Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401024092 Solanum tuberosum HOM05D004716 ORTHO05D005646 1.6e-49 199.9 169 100.0
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 2.5e-39 166.0 161 81.4
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 8.9e-37 157.5 161 88.2
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 8.6e-32 141.0 163 65.0
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 2.5e-31 139.4 163 65.0
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 3.9e-24 115.5 162 74.1
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 1.5e-20 103.6 160 66.2
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 1.7e-16 90.1 180 38.3
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 6.6e-16 88.2 162 36.4
Actinidia10651 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.9e-15 86.7 166 42.2
CSS0021208 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 1.6e-14 83.6 163 54.6
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 8.1e-14 81.3 167 38.9
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 1.4e-13 80.5 170 37.1
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 2.3e-13 79.7 176 46.0
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 4.0e-13 79.0 160 33.8
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 5.2e-13 78.6 173 48.6
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 1.5e-12 77.0 162 34.6
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 2.6e-12 76.3 160 34.4
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 3.4e-12 75.9 163 35.6
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 4.4e-12 75.5 162 34.0
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 4.4e-12 75.5 161 42.2
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 4.4e-12 75.5 160 36.2
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 4.4e-12 75.5 162 53.1
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 9.9e-12 74.3 165 36.4
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 9.9e-12 74.3 164 51.2
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 9.9e-12 74.3 160 31.9
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 1.3e-11 73.9 178 33.1
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 1.3e-11 73.9 178 33.1
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 1.3e-11 73.9 165 38.2
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.7e-11 73.6 160 40.6
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 2.2e-11 73.2 170 32.4
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 2.2e-11 73.2 165 35.8
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 3.7e-11 72.4 160 35.0
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 4.9e-11 72.0 162 33.3
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 4.9e-11 72.0 164 36.0
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 6.4e-11 71.6 162 39.5
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 6.4e-11 71.6 162 32.1
Cpa.g.sc21.191 Carica papaya HOM05D004716 ORTHO05D005646 8.3e-11 71.2 161 32.9
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 8.3e-11 71.2 164 35.4
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 8.3e-11 71.2 162 34.0
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 8.3e-11 71.2 160 32.5
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 1.1e-10 70.9 162 34.0
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 1.1e-10 70.9 162 32.7
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 1.4e-10 70.5 161 34.8
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 1.4e-10 70.5 163 37.4
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 1.9e-10 70.1 160 33.8
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 2.4e-10 69.7 160 32.5
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 3.2e-10 69.3 164 53.0
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.2e-10 69.3 162 34.0
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 3.2e-10 69.3 162 34.0
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 4.1e-10 68.9 161 32.3
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 4.1e-10 68.9 164 34.1
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 9.2e-10 67.8 164 33.5
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 9.2e-10 67.8 168 32.7
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 1.2e-09 67.4 163 33.7
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.2e-09 67.4 161 34.8
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.6e-09 67.0 163 45.4
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.6e-09 67.0 163 42.9
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 1.6e-09 67.0 163 44.2
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 1.6e-09 67.0 160 32.5
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 2.1e-09 66.6 162 46.9
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 2.7e-09 66.2 167 31.7
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 3.5e-09 65.9 160 39.4
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 4.6e-09 65.5 164 34.1
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 4.6e-09 65.5 163 34.4
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 4.6e-09 65.5 177 31.6
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 6.0e-09 65.1 167 33.5
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 7.8e-09 64.7 182 40.7
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 7.8e-09 64.7 172 30.2
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 7.8e-09 64.7 179 39.7
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 1.0e-08 64.3 162 31.5
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 1.0e-08 64.3 161 32.3
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 1.3e-08 63.9 168 36.3
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 1.7e-08 63.5 160 48.8
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 2.3e-08 63.2 169 30.2
Ca_25987_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 3.0e-08 62.8 165 32.1
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 3.0e-08 62.8 160 31.2
HanXRQChr10g0277851 Helianthus annuus HOM05D004716 ORTHO05D005646 3.0e-08 62.8 38 68.4
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 3.9e-08 62.4 162 45.7
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 3.9e-08 62.4 160 31.9
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 3.9e-08 62.4 167 31.7
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 5.1e-08 62.0 167 31.7
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 5.1e-08 62.0 160 31.2
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 6.6e-08 61.6 160 30.6
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 8.6e-08 61.2 173 45.7
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 1.1e-07 60.8 202 28.2
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 1.9e-07 60.1 158 32.3
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 1.9e-07 60.1 158 32.3
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 2.5e-07 59.7 165 37.6
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 2.5e-07 59.7 162 31.5
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 3.3e-07 59.3 163 33.1
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 4.3e-07 58.9 160 30.0
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 5.6e-07 58.5 170 32.4
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 5.6e-07 58.5 37 67.6
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 5.6e-07 58.5 162 38.3
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 9.5e-07 57.8 164 31.1
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 9.5e-07 57.8 172 36.0
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 1.2e-06 57.4 171 31.0
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 1.2e-06 57.4 37 64.9
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 2.1e-06 56.6 171 39.2
Oeu014494.1 Olea europaea HOM05D004716 ORTHO05D005646 2.1e-06 56.6 35 71.4
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 2.8e-06 56.2 157 31.2
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 2.8e-06 56.2 157 31.2
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 2.8e-06 56.2 34 70.6
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 2.8e-06 56.2 154 30.5
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 3.6e-06 55.8 166 38.0
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 4.7e-06 55.5 165 29.7


User provided reference genes

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