum HOM05D003118 ORTHO05D003618 2.6e-31 141.0 572 30.9
Duzib205G0707 Durio zibethinus HOM05D003118 ORTHO05D003618 8.3e-30 136.0 462 33.5
Gorai.004G137500 Gossypium raimondii HOM05D003118 ORTHO05D003618 8.3e-30 136.0 440 34.3
TWI81G0015 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 1.1e-29 135.6 450 32.2
ClCG01G002310 Citrullus lanatus HOM05D003118 ORTHO05D003618 5.9e-28 129.8 274 38.7
MD14G1112600 Malus domestica HOM05D003118 ORTHO05D003618 2.3e-27 127.9 463 31.1
CiPaw.12G088800 Carya illinoinensis HOM05D003118 ORTHO05D003618 2.5e-26 124.4 303 34.7
Manes.02G016600 Manihot esculenta HOM05D003118 ORTHO05D003618 2.5e-26 124.4 280 37.9
Ciclev10024541m.g Citrus clementina HOM05D003118 ORTHO05D003618 3.3e-26 124.0 435 32.4
COL.COLO4_08355 Corchorus olitorius HOM05D003118 ORTHO05D003618 8.0e-25 119.4 433 33.5
SalBow8G1076 Salvia bowleyana HOM05D003118 ORTHO05D003618 5.2e-24 116.7 439 30.8
Prupe.5G107000 Prunus persica HOM05D003118 ORTHO05D003618 6.8e-24 116.3 473 30.4
Oeu040820.1 Olea europaea HOM05D003118 ORTHO05D003618 8.9e-24 115.9 354 34.5
Sed0003885 Sechium edule HOM05D003118 ORTHO05D003618 8.9e-24 115.9 443 31.4
Nn6g32462 Nelumbo nucifera HOM05D003118 ORTHO05D003618 2.6e-23 114.4 296 37.2
Lalb_Chr09g0320801 Lupinus albus HOM05D003118 ORTHO05D003618 7.5e-23 112.8 446 30.9
Gohir.D08G134400 Gossypium hirsutum HOM05D003118 ORTHO05D003618 1.3e-22 112.1 438 31.7
Sabra03G0095300 Salix brachista HOM05D003118 ORTHO05D003618 1.1e-21 109.0 479 32.4
Gohir.A08G114000 Gossypium hirsutum HOM05D003118 ORTHO05D003618 1.9e-21 108.2 436 32.3
MD06G1091800 Malus domestica HOM05D003118 ORTHO05D003618 1.9e-21 108.2 464 28.0
Potri.003G133000 Populus trichocarpa HOM05D003118 ORTHO05D003618 3.2e-21 107.5 459 30.9
FAN18G4078 Fragaria x ananassa HOM05D003118 ORTHO05D003618 2.7e-20 104.4 481 30.8
MELO3C005717.2 Cucumis melo HOM05D003118 ORTHO05D003618 3.5e-20 104.0 335 32.5
Migut.E01210 Erythranthe guttata HOM05D003118 ORTHO05D003618 1.0e-19 102.4 429 29.1
TWI14G1154 Tripterygium wilfordii HOM05D003118 ORTHO05D003618 1.0e-19 102.4 283 33.2
CsaV3_5G002370 Cucumis sativus L. HOM05D003118 ORTHO05D003618 2.3e-19 101.3 467 30.0
FvH4_5g03250 Fragaria vesca HOM05D003118 ORTHO05D003618 2.3e-19 101.3 476 30.9
Sed0011553 Sechium edule HOM05D003118 ORTHO05D003618 2.3e-19 101.3 460 31.1
FAN04G2118 Fragaria x ananassa HOM05D003118 ORTHO05D003618 8.6e-19 99.4 464 29.3
FAN13G0863 Fragaria x ananassa HOM05D003118 ORTHO05D003618 1.9e-18 98.2 474 30.6
FAN04G2035 Fragaria x ananassa HOM05D003118 ORTHO05D003618 2.5e-18 97.8 466 29.4
CiPaw.11G129400 Carya illinoinensis HOM05D003118 ORTHO05D003618 3.3e-18 97.4 244 33.2
SGA_v2.0_scaffold173G39132 Striga asiatica HOM05D003118 ORTHO05D003618 3.3e-18 97.4 399 29.3
LjContig00312_ERROPOS870357g0002156 Lotus japonicus HOM05D003118 ORTHO05D003618 4.3e-18 97.1 388 28.6
MBI07_g11721_MAGBIO Magnolia biondii HOM05D003118 ORTHO05D003618 4.3e-18 97.1 420 29.3
Aqoxy7G00197 Aquilegia oxysepala HOM05D003118 ORTHO05D003618 9.5e-18 95.9 462 28.6
Cfa003868 Carpinus fangiana HOM05D003118 ORTHO05D003618 1.6e-17 95.1 267 31.5
Ca_24533_v3 Cicer arietinum L. HOM05D003118 ORTHO05D003618 2.8e-17 94.4 306 31.7
Medtr5g009920 Medicago truncatula HOM05D003118 ORTHO05D003618 3.6e-17 94.0 263 31.2
PGR042G1679 Punica granatum HOM05D003118 ORTHO05D003618 3.1e-16 90.9 432 30.6
Phvul.002G160400 Phaseolus vulgaris HOM05D003118 ORTHO05D003618 8.9e-16 89.4 309 30.1
Glyma.11G020900 Glycine max HOM05D003118 ORTHO05D003618 3.4e-15 87.4 235 32.3
Sc01g0009900 Simmondsia chinensis HOM05D003118 ORTHO05D003618 3.4e-15 87.4 348 31.9
CANSAT21G1093 Cannabis sativa HOM05D003118 ORTHO05D003618 7.5e-15 86.3 339 28.9
arahy.Tifrunner.gnm1.ann1.9S2WM4 Arachis hypogaea HOM05D003118 ORTHO05D003618 9.8e-15 85.9 313 29.1
arahy.Tifrunner.gnm1.ann1.78DXCF Arachis hypogaea HOM05D003118 ORTHO05D003618 1.3e-14 85.5 418 26.6
SGA_v2.0_scaffold144G35901 Striga asiatica HOM05D003118 ORTHO05D003618 1.3e-14 85.5 383 30.0
Eucgr.E00782 Eucalyptus grandis HOM05D003118 ORTHO05D003618 2.2e-14 84.7 447 29.1
Psat2g183920 Pisum sativum HOM05D003118 ORTHO05D003618 2.2e-14 84.7 258 29.5
DCAR_004609 Daucus carota HOM05D003118 ORTHO05D003618 2.9e-14 84.3 339 31.3
TPR.G6616 Trifolium pratense HOM05D003118 ORTHO05D003618 3.7e-14 84.0 264 30.3
RcHm_v2.0_Chr7g0196521 Rosa chinensis HOM05D003118 ORTHO05D003618 4.9e-14 83.6 461 28.6
VMungo1215G2430 Vigna mungo HOM05D003118 ORTHO05D003618 4.9e-14 83.6 437 28.4
FAN08G3653 Fragaria x ananassa HOM05D003118 ORTHO05D003618 8.3e-14 82.8 452 30.1
SHI07074 Sapria himalayana HOM05D003118 ORTHO05D003618 1.1e-13 82.4 259 31.3
Lj2A177T50 Lonicera japonica HOM05D003118 ORTHO05D003618 1.4e-13 82.0 442 29.9
Oeu042365.1 Olea europaea HOM05D003118 ORTHO05D003618 1.9e-13 81.6 346 32.7
Haze_15568 Corylus avellana HOM05D003118 ORTHO05D003618 7.1e-13 79.7 309 29.8
DCAR_000636 Daucus carota HOM05D003118 ORTHO05D003618 1.2e-12 79.0 242 30.2
Glyma.01G222500 Glycine max HOM05D003118 ORTHO05D003618 2.1e-12 78.2 235 33.2
PSO384G4267 Papaver somniferum HOM05D003118 ORTHO05D003618 3.5e-12 77.4 338 31.1
GSVIVG01019423001 Vitis vinifera HOM05D003118 ORTHO05D003618 4.6e-12 77.0 142 42.3
PSO266G0031 Papaver somniferum HOM05D003118 ORTHO05D003618 6.0e-12 76.6 321 31.2
GSVIVG01026971001 Vitis vinifera HOM05D003118 ORTHO05D003618 7.3e-10 69.7 218 32.1
LjContig00312_ERROPOS870357g0013212 Lotus japonicus HOM05D003118 ORTHO05D003618 9.5e-10 69.3 430 26.3
Hund11431 Selenicereus undatus HOM05D003118 ORTHO05D003618 1.6e-09 68.6 401 26.9
Ah.12g052020 Amaranthus hybridus HOM05D003118 ORTHO05D003618 1.1e-08 65.9 445 27.9
ECA240G3271 Erigeron canadensis HOM05D000115 ORTHO05D003618 8.9e-08 62.8 246 31.3
Ah.12g051980 Amaranthus hybridus HOM05D003118 ORTHO05D003618 1.2e-07 62.4 435 27.8
HanXRQChr13g0416081 Helianthus annuus HOM05D003118 ORTHO05D003618 3.4e-07 60.8 247 29.1
QL04p055623 Quercus lobata HOM05D003118 ORTHO05D003618 1.7e-06 58.5 89 39.3
EL10Ac5g12842 Beta vulgaris HOM05D003118 ORTHO05D003618 2.9e-06 57.8 396 26.3
AUR62019759 Chenopodium quinoa HOM05D003118 ORTHO05D003618 8.4e-06 56.2 278 27.7
SEGI_20510 Sequoiadendron giganteum HOM05D003118 ORTHO05D003618 8.4e-06 56.2 335 26.3


User provided reference genes

Program Settings