Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 0.0e+00 1669.8 864 100.0
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 0.0e+00 1538.9 864 92.9
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 0.0e+00 1527.7 864 92.4
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 0.0e+00 1270.0 878 78.9
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1167.5 797 79.0
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1144.0 822 76.0
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 9.0e-295 1016.9 955 62.2
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 4.0e-125 453.4 860 39.5
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 9.5e-119 432.2 907 36.7
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 3.1e-117 427.2 926 37.6
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 3.5e-113 413.7 695 40.7
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 3.0e-112 410.6 878 36.3
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 2.1e-110 404.4 822 38.0
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 8.1e-110 402.5 877 37.5
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 6.8e-109 399.4 885 36.8
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 4.4e-108 396.7 847 36.1
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 4.4e-108 396.7 839 36.7
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 3.8e-107 393.7 861 36.4
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 1.2e-105 388.7 822 36.3
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 3.0e-104 384.0 854 35.8
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 1.1e-103 382.1 865 36.6
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 1.9e-103 381.3 854 36.4
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.4e-100 370.5 867 34.4
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 2.9e-99 367.5 503 45.3
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 4.9e-99 366.7 819 36.1
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.1e-98 365.5 853 35.2
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 1.9e-98 364.8 841 36.1
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 9.3e-98 362.5 877 33.4
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.7e-96 358.2 528 41.9
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 3.9e-96 357.1 855 34.4
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 4.3e-95 353.6 700 37.6
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 5.6e-95 353.2 544 43.0
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.1e-93 349.0 815 35.7
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 1.4e-93 348.6 837 35.2
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 1.4e-93 348.6 875 34.3
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 2.0e-92 344.7 844 36.0
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 5.8e-92 343.2 757 36.5
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 7.6e-92 342.8 528 41.9
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 8.4e-91 339.3 804 34.3
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.1e-90 339.0 838 34.8
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 2.4e-90 337.8 822 34.2
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 4.2e-90 337.0 907 33.7
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 7.1e-90 336.3 594 38.7
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.2e-89 335.5 836 34.6
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.6e-89 335.1 882 32.4
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 3.5e-89 334.0 841 33.3
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 3.5e-89 334.0 854 33.8
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 3.5e-89 334.0 877 33.0
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 1.0e-88 332.4 859 32.6
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.0e-88 332.4 856 33.1
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 2.3e-88 331.3 923 32.9
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 6.7e-88 329.7 826 33.5
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 1.9e-87 328.2 875 32.8
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 3.3e-87 327.4 567 41.8
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 5.6e-87 326.6 805 34.3
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 4.0e-85 320.5 873 32.3
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 1.5e-84 318.5 845 31.7
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 4.5e-84 317.0 801 34.8
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 7.1e-82 309.7 798 34.1
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 9.3e-82 309.3 822 32.1
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.2e-81 308.9 843 32.7
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 3.5e-81 307.4 893 32.0
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.3e-80 305.4 812 32.9
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.3e-80 305.4 586 38.9
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 3.9e-80 303.9 850 31.8
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 1.5e-79 302.0 842 33.1
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 4.3e-79 300.4 821 32.9
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 7.4e-79 299.7 573 37.3
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 7.4e-79 299.7 844 32.0
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 1.3e-78 298.9 861 30.9
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 3.7e-78 297.4 868 31.9
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 1.8e-77 295.0 827 32.5
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 7.6e-76 289.7 886 31.9
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 9.3e-74 282.7 918 29.1
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 1.6e-73 282.0 887 30.9
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 3.9e-72 277.3 637 36.3
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 4.1e-69 267.3 742 32.5
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 1.2e-68 265.8 917 30.2
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 2.0e-68 265.0 293 51.9
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 3.8e-67 260.8 928 29.5
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 1.5e-63 248.8 481 37.4
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 3.3e-63 247.7 817 29.7
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 6.3e-62 243.4 860 29.5
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 1.2e-60 239.2 883 30.5
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 3.4e-60 237.7 676 30.5
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 1.7e-59 235.3 851 29.7
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 3.2e-58 231.1 839 29.3
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 3.2e-58 231.1 635 32.9
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 8.8e-56 223.0 800 29.2
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 1.1e-55 222.6 823 29.2
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 5.7e-55 220.3 833 29.2
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 5.7e-55 220.3 833 29.2
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 2.2e-54 218.4 847 28.2
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 1.4e-53 215.7 569 33.0
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 1.8e-53 215.3 835 28.5
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 8.0e-49 199.9 725 29.0
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 2.6e-47 194.9 725 28.8
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 6.3e-46 190.3 523 30.8
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 1.1e-45 189.5 660 28.8
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 9.1e-45 186.4 577 30.5
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 1.2e-44 186.0 689 30.6
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 5.9e-44 183.7 551 28.7
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 6.5e-43 180.3 461 29.9
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.5e-42 179.1 628 28.7
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 1.5e-42 179.1 607 29.3
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 1.2e-41 176.0 857 26.5
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.6e-36 159.1 159 55.3
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 1.2e-25 122.9 194 41.8
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 2.3e-16 92.0 146 37.0
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.1e-09 68.9 211 28.9
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 6.2e-09 67.4 428 24.1
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 6.2e-09 67.4 428 24.1
FvH4_5g06191 Fragaria vesca HOM05D001393 ORTHO05D007477 8.9e-08 63.5 73 52.1
Mapoly0003s0122 Marchantia polymorpha HOM05D020720 ORTHO05D007477 4.9e-06 57.8 109 33.0


User provided reference genes

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