Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.2e-115 419.9 205 100.0
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.2e-115 419.9 205 100.0
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 1.3e-106 389.8 198 95.5
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 1.7e-106 389.4 202 92.6
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 1.9e-94 349.4 199 84.9
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 4.0e-84 315.1 200 77.0
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 1.5e-83 313.2 205 77.6
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 5.8e-83 311.2 192 78.6
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 1.3e-66 256.9 193 66.3
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 1.0e-63 247.3 185 65.9
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 3.3e-62 242.3 194 61.9
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 1.8e-60 236.5 189 60.8
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 3.1e-60 235.7 194 59.8
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 3.1e-60 235.7 195 59.5
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 3.1e-60 235.7 191 60.2
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 4.1e-60 235.3 196 60.2
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 4.1e-60 235.3 206 61.7
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 9.0e-60 234.2 202 55.9
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 2.0e-59 233.0 189 60.8
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 5.9e-59 231.5 193 60.1
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 1.0e-58 230.7 190 58.4
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 1.7e-58 229.9 190 58.4
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 3.8e-58 228.8 191 57.1
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 6.5e-58 228.0 189 57.1
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.1e-57 227.3 187 56.7
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 1.9e-57 226.5 191 58.6
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 4.2e-57 225.3 189 57.1
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 5.5e-57 224.9 189 56.6
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 7.2e-57 224.6 203 56.2
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 7.2e-57 224.6 189 56.6
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 1.2e-56 223.8 193 56.5
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 1.6e-56 223.4 187 61.5
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 1.6e-56 223.4 206 55.3
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 3.6e-56 222.2 189 58.7
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 3.6e-56 222.2 190 60.0
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 3.6e-56 222.2 197 57.9
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 4.6e-56 221.9 187 59.4
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 2.3e-55 219.5 189 58.7
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.3e-55 219.5 189 56.1
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 1.1e-54 217.2 182 54.9
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 1.5e-54 216.9 184 58.2
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 1.5e-54 216.9 181 59.1
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 1.5e-54 216.9 186 54.8
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.5e-54 216.9 194 57.7
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 2.5e-54 216.1 186 58.6
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 3.3e-54 215.7 192 58.9
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 3.3e-54 215.7 187 59.9
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 9.7e-54 214.2 184 58.2
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.3e-53 213.8 172 58.7
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 2.2e-53 213.0 189 56.1
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 3.7e-53 212.2 194 56.7
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 6.3e-53 211.5 186 57.5
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 6.3e-53 211.5 164 64.6
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 1.4e-52 210.3 184 56.0
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 1.8e-52 209.9 182 60.4
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 3.1e-52 209.1 190 54.7
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 4.1e-52 208.8 201 56.2
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.2e-51 207.2 189 52.9
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 1.2e-51 207.2 193 54.4
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 2.0e-51 206.5 187 52.4
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 3.4e-51 205.7 184 56.5
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 4.5e-51 205.3 194 53.6
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 4.5e-51 205.3 208 51.4
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 5.9e-51 204.9 175 58.9
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 1.0e-50 204.1 189 52.9
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 5.0e-50 201.8 188 54.3
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.1e-49 200.7 196 54.6
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 1.4e-49 200.3 187 52.4
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 1.9e-49 199.9 181 54.1
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 1.2e-48 197.2 198 47.5
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 2.1e-48 196.4 183 57.4
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 5.5e-41 171.8 194 48.5
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 2.1e-40 169.9 181 46.4
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 1.0e-39 167.5 183 47.5
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 2.5e-33 146.4 186 45.2
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.2e-33 145.6 171 48.5
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 2.7e-32 142.9 198 39.9
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 2.3e-31 139.8 260 32.3
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 4.0e-31 139.0 263 31.2
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.3e-29 131.7 194 38.7
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 3.1e-28 129.4 215 37.2
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.1e-28 129.0 181 42.0
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.5e-27 125.9 123 50.4
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 1.5e-25 120.6 198 33.8
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 1.6e-24 117.1 86 64.0
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.6e-24 117.1 168 41.7
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.2e-23 112.1 204 36.8
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 5.2e-23 112.1 200 34.5
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 8.3e-21 104.8 205 34.1
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.4e-20 103.2 183 35.5
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 9.1e-20 101.3 188 34.0
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 2.7e-19 99.8 170 32.9
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-18 97.1 121 46.3
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 6.5e-18 95.1 90 56.7
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.6e-16 90.5 173 34.1
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 2.0e-14 83.6 86 47.7
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 1.2e-11 74.3 114 38.6
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 1.2e-11 74.3 112 35.7
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 5.9e-11 72.0 126 32.5
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 1.0e-10 71.2 118 35.6
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.8e-10 69.3 98 39.8
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.6e-08 63.9 170 27.6
COL.COLO4_13576 Corchorus olitorius HOM05D007512 ORTHO05D020513 2.3e-07 60.1 113 34.5
PGSC0003DMG400003669 Solanum tuberosum HOM05D007512 ORTHO05D009524 8.9e-07 58.2 45 66.7
Potri.001G044601 Populus trichocarpa HOM05D007512 ORTHO05D009524 3.4e-06 56.2 51 49.0


User provided reference genes

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