Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 7.1e-212 740.3 376 100.0
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 3.4e-206 721.5 377 97.3
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 3.0e-186 655.2 373 91.4
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 1.1e-175 620.2 326 96.9
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 1.2e-163 580.1 376 81.1
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 1.6e-163 579.7 381 78.7
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 5.2e-162 574.7 382 78.8
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 2.0e-161 572.8 373 79.1
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 9.8e-161 570.5 371 78.7
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 4.5e-158 561.6 373 76.9
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 1.0e-154 550.4 385 76.1
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 2.0e-153 546.2 381 75.3
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 2.6e-153 545.8 375 76.3
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 7.5e-153 544.3 387 74.2
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 2.8e-152 542.3 383 73.6
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 6.3e-152 541.2 380 75.3
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 8.3e-152 540.8 373 74.0
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 1.8e-151 539.7 376 77.4
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 2.4e-151 539.3 344 80.2
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 9.1e-151 537.3 377 73.7
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 1.2e-150 537.0 363 77.1
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 1.2e-150 537.0 379 75.5
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 2.7e-150 535.8 386 73.6
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 4.5e-150 535.0 379 74.1
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 1.7e-149 533.1 387 73.9
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 3.8e-149 531.9 378 74.1
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 5.0e-149 531.6 319 83.7
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 5.0e-149 531.6 373 75.6
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 6.6e-149 531.2 368 76.1
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 1.1e-148 530.4 371 72.5
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 1.9e-148 529.6 379 74.1
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 3.3e-148 528.9 371 75.7
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 4.2e-148 528.5 328 82.6
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 5.5e-148 528.1 372 72.6
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 9.5e-148 527.3 372 72.6
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 1.6e-147 526.6 382 73.3
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 1.6e-147 526.6 364 75.8
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 2.1e-147 526.2 384 70.8
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 2.8e-147 525.8 379 72.8
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 3.6e-147 525.4 369 74.8
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 3.6e-147 525.4 376 72.6
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 6.1e-147 524.6 383 72.6
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 8.0e-147 524.2 384 72.7
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 8.0e-147 524.2 386 73.1
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 1.4e-146 523.5 404 70.8
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 1.4e-146 523.5 372 72.6
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 2.3e-146 522.7 385 72.5
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.0e-146 522.3 370 72.7
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 4.0e-146 521.9 380 72.4
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 1.2e-145 520.4 376 72.9
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 2.0e-145 519.6 385 73.0
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 2.6e-145 519.2 367 74.1
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 2.6e-145 519.2 367 74.1
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 4.4e-145 518.5 376 73.7
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 9.8e-145 517.3 376 72.6
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 1.7e-144 516.5 376 73.9
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 1.7e-144 516.5 435 66.0
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 3.7e-144 515.4 369 74.0
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 4.9e-144 515.0 381 71.7
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 1.8e-143 513.1 365 74.2
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 4.1e-143 511.9 368 72.8
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 9.2e-143 510.8 412 68.0
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 1.0e-141 507.3 377 72.7
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 1.3e-141 506.9 365 73.2
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 5.0e-141 505.0 351 74.9
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 8.6e-141 504.2 359 74.9
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 1.1e-140 503.8 369 71.0
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 1.5e-140 503.4 381 70.6
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 2.5e-140 502.7 343 74.1
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 2.8e-139 499.2 370 73.2
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 1.0e-138 497.3 383 69.5
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 1.4e-138 496.9 362 69.9
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 2.3e-138 496.1 373 72.1
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 3.1e-138 495.7 386 69.2
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 3.4e-137 492.3 374 66.8
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 1.7e-136 490.0 367 72.8
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 4.9e-136 488.4 318 78.9
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 1.4e-135 486.9 331 75.8
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 3.2e-135 485.7 343 71.7
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 9.2e-135 484.2 378 65.6
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 6.6e-133 478.0 383 66.8
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 8.6e-133 477.6 378 65.3
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 8.6e-133 477.6 383 63.4
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 8.6e-133 477.6 284 80.3
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 1.9e-132 476.5 379 65.4
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 1.9e-132 476.5 379 65.4
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 1.9e-132 476.5 382 64.9
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 3.3e-132 475.7 378 65.1
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 7.3e-132 474.6 382 65.7
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 9.5e-132 474.2 378 65.1
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 1.2e-131 473.8 382 64.9
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 1.2e-131 473.8 382 65.2
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 2.1e-131 473.0 377 65.8
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 3.6e-131 472.2 379 64.6
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 3.6e-131 472.2 377 65.8
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 1.4e-130 470.3 284 78.9
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.8e-130 469.9 286 80.8
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 1.8e-130 469.9 380 64.7
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 1.8e-130 469.9 327 75.2
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 5.2e-130 468.4 379 64.1
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 2.6e-129 466.1 398 63.3
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 5.8e-129 464.9 321 73.5
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 5.8e-129 464.9 359 67.4
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 2.9e-128 462.6 302 75.5
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 3.7e-128 462.2 374 64.2
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 3.7e-128 462.2 322 72.4
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 1.9e-127 459.9 321 71.7
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 2.4e-127 459.5 278 80.2
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 3.2e-127 459.1 301 75.1
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 4.1e-127 458.8 277 80.1
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 1.2e-126 457.2 278 79.9
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 1.2e-126 457.2 278 79.9
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 2.7e-126 456.1 277 79.4
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 4.6e-126 455.3 277 79.8
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 4.6e-126 455.3 277 79.8
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 4.6e-126 455.3 277 79.8
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 4.6e-126 455.3 277 79.8
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 6.0e-126 454.9 390 61.5
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 6.0e-126 454.9 376 67.0
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 1.0e-125 454.1 366 67.5
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 1.7e-125 453.4 275 79.6
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 4.9e-120 435.3 418 56.5
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 1.1e-119 434.1 332 71.1
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 8.9e-114 414.5 319 70.5
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 2.6e-113 412.9 266 77.1
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 7.8e-110 401.4 323 63.8
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 7.3e-108 394.8 269 76.2
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 4.4e-105 385.6 277 75.8
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 7.9e-102 374.8 301 68.4
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 8.7e-101 371.3 330 62.7
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 1.4e-95 354.0 190 93.7
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 5.6e-92 342.0 272 67.3
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.4e-90 337.4 272 66.5
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 1.5e-89 334.0 352 48.6
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 4.5e-89 332.4 278 65.8
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.2e-86 324.3 340 51.2
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.2e-86 324.3 273 58.2
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 1.6e-86 323.9 256 68.4
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 4.2e-71 272.7 255 50.2
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 1.6e-70 270.8 210 67.1
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 1.6e-62 244.2 178 69.7
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 1.6e-62 244.2 162 79.6
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 2.7e-62 243.4 178 69.1
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 2.0e-60 237.3 178 68.0
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 2.8e-59 233.4 134 84.3
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 1.4e-42 177.9 101 83.2
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 5.4e-42 176.0 102 82.4
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 7.0e-42 175.6 115 74.8
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 2.5e-39 167.2 157 54.1
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 1.8e-34 151.0 131 61.1
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 1.5e-31 141.4 76 86.8
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 4.3e-31 139.8 76 85.5
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 9.5e-31 138.7 79 84.8
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.2e-28 131.7 103 68.0
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 4.1e-26 123.2 106 54.7
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 4.1e-26 123.2 114 46.5
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 7.0e-26 122.5 62 87.1
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 8.6e-24 115.5 88 63.6
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 1.9e-23 114.4 72 75.0
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 2.3e-21 107.5 69 78.3
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 2.9e-19 100.5 57 84.2
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 1.1e-18 98.6 141 42.6
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 9.2e-18 95.5 57 82.5
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 2.0e-17 94.4 55 81.8
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 1.7e-16 91.3 55 83.6
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 8.6e-16 89.0 53 77.4
A01p32880 Brassica napus HOM05D004120 ORTHO05D023811 1.6e-06 58.2 28 92.9
A06p35780 Brassica napus HOM05D004120 ORTHO05D023811 1.6e-06 58.2 28 92.9
BraA01t03409Z Brassica rapa HOM05D004120 ORTHO05D023811 1.6e-06 58.2 28 92.9
Aa31sc185G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 3.6e-06 57.0 41 63.4


User provided reference genes

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