Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 9.3e-292 1006.1 504 100.0
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.4e-284 982.2 504 97.4
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 2.3e-282 974.9 504 97.0
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 3.6e-243 844.7 508 86.4
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.5e-220 768.8 451 86.7
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 4.9e-200 701.4 463 74.1
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.4e-199 699.9 509 69.4
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 1.0e-197 693.7 517 68.9
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.3e-195 686.8 510 67.5
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 2.1e-195 686.0 495 70.5
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 2.1e-195 686.0 511 67.7
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 2.1e-195 686.0 463 71.9
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.8e-194 682.9 514 66.9
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 3.1e-194 682.2 508 68.1
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 4.0e-194 681.8 508 68.5
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 6.9e-194 681.0 514 68.3
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 6.9e-194 681.0 459 73.4
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.5e-193 679.9 463 73.7
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 4.5e-193 678.3 463 73.4
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 1.3e-192 676.8 459 72.5
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 1.7e-192 676.4 467 71.3
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 3.8e-192 675.2 508 67.3
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 4.9e-192 674.9 467 71.9
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 1.1e-191 673.7 483 71.0
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.4e-191 673.3 491 70.9
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 5.4e-191 671.4 483 70.8
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 9.3e-191 670.6 463 72.6
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 2.7e-190 669.1 446 74.0
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.5e-190 668.7 483 70.4
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 4.6e-190 668.3 473 70.8
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 4.6e-190 668.3 459 72.5
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 7.9e-190 667.5 509 66.4
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.0e-189 667.2 459 72.3
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.3e-189 666.8 483 70.4
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.8e-189 666.4 509 66.2
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.8e-189 666.4 442 74.7
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 3.0e-189 665.6 473 70.2
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 6.7e-189 664.5 446 73.1
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 8.7e-189 664.1 462 71.0
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 1.1e-188 663.7 463 71.7
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.5e-188 663.3 510 65.7
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 3.3e-188 662.1 444 72.7
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 3.3e-188 662.1 511 66.7
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 3.3e-188 662.1 462 70.8
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.3e-187 660.2 465 71.4
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.2e-185 653.7 456 72.4
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 2.0e-185 652.9 504 68.7
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 7.6e-185 651.0 516 66.9
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 1.4e-183 646.7 458 70.5
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 2.4e-183 646.0 465 69.0
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 3.2e-183 645.6 452 70.8
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 4.2e-183 645.2 458 69.2
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 5.5e-183 644.8 457 69.6
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 9.3e-183 644.0 464 69.0
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.0e-181 640.6 454 69.6
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.8e-181 639.8 454 70.7
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 1.3e-179 633.6 493 63.9
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.4e-178 630.2 452 69.9
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.5e-177 626.7 469 64.6
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 2.6e-177 625.9 469 65.5
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 5.8e-177 624.8 452 68.6
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 7.6e-177 624.4 472 68.0
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 2.9e-176 622.5 445 69.4
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 4.9e-176 621.7 470 64.7
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 4.2e-175 618.6 435 70.6
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 2.7e-174 615.9 442 71.9
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 6.0e-174 614.8 452 67.3
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 5.1e-173 611.7 441 68.7
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.3e-171 607.1 445 67.4
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 1.6e-171 606.7 437 68.9
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 2.8e-171 605.9 426 70.7
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 8.2e-171 604.4 438 68.7
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 9.0e-170 600.9 464 65.7
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 7.2e-167 591.3 465 65.6
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.0e-165 587.4 513 59.1
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 2.3e-165 586.3 479 59.7
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 8.7e-165 584.3 442 66.3
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.5e-164 583.6 512 59.4
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 1.8e-162 576.6 457 63.5
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 2.4e-162 576.2 432 67.1
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 2.0e-161 573.2 451 62.5
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.6e-161 572.8 450 62.7
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 5.9e-161 571.6 447 63.3
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 5.9e-161 571.6 458 64.2
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 7.7e-161 571.2 514 57.8
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.1e-159 567.4 449 62.4
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 3.2e-159 565.8 452 62.4
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 4.2e-159 565.5 446 63.0
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 2.7e-158 562.8 464 60.6
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 3.6e-158 562.4 466 60.3
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 6.1e-158 561.6 449 61.7
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 3.3e-156 555.8 397 70.8
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 8.2e-155 551.2 420 63.6
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 2.0e-148 530.0 353 72.2
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 1.3e-147 527.3 380 69.5
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 1.4e-138 497.3 420 56.9
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 9.1e-138 494.6 429 56.2
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 8.0e-134 481.5 422 56.6
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 7.0e-122 441.8 389 59.4
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 5.2e-117 425.6 293 70.6
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 1.5e-111 407.5 426 48.4
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 5.4e-106 389.0 255 73.3
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 9.2e-106 388.3 378 53.7
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 3.2e-90 336.7 454 40.5
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 7.3e-87 325.5 422 45.5
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 3.6e-78 296.6 209 70.3
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.8e-72 277.7 233 62.7
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 3.1e-69 266.9 428 36.7
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 3.9e-64 250.0 150 79.3
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 8.7e-64 248.8 431 34.8
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 3.3e-55 220.3 134 80.6
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 3.9e-48 196.8 176 56.2
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 3.2e-42 177.2 228 45.6
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 2.0e-39 167.9 228 43.9
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 3.6e-33 147.1 127 57.5
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 6.1e-33 146.4 198 40.4
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 2.3e-32 144.4 148 50.0
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 3.5e-28 130.6 140 49.3
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 5.0e-19 100.1 143 39.9


User provided reference genes

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