Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401030641 Solanum tuberosum HOM05D000274 ORTHO05D007831 8.9e-40 166.4 79 100.0
PGSC0003DMG402030641 Solanum tuberosum HOM05D000274 ORTHO05D007831 8.9e-40 166.4 79 100.0
Sopen02g035900 Solanum pennellii HOM05D000274 ORTHO05D007831 1.3e-38 162.5 79 96.2
Solyc02g091280.3 Solanum lycopersicum HOM05D000274 ORTHO05D007831 3.7e-38 161.0 79 94.9
CAN.G625.76 Capsicum annuum HOM05D000274 ORTHO05D007831 9.6e-26 119.8 79 75.9
Nitab4.5_0002456g0170 Nicotiana tabacum HOM05D000274 ORTHO05D007831 5.2e-24 114.0 86 66.3
Dinv19001 Davidia involucrata HOM05D000274 ORTHO05D007831 5.8e-23 110.5 88 61.4
Sabra04G0061900 Salix brachista HOM05D000274 ORTHO05D007831 9.9e-23 109.8 86 62.8
DCAR_025884 Daucus carota HOM05D000274 ORTHO05D007831 2.2e-22 108.6 87 64.4
TWI74G0782 Tripterygium wilfordii HOM05D000274 ORTHO05D007831 4.9e-22 107.5 88 60.2
Oeu041975.1 Olea europaea HOM05D000274 ORTHO05D007831 8.4e-22 106.7 88 60.2
Peaxi162Scf00803g00423 Petunia axillaris HOM05D000274 ORTHO05D007831 8.4e-22 106.7 87 59.8
unitig_88.g27801 Utricularia gibba HOM05D000274 ORTHO05D007831 1.1e-21 106.3 62 77.4
Potri.004G092100 Populus trichocarpa HOM05D000274 ORTHO05D007831 1.4e-21 105.9 63 74.6
Actinidia36359 Actinidia chinensis HOM05D000274 ORTHO05D007831 2.4e-21 105.1 63 73.0
Sc10g0000930 Simmondsia chinensis HOM05D000274 ORTHO05D007831 2.4e-21 105.1 88 59.1
Gohir.A07G076200 Gossypium hirsutum HOM05D000274 ORTHO05D007831 3.2e-21 104.8 79 63.3
Gohir.D07G080700 Gossypium hirsutum HOM05D000274 ORTHO05D007831 3.2e-21 104.8 79 63.3
Gorai.001G085800 Gossypium raimondii HOM05D000274 ORTHO05D007831 3.2e-21 104.8 79 63.3
Hma1.2p1_0283F.1_g113610 Hydrangea macrophylla HOM05D000274 ORTHO05D007831 3.2e-21 104.8 88 59.1
Oeu030806.2 Olea europaea HOM05D000274 ORTHO05D007831 3.2e-21 104.8 88 59.1
CSS0039425 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D007831 5.4e-21 104.0 88 56.8
Eucgr.J01541 Eucalyptus grandis HOM05D000274 ORTHO05D007831 5.4e-21 104.0 88 55.7
MSTRG.23609 Avicennia marina HOM05D000274 ORTHO05D007831 7.1e-21 103.6 73 68.5
Cfa007861 Carpinus fangiana HOM05D004323 ORTHO05D007831 1.2e-20 102.8 88 58.0
Migut.L00478 Erythranthe guttata HOM05D000274 ORTHO05D007831 1.2e-20 102.8 80 60.0
Nitab4.5_0003598g0090 Nicotiana tabacum HOM05D000274 ORTHO05D007831 1.6e-20 102.4 63 74.6
Cc07_g08270 Coffea canephora HOM05D000274 ORTHO05D007831 2.1e-20 102.1 82 59.8
MBI16_g32950_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D007831 2.1e-20 102.1 88 56.8
CANSAT56G2315 Cannabis sativa HOM05D000274 ORTHO05D007831 2.7e-20 101.7 73 61.6
PGR004G2815 Punica granatum HOM05D000274 ORTHO05D007831 7.8e-20 100.1 80 61.2
Cpa.g.sc116.12 Carica papaya HOM05D000274 ORTHO05D007831 1.0e-19 99.8 73 63.0
ClCG05G010770 Citrullus lanatus HOM05D000274 ORTHO05D007831 1.0e-19 99.8 73 61.6
COL.COLO4_27121 Corchorus olitorius HOM05D000274 ORTHO05D007831 1.0e-19 99.8 85 58.8
Glyma.18G291900 Glycine max HOM05D000274 ORTHO05D007831 1.3e-19 99.4 72 62.5
TAR622G0238 Trochodendron aralioides HOM05D000274 ORTHO05D007831 1.3e-19 99.4 88 55.7
Haze_14209 Corylus avellana HOM05D004323 ORTHO05D007831 1.7e-19 99.0 86 55.8
MELO3C020312.2 Cucumis melo HOM05D000274 ORTHO05D007831 1.7e-19 99.0 73 60.3
HanXRQChr09g0262361 Helianthus annuus HOM05D000274 ORTHO05D007831 1.7e-19 99.0 75 61.3
CARHR058720 Cardamine hirsuta HOM05D000274 ORTHO05D007831 2.3e-19 98.6 69 63.8
Manes.02G074000 Manihot esculenta HOM05D000274 ORTHO05D007831 2.3e-19 98.6 73 61.6
Glyma.02G091200 Glycine max HOM05D000274 ORTHO05D007831 3.0e-19 98.2 69 63.8
CDE10G1253 Ceratophyllum demersum HOM05D000274 ORTHO05D007831 3.9e-19 97.8 80 58.8
ECA232G0344 Erigeron canadensis HOM05D000274 ORTHO05D007831 3.9e-19 97.8 81 59.3
Thhalv10018911m.g Eutrema salsugineum HOM05D000274 ORTHO05D007831 3.9e-19 97.8 69 66.7
Actinidia15919 Actinidia chinensis HOM05D000274 ORTHO05D007831 5.1e-19 97.4 63 69.8
AL2G24630 Arabidopsis lyrata HOM05D000274 ORTHO05D007831 5.1e-19 97.4 63 68.3
AT1G66670 Arabidopsis thaliana HOM05D000274 ORTHO05D007831 5.1e-19 97.4 63 68.3
arahy.Tifrunner.gnm1.ann1.CE4L5A Arachis hypogaea HOM05D000274 ORTHO05D007831 6.6e-19 97.1 83 55.4
CiPaw.03G067500 Carya illinoinensis HOM05D000274 ORTHO05D007831 6.6e-19 97.1 87 54.0
VMungo1383G2054 Vigna mungo HOM05D000274 ORTHO05D007831 6.6e-19 97.1 69 62.3
Sp5g21610 Schrenkiella parvula HOM05D000274 ORTHO05D007831 8.7e-19 96.7 69 62.3
CDE10G1171 Ceratophyllum demersum HOM05D000274 ORTHO05D007831 1.1e-18 96.3 79 58.2
arahy.Tifrunner.gnm1.ann1.BD9PAW Arachis hypogaea HOM05D000274 ORTHO05D007831 1.5e-18 95.9 83 54.2
Lalb_Chr10g0091591 Lupinus albus HOM05D000274 ORTHO05D007831 1.5e-18 95.9 69 58.0
AUR62023207 Chenopodium quinoa HOM05D000274 ORTHO05D007831 1.9e-18 95.5 74 62.2
AUR62023253 Chenopodium quinoa HOM05D000274 ORTHO05D007831 1.9e-18 95.5 74 62.2
Lsat_1_v5_gn_4_155160 Lactuca sativa HOM05D000274 ORTHO05D007831 1.9e-18 95.5 74 63.5
RcHm_v2.0_Chr1g0327981 Rosa chinensis HOM05D000274 ORTHO05D007831 1.9e-18 95.5 72 58.3
SalBow3G4436 Salvia bowleyana HOM05D000274 ORTHO05D007831 1.9e-18 95.5 63 68.3
HPP92_024414 Vanilla planifolia HOM05D000274 ORTHO05D007831 1.9e-18 95.5 87 57.5
Carub.0002s1287 Capsella rubella HOM05D000274 ORTHO05D007831 2.5e-18 95.1 69 63.8
CsaV3_3G021700 Cucumis sativus L. HOM05D000274 ORTHO05D007831 2.5e-18 95.1 89 50.6
MD02G1275200 Malus domestica HOM05D000274 ORTHO05D007831 2.5e-18 95.1 72 56.9
Prupe.2G045800 Prunus persica HOM05D000274 ORTHO05D007831 3.3e-18 94.7 72 58.3
FAN01G1026 Fragaria x ananassa HOM05D000274 ORTHO05D007831 4.3e-18 94.4 59 67.8
QL02p048549 Quercus lobata HOM05D000274 ORTHO05D007831 4.3e-18 94.4 72 61.1
FvH4_7g04110 Fragaria vesca HOM05D000274 ORTHO05D007831 5.6e-18 94.0 59 67.8
FAN03G2000 Fragaria x ananassa HOM05D000274 ORTHO05D007831 5.6e-18 94.0 59 67.8
FAN06G3687 Fragaria x ananassa HOM05D000274 ORTHO05D007831 5.6e-18 94.0 59 67.8
Ah.16g101390 Amaranthus hybridus HOM05D000274 ORTHO05D007831 7.3e-18 93.6 63 63.5
THA.LOC104805596 Tarenaya hassleriana HOM05D000274 ORTHO05D007831 7.3e-18 93.6 63 65.1
PSO063G5550 Papaver somniferum HOM05D000274 ORTHO05D007831 9.6e-18 93.2 60 66.7
PSO782G4478 Papaver somniferum HOM05D000274 ORTHO05D007831 9.6e-18 93.2 60 66.7
Sed0007094 Sechium edule HOM05D000274 ORTHO05D007831 9.6e-18 93.2 73 60.3
EL10Ac2g04500 Beta vulgaris HOM05D000274 ORTHO05D007831 1.3e-17 92.8 73 56.2
Aa31LG2G3170 Aethionema arabicum HOM05D000274 ORTHO05D007831 2.1e-17 92.0 57 70.2
BcaB03g15255 Brassica carinata HOM05D000274 ORTHO05D007831 2.8e-17 91.7 63 63.5
Sed0023154 Sechium edule HOM05D000274 ORTHO05D007831 2.8e-17 91.7 73 58.9
Thecc.04G123500 Theobroma cacao HOM05D000274 ORTHO05D007831 2.8e-17 91.7 72 56.9
Ciclev10012172m.g Citrus clementina HOM05D000274 ORTHO05D007831 3.6e-17 91.3 84 53.6
Phvul.008G010000 Phaseolus vulgaris HOM05D000274 ORTHO05D007831 3.6e-17 91.3 69 59.4
BraA07t30977Z Brassica rapa HOM05D000274 ORTHO05D007831 6.2e-17 90.5 63 65.1
Lj1g0005631 Lotus japonicus HOM05D000274 ORTHO05D007831 6.2e-17 90.5 73 54.8
MD07G1043100 Malus domestica HOM05D000274 ORTHO05D007831 1.1e-16 89.7 72 51.4
Ah.10g037890 Amaranthus hybridus HOM05D000534 ORTHO05D000389 1.4e-16 89.4 62 61.3
BcaC08g46104 Brassica carinata HOM05D000274 ORTHO05D007831 1.8e-16 89.0 63 63.5
C06p39920 Brassica napus HOM05D000274 ORTHO05D007831 1.8e-16 89.0 63 63.5
BolC6t39080H Brassica oleracea HOM05D000274 ORTHO05D007831 1.8e-16 89.0 63 63.5
ATR0326G029 Amborella trichopoda HOM05D000274 ORTHO05D007831 9.0e-16 86.7 77 54.5
Os01g0507900 Oryza sativa ssp. japonica HOM05D000274 ORTHO05D007831 1.2e-15 86.3 73 56.2
Actinidia04707 Actinidia chinensis HOM05D000274 ORTHO05D007831 1.5e-15 85.9 58 65.5
Aqoxy3G03964 Aquilegia oxysepala HOM05D000274 ORTHO05D007831 2.0e-15 85.5 86 51.2
Medtr7g082980 Medicago truncatula HOM05D000274 ORTHO05D007831 2.0e-15 85.5 58 69.0
SGA_v2.0_scaffold221G42710 Striga asiatica HOM05D000274 ORTHO05D007831 3.4e-15 84.7 63 63.5
Ca_08104_v3 Cicer arietinum L. HOM05D000274 ORTHO05D007831 4.5e-15 84.3 63 63.5
Duzib138G1129 Durio zibethinus HOM05D000274 ORTHO05D007831 9.9e-15 83.2 72 55.6
Psat3g096320 Pisum sativum HOM05D000274 ORTHO05D007831 9.9e-15 83.2 58 67.2
Sed0012669 Sechium edule HOM05D000274 ORTHO05D007831 1.7e-14 82.4 69 58.0
Hund13691 Selenicereus undatus HOM05D000274 ORTHO05D007831 3.8e-14 81.3 85 49.4
Lj2C436G8 Lonicera japonica HOM05D000274 ORTHO05D007831 1.9e-13 79.0 74 55.4
FAN10G1368 Fragaria x ananassa HOM05D000504 ORTHO05D000403 3.2e-13 78.2 45 71.1
Zm00001eb341860 Zea mays HOM05D000274 ORTHO05D007831 3.2e-13 78.2 76 51.3
vmacro05496 Vaccinium macrocarpon HOM05D000274 ORTHO05D007831 5.4e-13 77.4 87 49.4
AagrBONN_evm.TU.Sc2ySwM_228.3068 Anthoceros agrestis HOM05D000274 ORTHO05D007831 1.2e-12 76.3 52 67.3
Psat6g153360 Pisum sativum HOM05D000274 ORTHO05D007831 1.6e-12 75.9 49 67.3
Mapoly0006s0256 Marchantia polymorpha HOM05D000274 ORTHO05D007831 2.7e-12 75.1 58 62.1
Psat0s4110g0080 Pisum sativum HOM05D000274 ORTHO05D007831 6.0e-12 73.9 49 65.3
Rhsim10G0078600 Rhododendron simsii HOM05D002272 ORTHO05D005405 3.0e-11 71.6 66 51.5
TPR.G28538 Trifolium pratense HOM05D000274 ORTHO05D007831 1.9e-10 68.9 60 60.0
SMO367G0847 Selaginella moellendorffii HOM05D000274 ORTHO05D007831 4.3e-10 67.8 58 60.3
Dinv03430 Davidia involucrata HOM05D000274 ORTHO05D007831 5.6e-10 67.4 33 87.9
Nn4g24096 Nelumbo nucifera HOM05D000274 ORTHO05D007831 2.8e-09 65.1 52 57.7
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 4.0e-08 61.2 69 47.8
Pp3c14_13060 Physcomitrium patens HOM05D000274 ORTHO05D007831 1.5e-07 59.3 58 50.0
Pp3c14_13063 Physcomitrium patens HOM05D000274 ORTHO05D007831 1.5e-07 59.3 58 50.0
CBR_g45495 Chara braunii HOM05D000274 ORTHO05D007831 3.4e-07 58.2 60 53.3
Pp3c17_16820 Physcomitrium patens HOM05D000274 ORTHO05D007831 4.5e-07 57.8 58 50.0
AUR62037553 Chenopodium quinoa HOM05D004141 ORTHO05D005416 2.2e-06 55.5 66 48.5
AagrBONN_evm.TU.Sc2ySwM_368.2593 Anthoceros agrestis HOM05D000274 ORTHO05D007831 4.9e-06 54.3 32 75.0


User provided reference genes

Program Settings