Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402004821 Solanum tuberosum HOM05D007712 ORTHO05D009755 4.6e-22 107.1 57 100.0
Solyc08g078480.3 Solanum lycopersicum HOM05D007712 ORTHO05D009755 1.1e-20 102.4 55 98.2
Nitab4.5_0002289g0090 Nicotiana tabacum HOM05D007712 ORTHO05D009755 2.2e-19 98.2 53 96.2
Nitab4.5_0001381g0130 Nicotiana tabacum HOM05D007712 ORTHO05D009755 7.6e-17 89.7 49 93.9
Gohir.D12G218700 Gossypium hirsutum HOM05D007712 ORTHO05D009755 1.3e-16 89.0 54 83.3
Gorai.008G234300 Gossypium raimondii HOM05D007712 ORTHO05D009755 1.3e-16 89.0 54 83.3
Prupe.5G067000 Prunus persica HOM05D007712 ORTHO05D009755 6.5e-16 86.7 53 81.1
Thecc.03G249200 Theobroma cacao HOM05D007712 ORTHO05D009755 1.1e-15 85.9 53 79.2
MD06G1056600 Malus domestica HOM05D007712 ORTHO05D009755 1.4e-15 85.5 53 79.2
CSS0007152 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 1.9e-15 85.1 53 79.2
CAN.G1178.28 Capsicum annuum HOM05D007712 ORTHO05D009755 1.9e-15 85.1 49 91.8
Psat4g072600 Pisum sativum HOM05D007712 ORTHO05D009755 1.9e-15 85.1 58 77.6
Medtr4g100770 Medicago truncatula HOM05D007712 ORTHO05D009755 2.5e-15 84.7 58 77.6
AL7G38040 Arabidopsis lyrata HOM05D007712 ORTHO05D009755 3.2e-15 84.3 54 81.5
CARHR223220 Cardamine hirsuta HOM05D007712 ORTHO05D009755 3.2e-15 84.3 54 81.5
Lj4g0003995 Lotus japonicus HOM05D007712 ORTHO05D009755 3.2e-15 84.3 53 81.1
Sp7g15330 Schrenkiella parvula HOM05D007712 ORTHO05D009755 3.2e-15 84.3 54 81.5
TWI60G0592 Tripterygium wilfordii HOM05D007712 ORTHO05D009755 4.2e-15 84.0 58 74.1
MD04G1062500 Malus domestica HOM05D007712 ORTHO05D009755 5.5e-15 83.6 53 77.4
AT4G16695 Arabidopsis thaliana HOM05D007712 ORTHO05D009755 7.2e-15 83.2 54 79.6
Lsat_1_v5_gn_6_18000 Lactuca sativa HOM05D007712 ORTHO05D009755 7.2e-15 83.2 53 77.4
RcHm_v2.0_Chr7g0203631 Rosa chinensis HOM05D007712 ORTHO05D009755 1.6e-14 82.0 58 75.9
HanXRQChr16g0510951 Helianthus annuus HOM05D007712 ORTHO05D009755 2.1e-14 81.6 53 75.5
CiPaw.11G080700 Carya illinoinensis HOM05D007712 ORTHO05D009755 3.6e-14 80.9 53 77.4
COL.COLO4_37150 Corchorus olitorius HOM05D007712 ORTHO05D009755 4.6e-14 80.5 48 83.3
Manes.02G041000 Manihot esculenta HOM05D007712 ORTHO05D009755 6.1e-14 80.1 49 77.6
Cpa.g.sc29.177 Carica papaya HOM05D007712 ORTHO05D009755 7.9e-14 79.7 52 78.8
Gohir.A12G216100 Gossypium hirsutum HOM05D007712 ORTHO05D009755 1.0e-13 79.3 48 81.2
VMungo0251G2826 Vigna mungo HOM05D007712 ORTHO05D009755 1.0e-13 79.3 53 77.4
Hma1.2p1_0316F.1_g122970 Hydrangea macrophylla HOM05D007712 ORTHO05D009755 1.4e-13 79.0 47 80.9
PSO063G7306 Papaver somniferum HOM05D007712 ORTHO05D009755 1.4e-13 79.0 58 69.0
CSS0012443 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 2.3e-13 78.2 47 80.9
Glyma.05G061200 Glycine max HOM05D007712 ORTHO05D009755 2.3e-13 78.2 52 78.8
Glyma.17G143000 Glycine max HOM05D007712 ORTHO05D009755 2.3e-13 78.2 52 78.8
EL10Ac5g12378 Beta vulgaris HOM05D007712 ORTHO05D009755 3.0e-13 77.8 47 80.9
Duzib205G0100 Durio zibethinus HOM05D007712 ORTHO05D009755 3.0e-13 77.8 48 77.1
Ciclev10023737m.g Citrus clementina HOM05D007712 ORTHO05D009755 3.9e-13 77.4 47 78.7
PGR031G2779 Punica granatum HOM05D007712 ORTHO05D009755 3.9e-13 77.4 47 78.7
Ca_21974_v3 Cicer arietinum L. HOM05D007712 ORTHO05D009755 6.7e-13 76.6 52 75.0
Nn6g33914 Nelumbo nucifera HOM05D007712 ORTHO05D009755 6.7e-13 76.6 58 70.7
Aa31LG2G12880 Aethionema arabicum HOM05D007712 ORTHO05D009755 1.1e-12 75.9 48 79.2
BcaNung00160 Brassica carinata HOM05D007712 ORTHO05D009755 1.1e-12 75.9 48 79.2
Haze_07896 Corylus avellana HOM05D007712 ORTHO05D009755 1.1e-12 75.9 47 76.6
Duzib068G1393 Durio zibethinus HOM05D007712 ORTHO05D009755 1.1e-12 75.9 52 75.0
Phvul.003G221800 Phaseolus vulgaris HOM05D007712 ORTHO05D009755 1.1e-12 75.9 52 76.9
Migut.A01117 Erythranthe guttata HOM05D007712 ORTHO05D009755 1.5e-12 75.5 56 73.2
Nn1g00955 Nelumbo nucifera HOM05D007712 ORTHO05D009755 1.5e-12 75.5 54 72.2
CANSAT21G0844 Cannabis sativa HOM05D007712 ORTHO05D009755 1.9e-12 75.1 49 73.5
Eucgr.E00411 Eucalyptus grandis HOM05D007712 ORTHO05D009755 1.9e-12 75.1 59 67.8
A01p20590 Brassica napus HOM05D007712 ORTHO05D009755 2.5e-12 74.7 48 79.2
C01p25890 Brassica napus HOM05D007712 ORTHO05D009755 2.5e-12 74.7 48 79.2
BraA01t01987Z Brassica rapa HOM05D007712 ORTHO05D009755 2.5e-12 74.7 48 79.2
Carub.0007s2470 Capsella rubella HOM05D007712 ORTHO05D009755 2.5e-12 74.7 48 79.2
DCAR_006839 Daucus carota HOM05D007712 ORTHO05D009755 2.5e-12 74.7 52 73.1
ClCG01G004140 Citrullus lanatus HOM05D007712 ORTHO05D009755 3.3e-12 74.3 49 73.5
DCAR_008500 Daucus carota HOM05D007712 ORTHO05D009755 3.3e-12 74.3 52 71.2
Potri.003G078100 Populus trichocarpa HOM05D007712 ORTHO05D009755 3.3e-12 74.3 47 78.7
TAR629G1768 Trochodendron aralioides HOM05D007712 ORTHO05D009755 3.3e-12 74.3 52 71.2
Manes.01G082000 Manihot esculenta HOM05D007712 ORTHO05D009755 5.7e-12 73.6 47 74.5
HanXRQChr11g0345641 Helianthus annuus HOM05D007712 ORTHO05D009755 7.4e-12 73.2 47 74.5
Lalb_Chr16g0386781 Lupinus albus HOM05D007712 ORTHO05D009755 7.4e-12 73.2 53 75.5
CiPaw.12G051200 Carya illinoinensis HOM05D007712 ORTHO05D009755 1.3e-11 72.4 54 74.1
Duzib268G1849 Durio zibethinus HOM05D007712 ORTHO05D009755 1.3e-11 72.4 54 64.8
HanXRQChr13g0400821 Helianthus annuus HOM05D007712 ORTHO05D009755 1.3e-11 72.4 47 74.5
PSO782G1928 Papaver somniferum HOM05D007712 ORTHO05D009755 1.3e-11 72.4 52 69.2
ATR0317G046 Amborella trichopoda HOM05D007712 ORTHO05D009755 2.2e-11 71.6 52 67.3
BolC1t02534H Brassica oleracea HOM05D007712 ORTHO05D009755 2.2e-11 71.6 46 78.3
BcaC06g33508 Brassica carinata HOM05D007712 ORTHO05D009755 4.8e-11 70.5 51 74.5
C07p48200 Brassica napus HOM05D007712 ORTHO05D009755 4.8e-11 70.5 51 74.5
Sed0021045 Sechium edule HOM05D007712 ORTHO05D009755 4.8e-11 70.5 49 79.6
Lalb_Chr05g0221211 Lupinus albus HOM05D007712 ORTHO05D009755 6.3e-11 70.1 53 71.7
BolC7t45343H Brassica oleracea HOM05D007712 ORTHO05D009755 8.2e-11 69.7 44 79.5
Potri.001G156500 Populus trichocarpa HOM05D007712 ORTHO05D009755 8.2e-11 69.7 48 75.0
MELO3C005524.2 Cucumis melo HOM05D007712 ORTHO05D009755 1.1e-10 69.3 49 73.5
Pp3c5_22940 Physcomitrium patens HOM05D007712 ORTHO05D009755 1.1e-10 69.3 50 68.0
THA.LOC104815500 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 1.1e-10 69.3 48 75.0
Mapoly0033s0142 Marchantia polymorpha HOM05D007712 ORTHO05D009755 2.4e-10 68.2 47 68.1
vmacro00192 Vaccinium macrocarpon HOM05D007712 ORTHO05D009755 6.9e-10 66.6 49 65.3
BraA08t33255Z Brassica rapa HOM05D007712 ORTHO05D009755 9.1e-10 66.2 45 77.8
HPP92_021033 Vanilla planifolia HOM05D007712 ORTHO05D009755 2.6e-09 64.7 47 70.2
HPP92_027434 Vanilla planifolia HOM05D007712 ORTHO05D009755 2.6e-09 64.7 47 70.2
THA.LOC104815513 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 5.9e-09 63.5 38 86.8
unitig_744.g24472 Utricularia gibba HOM05D007712 ORTHO05D009755 1.3e-08 62.4 47 66.0
SHI02516 Sapria himalayana HOM05D007712 ORTHO05D009755 1.7e-08 62.0 46 69.6
FAN08G0196 Fragaria x ananassa HOM05D007712 ORTHO05D009755 3.2e-07 57.8 31 90.3
Os03g0102000 Oryza sativa ssp. japonica HOM05D007712 ORTHO05D009755 7.2e-07 56.6 57 56.1
FAN04G1285 Fragaria x ananassa HOM05D007712 ORTHO05D009755 1.2e-06 55.8 31 87.1
CBR_g755 Chara braunii HOM05D007712 ORTHO05D009755 1.6e-06 55.5 49 55.1
A03p50120 Brassica napus HOM05D007712 ORTHO05D009755 3.6e-06 54.3 46 63.0


User provided reference genes

Program Settings