Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 3.9e-60 234.6 116 100.0
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 5.5e-46 187.6 121 81.0
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 1.0e-44 183.3 115 81.7
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 6.1e-37 157.5 118 74.6
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.9e-36 154.8 118 74.6
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 4.8e-26 121.3 100 64.0
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 9.1e-25 117.1 99 61.6
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 9.1e-25 117.1 119 58.8
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 2.6e-24 115.5 114 59.6
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 3.5e-24 115.2 119 56.3
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 1.3e-23 113.2 108 60.2
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 2.9e-23 112.1 103 57.3
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 3.8e-23 111.7 108 58.3
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 6.5e-23 110.9 93 59.1
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 8.5e-23 110.5 115 57.4
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 8.5e-23 110.5 108 56.5
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 8.5e-23 110.5 95 62.1
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 8.5e-23 110.5 95 62.1
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 1.1e-22 110.2 119 53.8
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 1.5e-22 109.8 95 62.1
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 1.5e-22 109.8 117 54.7
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 2.5e-22 109.0 84 65.5
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 3.2e-22 108.6 99 61.6
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 3.2e-22 108.6 94 59.6
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 5.5e-22 107.8 103 55.3
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 1.6e-21 106.3 106 57.5
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 2.1e-21 105.9 115 54.8
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 3.6e-21 105.1 104 55.8
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 3.6e-21 105.1 99 60.6
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 4.7e-21 104.8 113 54.9
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 6.1e-21 104.4 97 57.7
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.1e-21 104.4 110 54.5
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 6.1e-21 104.4 110 54.5
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 8.0e-21 104.0 70 72.9
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 8.0e-21 104.0 105 54.3
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 4.0e-20 101.7 98 55.1
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 5.2e-20 101.3 109 51.4
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 6.8e-20 100.9 108 55.6
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 6.8e-20 100.9 105 52.4
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 8.8e-20 100.5 110 51.8
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 8.8e-20 100.5 110 52.7
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 8.8e-20 100.5 110 52.7
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 8.8e-20 100.5 110 51.8
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.2e-19 100.1 100 58.0
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 1.5e-19 99.8 94 63.8
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 1.5e-19 99.8 120 54.2
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 2.0e-19 99.4 118 51.7
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 2.6e-19 99.0 56 83.9
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 4.4e-19 98.2 68 69.1
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 5.7e-19 97.8 91 59.3
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 5.7e-19 97.8 72 61.1
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 5.7e-19 97.8 98 55.1
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 9.7e-19 97.1 118 51.7
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 9.7e-19 97.1 114 53.5
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 1.3e-18 96.7 78 64.1
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 1.3e-18 96.7 118 52.5
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.7e-18 96.3 110 58.2
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 2.2e-18 95.9 78 62.8
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 2.8e-18 95.5 113 54.9
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 3.7e-18 95.1 78 62.8
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 3.7e-18 95.1 78 62.8
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 3.7e-18 95.1 78 62.8
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 3.7e-18 95.1 111 50.5
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 4.8e-18 94.7 98 57.1
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 6.3e-18 94.4 110 58.2
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 8.3e-18 94.0 90 57.8
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 1.1e-17 93.6 65 63.1
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.8e-17 92.8 117 53.0
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 5.3e-17 91.3 84 53.6
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 5.3e-17 91.3 84 53.6
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 1.6e-16 89.7 124 55.6
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.6e-16 89.7 88 55.7
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.0e-16 89.4 70 65.7
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 2.0e-16 89.4 110 48.2
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 2.0e-16 89.4 113 50.4
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.7e-16 89.0 111 49.5
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 1.0e-15 87.0 74 67.6
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 1.3e-15 86.7 110 48.2
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 1.7e-15 86.3 93 55.9
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 2.2e-15 85.9 68 61.8
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 5.0e-15 84.7 62 72.6
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 5.0e-15 84.7 63 68.3
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.1e-14 83.6 112 47.3
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 1.5e-14 83.2 74 63.5
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 1.9e-14 82.8 107 47.7
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 1.9e-14 82.8 102 49.0
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 2.5e-14 82.4 59 67.8
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 1.6e-13 79.7 120 47.5
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 1.4e-12 76.6 102 46.1
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 1.4e-12 76.6 106 47.2
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 3.0e-12 75.5 111 46.8
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 4.0e-12 75.1 67 61.2
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 6.8e-12 74.3 71 57.7
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 2.0e-11 72.8 98 48.0
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 1.3e-10 70.1 60 61.7
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 2.8e-10 68.9 77 50.6
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 7.0e-09 64.3 63 52.4
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 5.9e-08 61.2 51 58.8
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.0e-07 60.5 32 84.4
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.3e-07 60.1 68 48.5
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 6.6e-07 57.8 64 50.0
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 7.2e-06 54.3 44 54.5


User provided reference genes

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