Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 7.5e-127 457.2 233 100.0
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 7.5e-127 457.2 233 100.0
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 1.9e-122 442.6 233 97.0
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 4.2e-122 441.4 233 96.6
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.4e-117 426.4 233 92.3
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.4e-117 426.4 233 92.3
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 8.5e-115 417.2 233 90.1
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 1.2e-95 353.6 231 76.2
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.2e-95 353.6 227 75.3
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 2.0e-95 352.8 225 76.0
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 7.5e-95 350.9 227 76.2
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 2.9e-94 349.0 227 76.2
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 2.4e-93 345.9 227 74.4
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 3.2e-93 345.5 227 74.9
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 4.1e-93 345.1 226 74.8
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 7.0e-93 344.4 225 74.7
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 7.0e-93 344.4 229 75.1
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 3.5e-92 342.0 226 73.5
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 4.6e-92 341.7 227 73.6
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 7.8e-92 340.9 227 74.0
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 1.0e-91 340.5 227 73.1
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 3.9e-91 338.6 227 74.4
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 5.0e-91 338.2 229 72.1
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 5.0e-91 338.2 227 71.4
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 6.6e-91 337.8 226 73.9
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 1.9e-90 336.3 227 73.6
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 7.3e-90 334.3 228 73.2
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 9.5e-90 334.0 227 70.9
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 9.5e-90 334.0 226 71.7
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.2e-89 333.6 228 72.8
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 1.2e-89 333.6 228 72.8
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 1.2e-89 333.6 227 71.4
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 3.6e-89 332.0 226 73.0
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 6.2e-89 331.3 227 73.1
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 6.2e-89 331.3 227 73.1
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 8.1e-89 330.9 227 71.4
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 1.4e-88 330.1 226 69.5
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 4.0e-88 328.6 225 71.6
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 5.2e-88 328.2 227 69.2
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 1.5e-87 326.6 226 70.4
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 1.5e-87 326.6 226 70.4
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 2.6e-87 325.9 226 68.1
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 4.4e-87 325.1 231 68.8
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 4.4e-87 325.1 231 68.8
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 4.4e-87 325.1 231 68.8
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 4.4e-87 325.1 231 68.8
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 4.4e-87 325.1 231 68.8
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 4.4e-87 325.1 227 70.9
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 7.5e-87 324.3 218 74.3
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 1.3e-86 323.6 226 69.0
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 1.7e-86 323.2 231 68.4
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 1.7e-86 323.2 226 69.5
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 2.9e-86 322.4 229 68.6
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 3.7e-86 322.0 231 68.0
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 4.9e-86 321.6 227 70.5
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 8.3e-86 320.9 229 66.8
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 8.3e-86 320.9 226 69.5
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.1e-85 320.5 229 66.8
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 1.4e-85 320.1 226 67.7
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 3.2e-85 318.9 232 68.1
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 3.2e-85 318.9 227 70.0
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 3.2e-85 318.9 232 68.1
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 4.1e-85 318.5 229 66.4
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 5.4e-85 318.2 232 68.1
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 5.4e-85 318.2 226 69.9
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 3.5e-84 315.5 232 67.2
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 3.5e-84 315.5 232 67.2
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 4.6e-84 315.1 231 67.1
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 7.8e-84 314.3 232 66.8
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.0e-83 313.9 231 67.5
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 2.3e-83 312.8 231 67.5
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 2.3e-83 312.8 228 69.3
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 3.0e-83 312.4 248 63.7
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 3.0e-83 312.4 227 67.8
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 3.9e-83 312.0 231 67.1
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 3.9e-83 312.0 227 68.3
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 5.1e-83 311.6 228 68.9
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 6.6e-83 311.2 227 66.1
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 1.5e-82 310.1 232 66.4
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 2.5e-82 309.3 231 66.7
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 3.3e-82 308.9 227 67.4
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.3e-82 308.9 237 63.7
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 3.3e-82 308.9 227 65.2
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 3.3e-82 308.9 227 64.8
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 4.3e-82 308.5 227 65.2
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 2.8e-81 305.8 227 67.0
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.1e-80 303.9 263 58.2
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 1.8e-80 303.1 227 65.2
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 1.8e-80 303.1 227 66.5
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 3.1e-80 302.4 262 59.5
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 4.0e-80 302.0 231 66.2
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 5.2e-80 301.6 220 66.8
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 8.9e-80 300.8 227 65.6
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 1.2e-79 300.4 227 65.2
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 1.3e-78 297.0 227 64.3
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.0e-75 287.3 231 61.9
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 5.6e-74 281.6 230 63.9
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 9.9e-71 270.8 226 61.1
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 4.3e-66 255.4 181 67.4
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 5.8e-63 245.0 239 53.6
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 2.7e-60 236.1 228 56.6
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 9.6e-58 227.6 229 54.6
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 1.3e-54 217.2 126 81.0
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 4.8e-49 198.7 135 77.8
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 1.8e-48 196.8 191 50.8
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 2.6e-47 193.0 189 49.7
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 5.8e-47 191.8 203 52.2
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 9.3e-45 184.5 123 70.7
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.6e-44 183.7 213 43.2
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 3.5e-44 182.6 136 61.8
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 2.8e-41 172.9 143 60.1
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 7.6e-39 164.9 190 42.6
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.4e-37 160.6 133 58.6
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 1.5e-34 150.6 91 82.4
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 3.3e-34 149.4 86 77.9
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 2.2e-33 146.7 183 42.6
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 6.9e-24 115.2 91 61.5
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 1.4e-21 107.5 88 60.2
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 2.6e-18 96.7 60 75.0
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 8.2e-17 91.7 85 54.1
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 2.2e-14 83.6 190 30.0
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 8.0e-12 75.1 51 64.7
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 5.3e-08 62.4 34 85.3
MCO09G217 Micromonas commoda HOM05D006484 ORTHO05D008002 5.0e-06 55.8 174 25.9


User provided reference genes

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