Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 3.4e-189 664.8 337 100.0
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 3.4e-189 664.8 337 100.0
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 1.5e-181 639.4 337 96.4
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 3.8e-172 608.2 337 90.2
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 7.4e-168 594.0 337 88.7
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 1.3e-161 573.2 377 79.8
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.5e-149 533.1 278 97.5
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 1.4e-129 466.8 336 69.6
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 6.8e-129 464.5 340 70.3
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 4.1e-126 455.3 329 70.2
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 7.0e-126 454.5 329 69.9
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 1.7e-124 449.9 331 66.2
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 2.2e-124 449.5 335 67.8
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 2.2e-124 449.5 339 67.3
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 6.5e-124 448.0 329 69.3
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 1.5e-123 446.8 335 67.8
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 2.5e-123 446.0 333 69.4
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 5.5e-123 444.9 340 66.8
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.5e-123 444.9 340 67.6
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 7.2e-123 444.5 337 69.1
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 1.2e-122 443.7 338 67.5
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 2.1e-122 443.0 338 67.5
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 1.4e-121 440.3 337 65.9
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 1.8e-121 439.9 342 68.7
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 8.8e-121 437.6 333 67.3
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.7e-119 433.3 331 67.1
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 3.7e-119 432.2 339 66.4
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 8.3e-119 431.0 342 66.7
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 1.1e-118 430.6 338 68.3
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 1.4e-118 430.3 337 65.0
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.4e-118 429.5 329 67.8
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 2.4e-118 429.5 339 64.9
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.0e-117 426.4 339 65.8
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 3.5e-117 425.6 339 64.6
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 7.7e-117 424.5 338 65.7
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 1.3e-116 423.7 342 64.6
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 2.9e-116 422.5 338 66.0
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 5.0e-116 421.8 339 65.8
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 5.0e-116 421.8 331 66.8
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 8.6e-116 421.0 342 64.6
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 8.6e-116 421.0 333 65.5
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.1e-115 420.6 342 64.0
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 2.5e-115 419.5 344 65.1
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 1.6e-114 416.8 333 65.8
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 1.6e-114 416.8 336 63.4
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 1.6e-114 416.8 336 64.0
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 2.1e-114 416.4 337 62.9
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 2.1e-114 416.4 337 64.1
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 6.1e-114 414.8 336 63.7
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 8.0e-114 414.5 333 63.1
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 8.0e-114 414.5 336 63.7
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 1.8e-113 413.3 336 63.1
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 2.3e-113 412.9 340 64.4
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.2e-112 410.6 337 65.3
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.2e-112 410.6 337 65.3
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 1.2e-112 410.6 336 65.8
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 1.2e-112 410.6 333 64.9
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 2.6e-112 409.5 338 63.9
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 2.6e-112 409.5 335 62.1
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 2.6e-112 409.5 335 63.0
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 9.8e-112 407.5 341 63.0
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.7e-111 406.8 262 76.3
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 1.7e-111 406.8 331 64.7
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 2.9e-111 406.0 366 59.3
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 6.4e-111 404.8 339 62.5
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 5.4e-110 401.7 352 63.6
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 5.4e-110 401.7 340 63.8
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 1.2e-109 400.6 335 60.9
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.6e-109 400.2 340 63.5
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 3.5e-109 399.1 340 63.8
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 5.9e-109 398.3 336 61.6
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 1.0e-108 397.5 380 57.4
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 1.9e-107 393.3 271 73.1
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 7.3e-107 391.3 326 62.3
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 1.2e-106 390.6 317 62.8
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 1.2e-106 390.6 332 60.8
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 1.6e-106 390.2 361 58.2
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 1.6e-106 390.2 332 61.4
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 1.0e-105 387.5 347 60.2
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 5.8e-104 381.7 336 60.1
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 6.4e-103 378.3 286 67.1
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 1.4e-102 377.1 338 60.1
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 5.4e-102 375.2 371 54.4
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 5.4e-102 375.2 339 59.9
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 2.5e-99 366.3 339 57.8
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.6e-98 363.6 272 69.5
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 2.1e-98 363.2 270 66.3
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 3.6e-98 362.5 274 70.1
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 4.7e-98 362.1 287 66.9
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 2.6e-96 356.3 273 65.9
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 4.4e-96 355.5 283 65.7
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 5.4e-94 348.6 340 56.5
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 1.0e-92 344.4 286 62.6
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 4.3e-91 339.0 334 55.1
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 4.0e-89 332.4 286 60.8
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 1.7e-87 327.0 254 63.4
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 1.3e-84 317.4 295 61.4
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 1.7e-84 317.0 272 61.4
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 2.9e-79 299.7 250 58.0
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 4.6e-77 292.4 260 54.6
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.3e-71 274.2 280 52.1
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 3.5e-69 266.2 226 66.4
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 1.3e-66 257.7 262 54.2
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 6.9e-65 251.9 219 64.4
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 2.4e-62 243.4 252 49.2
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 7.1e-62 241.9 216 55.6
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.6e-61 240.7 156 75.0
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 2.1e-53 213.8 177 65.5
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 3.3e-51 206.5 223 54.3
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 9.6e-51 204.9 223 53.8
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 4.1e-49 199.5 236 46.2
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 1.2e-45 188.0 150 62.0
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 2.2e-42 177.2 273 40.7
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 4.1e-41 172.9 260 36.9
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 6.9e-41 172.2 203 54.2
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 4.0e-20 103.2 157 37.6
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 5.7e-19 99.4 58 74.1
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 6.1e-13 79.3 69 56.5
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 1.1e-09 68.6 37 75.7
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 7.7e-08 62.4 59 54.2
MD13G1066100 Malus domestica HOM05D002318 ORTHO05D008744 1.9e-06 57.8 76 44.7
CBR_g3150 Chara braunii HOM05D020303 ORTHO05D021299 7.2e-06 55.8 83 34.9


User provided reference genes

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