Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402003025 Solanum tuberosum HOM05D000092 ORTHO05D000042 8.4e-134 480.3 238 100.0
PGSC0003DMG401016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.2e-91 338.2 241 73.9
Solyc04g005540.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 9.4e-85 317.4 243 70.0
Sopen04g001560 Solanum pennellii HOM05D000092 ORTHO05D000042 4.7e-84 315.1 237 69.6
Sopen04g001580 Solanum pennellii HOM05D000092 ORTHO05D000042 2.4e-80 302.8 237 66.7
Solyc04g005550.2 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.2e-79 300.4 237 66.2
CAN.G1161.13 Capsicum annuum HOM05D000092 ORTHO05D000042 1.5e-77 293.5 243 65.4
CAN.G1161.10 Capsicum annuum HOM05D000092 ORTHO05D000042 2.6e-74 282.7 243 62.6
CAN.G1161.16 Capsicum annuum HOM05D000092 ORTHO05D000042 8.3e-73 277.7 245 63.3
Solyc04g057850.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 6.1e-68 261.5 211 68.7
PGSC0003DMG401017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 8.0e-68 261.2 247 59.5
PGSC0003DMG402017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 8.0e-68 261.2 247 59.5
CAN.G1161.12 Capsicum annuum HOM05D000092 ORTHO05D000042 1.7e-65 253.4 238 58.4
CAN.G641.10 Capsicum annuum HOM05D000092 ORTHO05D000042 2.9e-62 242.7 241 60.6
CAN.G1161.58 Capsicum annuum HOM05D000092 ORTHO05D000042 9.5e-61 237.7 228 60.5
CAN.G960.2 Capsicum annuum HOM05D000092 ORTHO05D000042 1.2e-60 237.3 233 60.5
Peaxi162Scf00003g04724 Petunia axillaris HOM05D000092 ORTHO05D000042 1.2e-60 237.3 232 59.1
CAN.G1161.51 Capsicum annuum HOM05D000092 ORTHO05D000042 8.9e-59 231.1 240 58.3
Nitab4.5_0000358g0090 Nicotiana tabacum HOM05D000092 ORTHO05D000042 1.5e-58 230.3 260 53.1
CAN.G641.2 Capsicum annuum HOM05D000092 ORTHO05D000042 4.9e-57 225.3 237 57.8
Peaxi162Scf00003g04738 Petunia axillaris HOM05D000092 ORTHO05D000042 6.6e-54 214.9 229 55.5
Peaxi162Scf00000g00843 Petunia axillaris HOM05D000092 ORTHO05D001673 8.6e-54 214.5 256 48.8
Peaxi162Scf00007g00431 Petunia axillaris HOM05D000092 ORTHO05D000042 8.6e-54 214.5 254 50.0
CAN.G1161.53 Capsicum annuum HOM05D000092 ORTHO05D000042 3.6e-52 209.1 229 56.3
Peaxi162Scf00739g00123 Petunia axillaris HOM05D000092 ORTHO05D000042 6.2e-52 208.4 232 51.7
Sopen02g011670 Solanum pennellii HOM05D000092 ORTHO05D000042 1.4e-51 207.2 248 49.2
Solyc12g016220.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.7e-49 200.3 237 51.1
Sopen12g008030 Solanum pennellii HOM05D000092 ORTHO05D000042 1.7e-49 200.3 237 50.6
PGSC0003DMG402011427 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.4e-48 195.3 186 61.3
PGSC0003DMG401008349 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.1e-47 193.4 225 51.1
Solyc10g055080.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.5e-47 192.6 237 49.8
Sopen12g022450 Solanum pennellii HOM05D000092 ORTHO05D000042 3.0e-46 189.5 237 49.8
Sopen01g028960 Solanum pennellii HOM05D000092 ORTHO05D000042 6.6e-46 188.3 226 51.3
PGSC0003DMG400021477 Solanum tuberosum HOM05D000092 ORTHO05D000042 9.5e-45 184.5 190 54.7
Peaxi162Scf00003g00479 Petunia axillaris HOM05D000092 ORTHO05D000042 1.2e-44 184.1 236 50.0
CAN.G960.21 Capsicum annuum HOM05D000092 ORTHO05D000042 1.1e-43 181.0 166 63.9
PGSC0003DMG400021948 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.5e-42 177.2 214 49.1
CAN.G641.7 Capsicum annuum HOM05D000092 ORTHO05D000042 7.5e-42 174.9 237 48.5
Solyc12g044190.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 7.5e-42 174.9 237 46.8
Solyc10g055060.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 9.2e-40 167.9 236 46.6
CAN.G960.38 Capsicum annuum HOM05D000092 ORTHO05D000042 1.6e-39 167.2 243 47.7
Solyc02g036270.4 Solanum lycopersicum HOM05D000092 ORTHO05D000042 7.8e-39 164.9 178 52.2
PGSC0003DMG400019094 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.8e-33 146.0 235 41.3
PGSC0003DMG400028057 Solanum tuberosum HOM05D000092 ORTHO05D000042 4.2e-32 142.5 155 53.5
Sopen10g029640 Solanum pennellii HOM05D000092 ORTHO05D000042 7.8e-31 138.3 237 40.5
PGSC0003DMG400011425 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.5e-29 134.0 166 50.6
CAN.G379.26 Capsicum annuum HOM05D000092 ORTHO05D000042 3.5e-23 112.8 153 47.7
Sopen10g024940 Solanum pennellii HOM05D000092 ORTHO05D000042 7.8e-23 111.7 118 58.5
Solyc10g055120.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 6.9e-19 98.6 80 67.5
Solyc10g055180.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 9.0e-19 98.2 147 39.5
Sopen10g029660 Solanum pennellii HOM05D000092 ORTHO05D000042 7.6e-18 95.1 261 33.3
PGSC0003DMG401007575 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.9e-17 93.2 109 52.3
Solyc10g050050.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 4.6e-15 85.9 150 35.3
CSS0047500 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.1e-11 73.2 263 28.9
CiPaw.08G177100 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.0e-10 70.5 239 28.5
RcHm_v2.0_Chr7g0204231 Rosa chinensis HOM05D000092 ORTHO05D000042 3.4e-10 69.7 208 30.3
CiPaw.08G176800 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.5e-10 69.3 229 28.8
FAN06G5058 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.0e-09 68.2 201 28.4
CiPaw.08G169900 Carya illinoinensis HOM05D000092 ORTHO05D000042 3.8e-09 66.2 221 27.1
FAN16G0572 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.8e-09 66.2 201 28.4
Lsat_1_v5_gn_1_83140 Lactuca sativa HOM05D000092 ORTHO05D000042 3.8e-09 66.2 148 39.9
Peaxi162Scf00253g00314 Petunia axillaris HOM05D000092 ORTHO05D000042 3.8e-09 66.2 44 72.7
CiPaw.08G176000 Carya illinoinensis HOM05D000092 ORTHO05D000042 6.4e-09 65.5 276 26.8
RcHm_v2.0_Chr5g0016331 Rosa chinensis HOM05D000092 ORTHO05D000042 6.4e-09 65.5 244 29.9
MSTRG.6354 Avicennia marina HOM05D000092 ORTHO05D000042 8.4e-09 65.1 130 33.8
FAN06G3901 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.1e-08 64.7 201 27.9
Prupe.3G016700 Prunus persica HOM05D000092 ORTHO05D000042 1.4e-08 64.3 186 26.9
ECA248G3545 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.2e-08 63.2 148 38.5
FvH4_7g31140 Fragaria vesca HOM05D000092 ORTHO05D000042 5.5e-08 62.4 201 27.9
FvH4_3g04780 Fragaria vesca HOM05D000092 ORTHO05D000042 7.1e-08 62.0 201 27.9
FAN06G4836 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.1e-08 62.0 201 28.4
arahy.Tifrunner.gnm1.ann1.FV5VRM Arachis hypogaea HOM05D000092 ORTHO05D000042 9.3e-08 61.6 272 26.1
RcHm_v2.0_Chr7g0203421 Rosa chinensis HOM05D000092 ORTHO05D000042 1.6e-07 60.8 214 28.0
FAN06G3762 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.1e-07 60.5 201 27.9
ECA248G1304 Erigeron canadensis HOM05D000092 ORTHO05D000042 2.7e-07 60.1 177 33.9
MSTRG.6320 Avicennia marina HOM05D000092 ORTHO05D000042 3.5e-07 59.7 154 32.5
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 4.6e-07 59.3 198 30.8
FAN14G0094 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.6e-07 59.3 201 27.4
FvH4_6g53580 Fragaria vesca HOM05D000092 ORTHO05D000042 6.0e-07 58.9 201 27.4
Lj6C158G1 Lonicera japonica HOM05D000092 ORTHO05D000042 1.0e-06 58.2 208 27.4
Potri.005G042400 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.0e-06 58.2 277 25.3
CiPaw.08G170600 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.3e-06 57.8 227 25.6
arahy.Tifrunner.gnm1.ann1.RQU8DI Arachis hypogaea HOM05D000092 ORTHO05D000042 1.8e-06 57.4 275 25.8
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 1.8e-06 57.4 213 31.0
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 1.8e-06 57.4 213 31.0
FvH4_3g05070 Fragaria vesca HOM05D000092 ORTHO05D000042 1.8e-06 57.4 201 26.9
FAN11G0007 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.8e-06 57.4 201 27.4
Manes.02G220780 Manihot esculenta HOM05D000092 ORTHO05D000042 1.8e-06 57.4 194 28.9
CiPaw.08G170000 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.3e-06 57.0 207 27.1
Actinidia17944 Actinidia chinensis HOM05D000092 ORTHO05D000042 3.0e-06 56.6 209 28.7
CSS0022334 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.0e-06 56.6 156 30.1
Lsat_1_v5_gn_3_97800 Lactuca sativa HOM05D000092 ORTHO05D000042 3.0e-06 56.6 191 27.2
GSVIVG01021920001 Vitis vinifera HOM05D000092 ORTHO05D000042 3.0e-06 56.6 277 28.5
FAN21G2588 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.9e-06 56.2 201 27.4
Manes.07G062348 Manihot esculenta HOM05D000092 ORTHO05D000042 6.7e-06 55.5 265 26.8
CiPaw.08G174800 Carya illinoinensis HOM05D000092 ORTHO05D000042 8.7e-06 55.1 210 28.6
Peaxi162Scf00014g00177 Petunia axillaris HOM05D000092 ORTHO05D000042 8.7e-06 55.1 152 30.3


User provided reference genes

Program Settings