Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 2.4e-195 685.3 338 100.0
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.0e-164 583.6 342 87.1
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 1.3e-164 583.2 343 87.8
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.9e-148 528.9 349 78.2
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.6e-136 489.2 346 76.0
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 6.3e-127 458.0 334 68.0
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 8.3e-127 457.6 346 65.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.4e-126 456.1 287 79.4
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.2e-125 453.8 341 67.7
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 2.0e-125 453.0 262 82.4
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.7e-124 449.9 341 70.4
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 8.6e-124 447.6 310 72.9
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.5e-123 446.8 336 67.3
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.3e-123 445.3 338 67.5
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.3e-123 445.3 336 67.0
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 4.3e-123 445.3 342 65.2
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.3e-123 444.5 336 66.7
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.6e-122 443.4 338 67.2
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 3.6e-122 442.2 292 73.3
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.4e-121 440.3 323 68.7
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.8e-121 439.9 345 66.7
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 2.3e-121 439.5 337 65.3
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.3e-121 439.5 261 79.7
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 3.0e-121 439.1 261 78.9
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 4.0e-121 438.7 262 79.8
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 8.9e-121 437.6 327 66.7
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 1.5e-120 436.8 339 65.5
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 3.4e-120 435.6 339 65.5
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 4.4e-120 435.3 323 67.8
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 4.4e-120 435.3 307 70.4
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 5.7e-120 434.9 262 77.9
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 7.5e-120 434.5 259 79.9
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 9.8e-120 434.1 261 78.9
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.3e-119 433.7 261 79.3
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.3e-119 433.7 262 77.1
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 1.3e-119 433.7 318 68.9
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.9e-119 432.6 336 65.5
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 4.9e-119 431.8 262 77.5
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 6.4e-119 431.4 340 65.0
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 8.3e-119 431.0 342 66.1
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 8.3e-119 431.0 338 63.9
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.1e-118 430.6 259 79.2
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.1e-118 430.6 291 72.5
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 2.4e-118 429.5 265 77.0
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 5.4e-118 428.3 262 75.6
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 7.0e-118 427.9 259 77.6
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.2e-117 427.2 262 77.9
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 1.6e-117 426.8 347 63.4
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 2.0e-117 426.4 307 69.4
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 7.8e-117 424.5 328 65.9
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.0e-116 424.1 269 73.6
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.0e-116 424.1 263 76.8
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 3.0e-116 422.5 262 76.7
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.0e-116 422.5 262 76.7
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 5.0e-116 421.8 282 69.9
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 8.6e-116 421.0 343 62.7
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 2.5e-115 419.5 350 62.0
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 3.3e-115 419.1 273 71.1
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.6e-114 416.8 291 68.7
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.6e-114 416.8 316 66.8
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 1.6e-114 416.8 301 69.1
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.8e-114 416.0 264 76.9
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 6.2e-114 414.8 261 74.3
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 8.0e-114 414.5 342 62.9
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 8.0e-114 414.5 361 60.4
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 8.0e-114 414.5 262 75.2
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 3.1e-113 412.5 301 67.4
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 3.1e-113 412.5 300 67.7
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 6.8e-113 411.4 307 67.4
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 8.9e-113 411.0 351 61.5
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 8.9e-113 411.0 383 57.4
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.2e-112 410.6 261 73.9
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.5e-112 410.2 319 64.6
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 5.8e-112 408.3 301 66.8
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 7.5e-112 407.9 294 68.0
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 9.8e-112 407.5 277 72.2
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 1.3e-111 407.1 303 66.3
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.3e-111 407.1 294 67.7
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 2.9e-111 406.0 301 66.8
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 3.7e-111 405.6 294 67.7
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 3.7e-111 405.6 307 66.1
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 4.9e-111 405.2 291 67.0
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.9e-110 403.3 314 64.6
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.9e-110 403.3 341 62.8
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.1e-107 394.0 238 79.0
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 4.7e-106 388.7 322 60.6
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 2.3e-105 386.3 280 65.4
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 6.4e-103 378.3 257 70.0
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 3.2e-102 375.9 423 49.6
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.6e-101 373.6 267 69.7
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 5.6e-99 365.2 264 68.6
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 4.3e-91 339.0 261 63.6
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 5.8e-88 328.6 297 52.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 8.4e-87 324.7 211 75.8
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 3.2e-86 322.8 259 57.9
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 7.3e-83 311.6 242 65.3
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 7.3e-83 311.6 276 58.3
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 3.6e-82 309.3 298 55.4
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.4e-81 307.4 272 52.6
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 3.4e-80 302.8 291 55.0
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 4.2e-78 295.8 241 57.7
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 6.4e-71 271.9 159 76.7
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 1.7e-63 247.3 147 76.2
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.9e-63 245.7 147 79.6
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.8e-58 229.2 163 71.2
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.9e-54 217.2 135 78.5
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 9.3e-54 214.9 134 74.6
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 9.7e-51 204.9 267 41.9
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.8e-50 203.4 214 52.3
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.7e-42 177.6 134 61.2
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.4e-38 164.5 98 78.6
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.1e-29 134.0 272 33.5
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 3.6e-29 133.3 303 32.7
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.3e-26 124.8 278 30.2
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 9.1e-17 92.0 49 73.5
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.1e-13 80.9 99 47.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.4e-11 73.6 49 65.3


User provided reference genes

Program Settings