Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 8.6e-179 630.2 313 100.0
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 5.8e-175 617.5 313 98.1
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 3.4e-167 591.7 318 92.1
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 5.4e-165 584.3 323 89.5
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 4.8e-161 571.2 311 91.6
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 1.1e-157 560.1 308 90.3
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 1.4e-141 506.5 265 97.0
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 2.6e-135 485.7 322 73.9
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 2.5e-133 479.2 322 73.3
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 3.6e-132 475.3 321 74.1
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 2.3e-131 472.6 319 72.4
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 6.7e-131 471.1 322 73.0
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 1.8e-128 463.0 321 72.9
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 3.1e-128 462.2 324 69.8
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 3.1e-128 462.2 322 71.1
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 1.5e-127 459.9 317 71.3
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 3.4e-127 458.8 321 70.7
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 5.9e-127 458.0 323 71.8
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.7e-126 456.4 319 70.2
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 3.8e-126 455.3 319 70.2
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 1.2e-124 450.3 324 69.4
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.6e-124 449.9 319 69.3
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 1.6e-124 449.9 322 71.1
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 3.9e-123 445.3 324 69.4
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 2.0e-122 443.0 326 69.3
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 2.6e-122 442.6 322 69.9
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 2.6e-122 442.6 320 68.4
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 3.3e-122 442.2 325 69.2
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 1.3e-121 440.3 323 68.4
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 1.7e-121 439.9 323 68.1
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.7e-121 439.9 359 63.8
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 1.7e-121 439.9 324 67.3
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 2.2e-121 439.5 343 65.6
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 2.4e-120 436.0 346 65.0
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 5.3e-120 434.9 319 68.0
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 5.3e-120 434.9 318 69.5
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 5.3e-120 434.9 313 70.6
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 9.1e-120 434.1 325 67.4
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 9.1e-120 434.1 318 69.8
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 1.5e-119 433.3 322 68.0
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 2.0e-119 433.0 318 67.9
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 2.6e-119 432.6 310 69.7
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 2.6e-119 432.6 323 67.5
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 2.6e-119 432.6 324 67.6
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 2.2e-118 429.5 322 67.1
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 2.9e-118 429.1 327 67.0
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 2.9e-118 429.1 322 68.6
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 2.9e-118 429.1 323 66.6
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 3.8e-118 428.7 313 67.1
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 6.5e-118 427.9 327 66.7
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.1e-117 427.2 315 67.6
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 1.1e-117 427.2 321 66.4
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 3.2e-117 425.6 325 67.1
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 5.5e-117 424.9 323 65.6
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 7.2e-117 424.5 343 64.1
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 9.4e-117 424.1 325 67.7
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 9.4e-117 424.1 321 66.7
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 1.6e-116 423.3 314 68.8
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 4.7e-116 421.8 319 67.1
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 4.7e-116 421.8 317 67.2
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 4.7e-116 421.8 323 66.3
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 2.3e-115 419.5 312 66.3
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.2e-115 418.3 313 67.1
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 8.8e-115 417.5 313 67.7
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 1.5e-114 416.8 312 66.3
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.5e-114 416.8 312 66.3
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.5e-114 416.8 313 66.8
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 2.6e-114 416.0 284 74.6
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 2.6e-114 416.0 328 64.6
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 3.3e-114 415.6 313 66.8
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 7.4e-114 414.5 323 66.3
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 1.7e-113 413.3 317 65.0
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 1.8e-112 409.8 315 67.0
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 4.1e-112 408.7 313 66.1
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 4.5e-111 405.2 308 64.6
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 1.3e-110 403.7 325 63.7
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 7.2e-109 397.9 311 65.6
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 1.4e-107 393.7 314 64.0
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 1.8e-107 393.3 310 63.5
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 5.2e-107 391.7 318 63.5
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 2.6e-106 389.4 323 61.3
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 2.6e-106 389.4 311 63.0
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 3.7e-105 385.6 310 61.3
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 1.4e-104 383.6 321 62.3
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 5.3e-104 381.7 321 62.0
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 5.9e-103 378.3 319 62.1
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 5.9e-103 378.3 321 61.1
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 1.7e-102 376.7 321 61.7
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 2.2e-102 376.3 318 61.3
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 3.8e-102 375.6 312 61.2
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 6.5e-102 374.8 321 61.1
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 2.7e-100 369.4 318 60.4
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 1.8e-99 366.7 339 58.1
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 3.4e-98 362.5 319 58.9
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 9.8e-98 360.9 275 67.3
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 1.3e-97 360.5 323 59.1
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 2.8e-97 359.4 323 59.1
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 8.3e-97 357.8 314 59.6
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 8.3e-97 357.8 319 58.9
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 7.7e-95 351.3 322 59.0
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 2.9e-94 349.4 323 58.2
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 2.9e-94 349.4 311 58.5
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 5.0e-94 348.6 324 59.3
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 8.6e-94 347.8 320 58.4
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 1.5e-93 347.1 320 58.4
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 7.2e-93 344.7 328 56.7
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 4.7e-92 342.0 315 56.8
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 1.8e-91 340.1 314 59.2
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 4.0e-91 339.0 325 55.1
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 6.3e-89 331.6 315 56.5
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 1.7e-86 323.6 307 57.3
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.3e-81 307.4 283 56.9
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 2.6e-74 283.1 312 47.8
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 4.0e-67 259.2 242 57.9
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 8.1e-60 235.0 147 76.2
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 2.4e-59 233.4 151 74.2
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 2.7e-55 219.9 134 76.9
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 7.8e-55 218.4 132 75.8
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 1.0e-54 218.0 179 55.3
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 1.3e-54 217.6 140 72.1
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 3.9e-54 216.1 167 65.3
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 6.2e-52 208.8 324 38.3
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 8.1e-52 208.4 164 55.5
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.0e-50 203.8 275 40.7
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 5.8e-50 202.2 179 50.8
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 1.7e-49 200.7 223 52.5
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 6.0e-47 192.2 104 81.7
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 4.2e-40 169.5 172 55.2
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.3e-36 157.9 149 58.4
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 2.5e-29 133.7 124 50.0
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 3.4e-26 123.2 177 42.9
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 6.9e-19 99.0 53 83.0
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 9.4e-16 88.6 67 62.7
TAR623G0420 Trochodendron aralioides HOM05D004567 ORTHO05D037809 4.6e-15 86.3 149 40.3
FvH4_7g08791 Fragaria vesca HOM05D004567 ORTHO05D045614 8.8e-06 55.5 57 56.1


User provided reference genes

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