Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401029918 Solanum tuberosum HOM05D002201 ORTHO05D024927 8.8e-102 373.6 190 100.0
Peaxi162Scf00444g00531 Petunia axillaris HOM05D002201 ORTHO05D005125 8.4e-36 154.5 194 49.0
Solyc03g025530.3 Solanum lycopersicum HOM05D002201 ORTHO05D005125 9.6e-32 141.0 172 51.2
Nitab4.5_0004439g0130 Nicotiana tabacum HOM05D002201 ORTHO05D005125 1.6e-31 140.2 196 48.5
Sopen03g004370 Solanum pennellii HOM05D002201 ORTHO05D005125 2.8e-31 139.4 172 50.6
PGSC0003DMG400015786 Solanum tuberosum HOM05D002201 ORTHO05D005125 3.7e-31 139.0 171 52.0
Nitab4.5_0000084g0040 Nicotiana tabacum HOM05D002201 ORTHO05D005125 6.3e-31 138.3 194 49.5
CAN.G1175.4 Capsicum annuum HOM05D002201 ORTHO05D005125 1.1e-30 137.5 195 48.2
Hma1.2p1_1604F.1_g293300 Hydrangea macrophylla HOM05D002201 ORTHO05D005125 2.8e-23 112.8 192 43.2
Actinidia34127 Actinidia chinensis HOM05D002201 ORTHO05D005125 4.8e-23 112.1 158 47.5
Actinidia25884 Actinidia chinensis HOM05D002201 ORTHO05D005125 1.8e-22 110.2 187 41.7
Oeu056271.1 Olea europaea HOM05D002201 ORTHO05D005125 1.8e-22 110.2 171 39.8
Dinv35222 Davidia involucrata HOM05D002201 ORTHO05D005125 2.2e-20 103.2 181 42.0
Rhsim03G0187400 Rhododendron simsii HOM05D002201 ORTHO05D005125 2.9e-20 102.8 177 41.8
MSTRG.84 Avicennia marina HOM05D002201 ORTHO05D005125 5.0e-20 102.1 176 39.2
Lj1C1000G13 Lonicera japonica HOM05D002043 ORTHO05D002207 3.2e-19 99.4 197 42.6
Cc02_g02780 Coffea canephora HOM05D002201 ORTHO05D005125 5.5e-19 98.6 187 41.2
MD07G1273100 Malus domestica HOM05D002201 ORTHO05D005125 5.5e-19 98.6 203 37.4
Manes.06G149200 Manihot esculenta HOM05D002201 ORTHO05D005125 9.4e-19 97.8 166 41.6
MD01G1204600 Malus domestica HOM05D002201 ORTHO05D005125 2.1e-18 96.7 161 42.2
Atru.chr1.429 Acer truncatum HOM05D002201 ORTHO05D005125 6.1e-18 95.1 180 41.7
Sabra15G0155000 Salix brachista HOM05D002201 ORTHO05D005125 7.9e-18 94.7 157 39.5
Migut.F01109 Erythranthe guttata HOM05D002201 ORTHO05D005125 1.8e-17 93.6 192 38.5
CSS0012637 Camellia sinensis var. sinensis HOM05D002201 ORTHO05D005125 3.0e-17 92.8 157 42.7
Medtr6g053740 Medicago truncatula HOM05D002201 ORTHO05D005125 3.9e-17 92.4 150 39.3
SGA_v2.0_scaffold10G05327 Striga asiatica HOM05D002201 ORTHO05D005125 5.1e-17 92.0 181 37.6
Potri.015G145700 Populus trichocarpa HOM05D002201 ORTHO05D005125 6.7e-17 91.7 195 33.8
CiPaw.03G108200 Carya illinoinensis HOM05D002201 ORTHO05D005125 8.8e-17 91.3 169 37.3
Sabra12G0107200 Salix brachista HOM05D002201 ORTHO05D005125 8.8e-17 91.3 176 36.9
Potri.012G142500 Populus trichocarpa HOM05D002201 ORTHO05D005125 1.1e-16 90.9 176 35.2
TAR374G1182 Trochodendron aralioides HOM05D002201 ORTHO05D005125 1.5e-16 90.5 160 43.8
Haze_13668 Corylus avellana HOM05D002201 ORTHO05D005125 4.3e-16 89.0 199 35.7
Thecc.03G179200 Theobroma cacao HOM05D002201 ORTHO05D005125 7.4e-16 88.2 194 36.6
COL.COLO4_28054 Corchorus olitorius HOM05D002201 ORTHO05D005125 1.7e-15 87.0 189 39.2
Nn6g33438 Nelumbo nucifera HOM05D002201 ORTHO05D005125 1.7e-15 87.0 163 36.8
Solyc06g036020.1 Solanum lycopersicum HOM05D002201 ORTHO05D024927 1.7e-15 87.0 67 70.1
Duzib084G1073 Durio zibethinus HOM05D002201 ORTHO05D005125 2.8e-15 86.3 201 34.8
Ca_14551_v3 Cicer arietinum L. HOM05D002201 ORTHO05D005125 6.3e-15 85.1 190 34.7
GSVIVG01028918001 Vitis vinifera HOM05D002201 ORTHO05D005125 6.3e-15 85.1 152 37.5
arahy.Tifrunner.gnm1.ann1.JSJF91 Arachis hypogaea HOM05D002201 ORTHO05D005125 1.1e-14 84.3 165 37.0
Gorai.006G048600 Gossypium raimondii HOM05D002201 ORTHO05D005125 1.1e-14 84.3 196 36.7
Lj2g0025410 Lotus japonicus HOM05D002201 ORTHO05D005125 1.1e-14 84.3 167 36.5
QL09p013774 Quercus lobata HOM05D002201 ORTHO05D005125 1.1e-14 84.3 175 37.1
Gohir.A09G041500 Gossypium hirsutum HOM05D002201 ORTHO05D005125 3.1e-14 82.8 164 39.0
arahy.Tifrunner.gnm1.ann1.KSNA8H Arachis hypogaea HOM05D002201 ORTHO05D005125 5.3e-14 82.0 145 39.3
Cpa.g.sc107.69 Carica papaya HOM05D002201 ORTHO05D005125 5.3e-14 82.0 174 39.7
Ciclev10004249m.g Citrus clementina HOM05D002201 ORTHO05D005125 5.3e-14 82.0 166 36.1
MELO3C031643.2 Cucumis melo HOM05D002201 ORTHO05D005125 6.9e-14 81.6 198 36.4
vmacro06662 Vaccinium macrocarpon HOM05D002201 ORTHO05D005125 6.9e-14 81.6 166 39.2
Oeu045394.1 Olea europaea HOM05D002201 ORTHO05D005125 9.1e-14 81.3 187 34.2
Glyma.16G182200 Glycine max HOM05D002201 ORTHO05D005125 2.0e-13 80.1 179 35.2
TWI14G1293 Tripterygium wilfordii HOM05D002201 ORTHO05D005125 2.6e-13 79.7 143 44.8
DCAR_020255 Daucus carota HOM05D002201 ORTHO05D005125 4.5e-13 79.0 199 35.2
TWI39G0993 Tripterygium wilfordii HOM05D002201 ORTHO05D005125 4.5e-13 79.0 205 38.0
MBI17_g33588_MAGBIO Magnolia biondii HOM05D002201 ORTHO05D005125 1.0e-12 77.8 191 32.5
Lalb_Chr03g0034681 Lupinus albus HOM05D002201 ORTHO05D005125 1.3e-12 77.4 180 34.4
RcHm_v2.0_Chr1g0377741 Rosa chinensis HOM05D002201 ORTHO05D005125 2.2e-12 76.6 154 39.0
Psat1g104560 Pisum sativum HOM05D002201 ORTHO05D005125 5.0e-12 75.5 189 30.7
CsaV3_3G017230 Cucumis sativus L. HOM05D002201 ORTHO05D005125 6.5e-12 75.1 164 37.8
Duzib205G0396 Durio zibethinus HOM05D002201 ORTHO05D005125 8.5e-12 74.7 168 36.3
Sed0001026 Sechium edule HOM05D002201 ORTHO05D005125 8.5e-12 74.7 194 35.6
Gohir.A08G099000 Gossypium hirsutum HOM05D002201 ORTHO05D005125 1.4e-11 73.9 183 32.8
Aa31LG11G3190 Aethionema arabicum HOM05D002201 ORTHO05D005125 2.5e-11 73.2 187 36.4
ClCG05G008140 Citrullus lanatus HOM05D002201 ORTHO05D005625 3.2e-11 72.8 200 34.0
Duzib068G1376 Durio zibethinus HOM05D002201 ORTHO05D005125 7.2e-11 71.6 160 35.6
Lsat_1_v5_gn_9_55340 Lactuca sativa HOM05D002201 ORTHO05D005125 7.2e-11 71.6 157 40.1
CDE09G0053 Ceratophyllum demersum HOM05D002201 ORTHO05D024927 9.4e-11 71.2 184 32.6
TPR.G8168 Trifolium pratense HOM05D002201 ORTHO05D005125 1.6e-10 70.5 95 40.0
Aqoxy7G00328 Aquilegia oxysepala HOM05D002201 ORTHO05D005125 1.0e-09 67.8 186 31.7
Ah.13g068890 Amaranthus hybridus HOM05D002201 ORTHO05D005125 1.8e-09 67.0 188 31.4
Sp2g23390 Schrenkiella parvula HOM05D002201 ORTHO05D005125 3.9e-09 65.9 181 36.5
unitig_26.g10198 Utricularia gibba HOM05D002201 ORTHO05D005125 8.8e-09 64.7 188 28.2
FAN06G4866 Fragaria x ananassa HOM05D002201 ORTHO05D005125 1.5e-08 63.9 186 34.4
Sc13g0008830 Simmondsia chinensis HOM05D002201 ORTHO05D005125 1.5e-08 63.9 172 32.6
TAR375G1076 Trochodendron aralioides HOM05D002201 ORTHO05D024927 1.5e-08 63.9 127 43.3
FvH4_7g29760 Fragaria vesca HOM05D002201 ORTHO05D005125 3.3e-08 62.8 186 34.4
FAN06G3811 Fragaria x ananassa HOM05D002201 ORTHO05D005125 3.3e-08 62.8 186 34.4
PSO478G5157 Papaver somniferum HOM05D002201 ORTHO05D005125 3.3e-08 62.8 171 32.2
THA.LOC104821392 Tarenaya hassleriana HOM05D002201 ORTHO05D005125 1.7e-07 60.5 171 33.9
BolC7t44907H Brassica oleracea HOM05D002201 ORTHO05D005125 6.3e-07 58.5 169 31.4
CARHR189670 Cardamine hirsuta HOM05D002201 ORTHO05D005125 8.2e-07 58.2 177 29.9
Eucgr.A02775 Eucalyptus grandis HOM05D002201 ORTHO05D005125 1.8e-06 57.0 175 33.1
ATR0680G150 Amborella trichopoda HOM05D002201 ORTHO05D005125 2.4e-06 56.6 159 35.2
C07p43780 Brassica napus HOM05D002201 ORTHO05D005125 3.1e-06 56.2 177 32.2
PSO782G3058 Papaver somniferum HOM05D002201 ORTHO05D005125 4.1e-06 55.8 175 30.9
FAN10G2483 Fragaria x ananassa HOM05D002201 ORTHO05D005125 5.3e-06 55.5 167 33.5
HPP92_005035 Vanilla planifolia HOM05D002201 ORTHO05D005125 5.3e-06 55.5 165 33.9
EL10Ac3g05610 Beta vulgaris HOM05D002201 ORTHO05D005125 7.0e-06 55.1 199 31.2
BcaNung05471 Brassica carinata HOM05D002201 ORTHO05D005125 7.0e-06 55.1 188 31.4
FAN01G1718 Fragaria x ananassa HOM05D002201 ORTHO05D005125 7.0e-06 55.1 159 35.2
FAN10G3902 Fragaria x ananassa HOM05D002201 ORTHO05D005125 9.1e-06 54.7 161 32.9
PGR042G1981 Punica granatum HOM05D002201 ORTHO05D005125 9.1e-06 54.7 193 30.1


User provided reference genes

Program Settings