Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401025788 Solanum tuberosum HOM05D011234 ORTHO05D003195 1.2e-141 506.5 257 100.0
Sopen01g050330 Solanum pennellii HOM05D011234 ORTHO05D003195 2.0e-125 452.6 257 89.9
Solyc01g108100.3 Solanum lycopersicum HOM05D011234 ORTHO05D003195 2.7e-122 442.2 260 89.6
Peaxi162Scf00016g01956 Petunia axillaris HOM05D011234 ORTHO05D003195 5.2e-73 278.5 240 65.0
PGSC0003DMG400006224 Solanum tuberosum HOM05D011234 ORTHO05D003195 8.1e-50 201.4 252 51.6
Solyc10g050220.2 Solanum lycopersicum HOM05D011234 ORTHO05D003195 1.5e-48 197.2 260 50.4
Sopen10g021380 Solanum pennellii HOM05D011234 ORTHO05D003195 1.4e-46 190.7 247 50.2
Nitab4.5_0002543g0100 Nicotiana tabacum HOM05D011234 ORTHO05D003195 6.2e-42 175.3 237 46.8
Nitab4.5_0007480g0060 Nicotiana tabacum HOM05D011234 ORTHO05D003195 2.2e-39 166.8 307 41.0
Peaxi162Scf00003g02336 Petunia axillaris HOM05D011234 ORTHO05D003195 2.1e-29 133.7 184 44.6
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 8.5e-23 111.7 230 37.8
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 4.2e-22 109.4 261 35.2
Cc02_g18840 Coffea canephora HOM05D011234 ORTHO05D003195 3.6e-21 106.3 249 34.9
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 1.8e-20 104.0 262 33.6
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 2.6e-19 100.1 246 33.7
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 2.2e-18 97.1 243 35.4
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 2.6e-16 90.1 237 31.6
Migut.B00353 Erythranthe guttata HOM05D011234 ORTHO05D003195 3.8e-15 86.3 234 32.9
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 2.5e-14 83.6 259 31.7
SalBow6G6536 Salvia bowleyana HOM05D011234 ORTHO05D003195 2.5e-14 83.6 245 30.6
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 5.5e-14 82.4 252 33.3
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 7.9e-13 78.6 233 30.9
MSTRG.20159 Avicennia marina HOM05D011234 ORTHO05D003195 3.9e-12 76.3 250 30.8
Migut.N01186 Erythranthe guttata HOM05D011234 ORTHO05D003195 5.2e-12 75.9 216 31.5
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 9.7e-11 71.6 259 29.7
Atru.chr5.2692 Acer truncatum HOM05D003792 ORTHO05D003195 1.3e-10 71.2 240 32.5
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 2.2e-10 70.5 131 37.4
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 2.8e-10 70.1 134 37.3
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 4.8e-10 69.3 273 28.9
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 6.3e-10 68.9 250 29.2
Ciclev10029147m.g Citrus clementina HOM05D003792 ORTHO05D003195 1.1e-09 68.2 258 30.2
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 1.8e-09 67.4 209 30.1
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 1.8e-09 67.4 231 27.7
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 2.4e-09 67.0 232 28.4
Oeu007289.1 Olea europaea HOM05D011234 ORTHO05D003195 4.1e-09 66.2 170 32.9
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 7.0e-09 65.5 117 35.9
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 7.0e-09 65.5 231 30.7
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 2.6e-08 63.5 239 30.5
Lalb_Chr05g0219211 Lupinus albus HOM05D003792 ORTHO05D003195 4.5e-08 62.8 243 27.2
SGA_v2.0_scaffold32G13060 Striga asiatica HOM05D003792 ORTHO05D003195 4.5e-08 62.8 263 28.5
Lj4g0023306 Lotus japonicus HOM05D003792 ORTHO05D003195 5.9e-08 62.4 249 30.5
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 1.3e-07 61.2 192 30.7
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.3e-07 61.2 249 30.1
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 5.0e-07 59.3 245 27.8
Duzib052G0481 Durio zibethinus HOM05D003792 ORTHO05D003195 5.0e-07 59.3 250 29.2
Lalb_Chr22g0355111 Lupinus albus HOM05D003792 ORTHO05D003195 5.0e-07 59.3 183 31.1
Psat7g125520 Pisum sativum HOM05D003792 ORTHO05D003195 5.0e-07 59.3 202 29.7
Glyma.02G131800 Glycine max HOM05D003792 ORTHO05D003195 6.5e-07 58.9 264 29.5
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 6.5e-07 58.9 255 26.3
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 1.5e-06 57.8 221 28.5
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 1.9e-06 57.4 190 28.9
Phvul.003G291900 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 1.9e-06 57.4 204 30.9
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 2.5e-06 57.0 240 29.2
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 2.5e-06 57.0 201 29.9
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 3.2e-06 56.6 250 28.4
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 3.2e-06 56.6 192 28.1
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 3.2e-06 56.6 254 28.0
Sed0003020 Sechium edule HOM05D003792 ORTHO05D003195 3.2e-06 56.6 216 24.5
Sed0006191 Sechium edule HOM05D003792 ORTHO05D003195 3.2e-06 56.6 194 27.3
VMungo0251G0642 Vigna mungo HOM05D003792 ORTHO05D003195 3.2e-06 56.6 232 28.0
Medtr4g085990 Medicago truncatula HOM05D003792 ORTHO05D003195 5.5e-06 55.8 242 28.9
ClCG02G005970 Citrullus lanatus HOM05D003792 ORTHO05D003195 7.2e-06 55.5 192 29.2
Lsat_1_v5_gn_6_111920 Lactuca sativa HOM05D003792 ORTHO05D003195 7.2e-06 55.5 122 29.5
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 9.4e-06 55.1 241 29.5
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 9.4e-06 55.1 198 27.3


User provided reference genes

Program Settings