Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 6.7e-207 723.8 363 100.0
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 1.2e-200 703.0 363 96.4
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 3.5e-200 701.4 363 96.4
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 2.6e-179 632.1 359 88.6
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 6.5e-178 627.5 365 87.1
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.4e-177 626.3 365 87.4
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 6.0e-131 471.5 372 66.9
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 3.4e-126 455.7 367 64.3
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 4.4e-126 455.3 367 64.9
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 3.7e-125 452.2 367 64.6
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.6e-123 446.8 373 61.4
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 2.1e-123 446.4 373 61.4
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 2.7e-123 446.0 374 61.2
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 6.0e-123 444.9 372 63.2
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.3e-122 443.7 375 63.7
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 8.6e-122 441.0 389 60.2
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.1e-121 440.7 355 63.7
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.3e-121 438.7 375 61.6
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 4.3e-121 438.7 364 64.0
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.2e-120 437.2 384 62.0
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 1.6e-120 436.8 362 63.5
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 3.6e-120 435.6 366 63.7
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.4e-119 433.7 371 61.2
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 3.1e-119 432.6 371 60.6
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.0e-119 432.2 373 60.3
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.2e-118 430.6 368 61.4
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 1.5e-118 430.3 379 61.2
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 2.0e-118 429.9 371 63.6
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 2.0e-118 429.9 360 62.5
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.4e-118 429.1 371 62.0
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.4e-118 428.7 376 61.2
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 5.8e-118 428.3 376 61.4
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 4.9e-117 425.2 374 58.8
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 4.9e-117 425.2 366 62.0
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.9e-116 423.3 374 62.8
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 2.4e-116 422.9 361 62.0
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 5.4e-116 421.8 368 57.3
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 2.1e-115 419.9 370 61.1
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 6.0e-115 418.3 398 56.8
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 6.0e-115 418.3 379 58.6
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 7.8e-115 417.9 370 60.0
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 7.8e-115 417.9 356 61.8
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.7e-114 416.8 366 59.6
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 3.9e-114 415.6 369 60.4
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 6.6e-114 414.8 351 60.7
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.1e-113 414.1 359 59.9
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.5e-113 413.7 371 59.0
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 2.5e-113 412.9 359 61.8
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 3.6e-112 409.1 365 59.5
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.1e-111 407.5 438 53.2
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 1.1e-111 407.5 374 57.5
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 5.2e-111 405.2 370 57.8
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 6.8e-111 404.8 331 62.2
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 1.2e-110 404.1 324 65.4
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.5e-110 403.7 365 57.5
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 1.5e-110 403.7 387 57.6
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 4.9e-109 398.7 372 56.7
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 8.4e-109 397.9 376 57.4
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 4.1e-108 395.6 337 59.3
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 5.4e-108 395.2 325 61.5
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.2e-107 394.0 336 59.5
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.6e-107 393.7 365 58.1
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.7e-107 392.9 352 58.2
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 3.5e-107 392.5 373 58.2
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 3.5e-107 392.5 345 60.3
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 7.8e-107 391.3 363 57.0
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 7.8e-107 391.3 364 56.3
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.0e-106 391.0 357 57.7
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.0e-106 391.0 359 57.7
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.3e-106 390.6 385 57.7
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 3.9e-106 389.0 357 57.7
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 5.1e-106 388.7 352 57.7
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 8.7e-106 387.9 352 58.2
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 8.7e-106 387.9 357 57.1
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 3.3e-105 386.0 352 57.4
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 5.6e-105 385.2 323 61.3
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 9.6e-105 384.4 333 59.5
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 2.1e-104 383.3 333 59.2
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 3.6e-104 382.5 333 59.2
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 3.6e-104 382.5 371 54.2
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.1e-103 380.9 374 55.6
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.4e-103 379.8 354 57.3
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.7e-101 373.6 343 56.0
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 7.1e-100 368.2 287 63.4
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.2e-99 367.5 289 64.0
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.0e-98 362.8 277 66.8
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.2e-94 350.9 275 63.3
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 4.5e-94 349.0 337 57.6
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.7e-93 347.1 374 54.0
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.9e-93 346.3 371 54.4
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 6.0e-91 338.6 263 64.3
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 7.4e-89 331.6 395 47.6
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 3.7e-88 329.3 238 69.3
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.2e-86 324.3 342 52.3
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 4.5e-86 322.4 235 69.4
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 7.6e-86 321.6 341 52.2
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.1e-84 317.8 318 53.5
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.9e-84 317.0 334 51.8
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.7e-83 313.2 274 55.5
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.8e-82 310.5 258 64.0
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.8e-82 310.5 184 77.2
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.8e-79 300.4 359 49.6
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 4.5e-78 295.8 171 78.9
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 7.1e-76 288.5 320 47.8
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.5e-73 280.0 300 54.3
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 2.2e-72 276.9 279 52.3
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 4.1e-55 219.5 227 51.1
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.3e-48 198.0 202 55.0
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 4.2e-44 183.0 113 70.8
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 8.0e-43 178.7 244 42.2
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.3e-37 161.4 250 42.8
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.2e-35 154.8 140 55.7
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.8e-34 151.0 198 42.9
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.2e-32 144.1 183 45.9
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.5e-25 121.3 71 81.7
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.5e-12 78.2 100 48.0
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 9.5e-12 75.5 63 55.6
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.5e-09 68.2 78 42.3
Medtr4g025750 Medicago truncatula HOM05D006491 ORTHO05D008317 2.7e-06 57.4 70 45.7
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.6e-06 56.6 63 55.6


User provided reference genes

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