Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401023121 Solanum tuberosum HOM05D002994 ORTHO05D003337 2.8e-46 188.3 102 100.0
Sopen04g022430 Solanum pennellii HOM05D002994 ORTHO05D003337 5.9e-36 154.1 86 93.0
Nitab4.5_0000344g0060 Nicotiana tabacum HOM05D002994 ORTHO05D003337 5.5e-34 147.5 86 90.7
Solyc04g051120.4 Solanum lycopersicum HOM05D002994 ORTHO05D003337 9.4e-34 146.7 80 96.2
Peaxi162Scf00215g00114 Petunia axillaris HOM05D002994 ORTHO05D003337 1.3e-30 136.3 79 92.4
Nitab4.5_0003944g0060 Nicotiana tabacum HOM05D002994 ORTHO05D003337 6.3e-30 134.0 94 78.7
Oeu007687.2 Olea europaea HOM05D002994 ORTHO05D003337 5.9e-28 127.5 91 74.7
Migut.F02068 Erythranthe guttata HOM05D002994 ORTHO05D003337 1.3e-27 126.3 91 76.9
Ciclev10021599m.g Citrus clementina HOM05D002994 ORTHO05D003337 2.3e-27 125.6 84 81.0
Gohir.A08G218300 Gossypium hirsutum HOM05D002994 ORTHO05D003337 2.3e-27 125.6 91 76.9
Potri.013G052700 Populus trichocarpa HOM05D002994 ORTHO05D003337 5.0e-27 124.4 85 80.0
TAR633G0952 Trochodendron aralioides HOM05D002994 ORTHO05D003337 5.0e-27 124.4 92 73.9
MSTRG.9226 Avicennia marina HOM05D002994 ORTHO05D003337 6.5e-27 124.0 91 74.7
CiPaw.09G139200 Carya illinoinensis HOM05D002994 ORTHO05D003337 1.5e-26 122.9 88 76.1
Sabra19G0037200 Salix brachista HOM05D002994 ORTHO05D003337 1.5e-26 122.9 87 77.0
Sabra19G0039700 Salix brachista HOM05D002994 ORTHO05D003337 1.5e-26 122.9 87 77.0
Rhsim02G0173800 Rhododendron simsii HOM05D002994 ORTHO05D003337 4.2e-26 121.3 90 72.2
Duzib177G0745 Durio zibethinus HOM05D002994 ORTHO05D003337 7.2e-26 120.6 91 76.9
Gorai.004G250100 Gossypium raimondii HOM05D002994 ORTHO05D003337 9.5e-26 120.2 86 75.6
RcHm_v2.0_Chr6g0288361 Rosa chinensis HOM05D002994 ORTHO05D003337 9.5e-26 120.2 91 74.7
QL02p017328 Quercus lobata HOM05D002994 ORTHO05D003337 1.2e-25 119.8 86 76.7
Thecc.05G260600 Theobroma cacao HOM05D002994 ORTHO05D003337 1.2e-25 119.8 84 77.4
CsaV3_3G022500 Cucumis sativus L. HOM05D002994 ORTHO05D003337 2.8e-25 118.6 81 80.2
Potri.019G030400 Populus trichocarpa HOM05D002994 ORTHO05D003337 2.8e-25 118.6 86 76.7
Atru.chr2.1245 Acer truncatum HOM05D002994 ORTHO05D003337 4.7e-25 117.9 84 76.2
Gohir.D11G250500 Gossypium hirsutum HOM05D002994 ORTHO05D003337 4.7e-25 117.9 91 70.3
Gorai.007G268600 Gossypium raimondii HOM05D002994 ORTHO05D003337 4.7e-25 117.9 91 70.3
FvH4_2g21680 Fragaria vesca HOM05D002994 ORTHO05D003337 6.1e-25 117.5 91 72.5
FAN15G1600 Fragaria x ananassa HOM05D002994 ORTHO05D003337 6.1e-25 117.5 91 72.5
FAN24G2383 Fragaria x ananassa HOM05D002994 ORTHO05D003337 6.1e-25 117.5 91 72.5
FAN27G0312 Fragaria x ananassa HOM05D002994 ORTHO05D003337 6.1e-25 117.5 91 72.5
Manes.09G144700 Manihot esculenta HOM05D002994 ORTHO05D003337 6.1e-25 117.5 83 77.1
Eucgr.H04156 Eucalyptus grandis HOM05D002994 ORTHO05D003337 8.0e-25 117.1 84 76.2
Gohir.D08G235500 Gossypium hirsutum HOM05D002994 ORTHO05D003337 8.0e-25 117.1 84 76.2
TWI34G0844 Tripterygium wilfordii HOM05D002994 ORTHO05D003337 8.0e-25 117.1 83 74.7
MELO3C012902.2 Cucumis melo HOM05D002994 ORTHO05D003337 1.0e-24 116.7 81 79.0
MD10G1185200 Malus domestica HOM05D002994 ORTHO05D003337 1.4e-24 116.3 91 72.5
QL05p081668 Quercus lobata HOM05D002994 ORTHO05D003337 1.4e-24 116.3 84 76.2
GSVIVG01026377001 Vitis vinifera HOM05D002994 ORTHO05D003337 1.4e-24 116.3 85 72.9
PGR004G1910 Punica granatum HOM05D002994 ORTHO05D003337 1.8e-24 115.9 82 76.8
Lj2C51T6 Lonicera japonica HOM05D002994 ORTHO05D003337 2.3e-24 115.5 74 83.8
Aa31sc1107G10 Aethionema arabicum HOM05D002994 ORTHO05D003337 5.2e-24 114.4 91 68.1
Carub.0001s0789 Capsella rubella HOM05D002994 ORTHO05D003337 6.8e-24 114.0 78 75.6
CSS0027841 Camellia sinensis var. sinensis HOM05D002994 ORTHO05D003337 8.9e-24 113.6 84 75.0
Ca_18953_v3 Cicer arietinum L. HOM05D002994 ORTHO05D003337 8.9e-24 113.6 86 69.8
Duzib128G2066 Durio zibethinus HOM05D002994 ORTHO05D003337 8.9e-24 113.6 82 76.8
Prupe.8G225000 Prunus persica HOM05D002994 ORTHO05D003337 1.2e-23 113.2 91 70.3
Lalb_Chr03g0024371 Lupinus albus HOM05D002994 ORTHO05D003337 1.5e-23 112.8 83 72.3
Dinv03229 Davidia involucrata HOM05D002994 ORTHO05D003337 3.4e-23 111.7 84 71.4
AL1G18960 Arabidopsis lyrata HOM05D002994 ORTHO05D003337 4.4e-23 111.3 85 65.9
C05p06630 Brassica napus HOM05D002994 ORTHO05D003337 4.4e-23 111.3 79 72.2
CARHR008430 Cardamine hirsuta HOM05D002994 ORTHO05D003337 4.4e-23 111.3 86 67.4
Sed0012175 Sechium edule HOM05D002994 ORTHO05D003337 4.4e-23 111.3 82 76.8
Lj3g0016982 Lotus japonicus HOM05D002994 ORTHO05D003337 5.7e-23 110.9 81 72.8
Sp1g07190 Schrenkiella parvula HOM05D002994 ORTHO05D003337 5.7e-23 110.9 86 66.3
AT1G08530 Arabidopsis thaliana HOM05D002994 ORTHO05D003337 7.5e-23 110.5 78 71.8
TPR.G19622 Trifolium pratense HOM05D002994 ORTHO05D003337 7.5e-23 110.5 87 67.8
BcaB07g34096 Brassica carinata HOM05D002994 ORTHO05D003337 1.3e-22 109.8 87 67.8
BolC5t29423H Brassica oleracea HOM05D002994 ORTHO05D003337 1.3e-22 109.8 79 70.9
BraA06t23760Z Brassica rapa HOM05D002994 ORTHO05D003337 1.3e-22 109.8 79 70.9
Cc09_g03220 Coffea canephora HOM05D002994 ORTHO05D003337 1.3e-22 109.8 91 68.1
Cpa.g.sc51.69 Carica papaya HOM05D002994 ORTHO05D003337 1.7e-22 109.4 84 71.4
Thhalv10008466m.g Eutrema salsugineum HOM05D002994 ORTHO05D003337 2.2e-22 109.0 75 74.7
Aqoxy2G04007 Aquilegia oxysepala HOM05D002994 ORTHO05D003337 2.8e-22 108.6 85 70.6
Phvul.011G018900 Phaseolus vulgaris HOM05D002994 ORTHO05D003337 3.7e-22 108.2 87 65.5
Prupe.1G354200 Prunus persica HOM05D002994 ORTHO05D003337 3.7e-22 108.2 85 74.1
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 4.9e-22 107.8 86 67.4
MD05G1199200 Malus domestica HOM05D002994 ORTHO05D003337 4.9e-22 107.8 95 68.4
Medtr4g078130 Medicago truncatula HOM05D002994 ORTHO05D003337 4.9e-22 107.8 86 67.4
AUR62000658 Chenopodium quinoa HOM05D002994 ORTHO05D003337 6.3e-22 107.5 79 73.4
A06p05520 Brassica napus HOM05D002994 ORTHO05D003337 8.3e-22 107.1 79 69.6
PSO063G0038 Papaver somniferum HOM05D002994 ORTHO05D003337 1.1e-21 106.7 86 68.6
PSO017G4550 Papaver somniferum HOM05D002994 ORTHO05D003337 1.4e-21 106.3 86 68.6
ATR0561G058 Amborella trichopoda HOM05D002994 ORTHO05D003337 3.1e-21 105.1 78 71.8
MSTRG.27426 Avicennia marina HOM05D002994 ORTHO05D003337 7.0e-21 104.0 84 66.7
Glyma.11G108700 Glycine max HOM05D002994 ORTHO05D003337 7.0e-21 104.0 71 76.1
ECA233G1668 Erigeron canadensis HOM05D002994 ORTHO05D003337 1.6e-20 102.8 80 68.8
CANSAT01G0680 Cannabis sativa HOM05D002994 ORTHO05D003337 2.0e-20 102.4 70 80.0
Haze_05231 Corylus avellana HOM05D002994 ORTHO05D003337 2.0e-20 102.4 108 59.3
HPP92_021426 Vanilla planifolia HOM05D002994 ORTHO05D003337 2.7e-20 102.1 79 67.1
HanXRQChr05g0139071 Helianthus annuus HOM05D002994 ORTHO05D003337 3.5e-20 101.7 79 69.6
vmacro11037 Vaccinium macrocarpon HOM05D002994 ORTHO05D003337 4.5e-20 101.3 85 67.1
Actinidia29397 Actinidia chinensis HOM05D002994 ORTHO05D003337 5.9e-20 100.9 76 71.1
Nn1g07964 Nelumbo nucifera HOM05D002994 ORTHO05D003337 7.8e-20 100.5 70 75.7
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.0e-19 100.1 81 66.7
EL10Ac4g09801 Beta vulgaris HOM05D002994 ORTHO05D003337 1.3e-19 99.8 73 71.2
Psat7g170080 Pisum sativum HOM05D002994 ORTHO05D003337 1.7e-19 99.4 86 64.0
Sc09g0001740 Simmondsia chinensis HOM05D002994 ORTHO05D003337 1.7e-19 99.4 83 67.5
ClCG07G000990 Citrullus lanatus HOM05D002994 ORTHO05D003337 4.3e-18 94.7 82 68.3
Hund07151 Selenicereus undatus HOM05D002994 ORTHO05D003337 9.5e-18 93.6 73 67.1
Lsat_1_v5_gn_8_3301 Lactuca sativa HOM05D002994 ORTHO05D003337 5.8e-15 84.3 70 65.7
TAR633G1434 Trochodendron aralioides HOM05D002994 ORTHO05D003337 2.9e-14 82.0 52 84.6
VMungo1127G1567 Vigna mungo HOM05D002994 ORTHO05D003337 6.4e-14 80.9 135 40.7
Mapoly0132s0020 Marchantia polymorpha HOM05D002994 ORTHO05D003337 9.2e-13 77.0 99 45.5
SMO228G0152 Selaginella moellendorffii HOM05D002994 ORTHO05D003337 1.0e-11 73.6 73 53.4
COL.COLO4_20548 Corchorus olitorius HOM05D002861 ORTHO05D003104 3.0e-11 72.0 81 55.6
SEGI_02150 Sequoiadendron giganteum HOM05D002994 ORTHO05D003337 6.6e-11 70.9 83 47.0
AagrBONN_evm.TU.Sc2ySwM_117.294 Anthoceros agrestis HOM05D002994 ORTHO05D003337 2.8e-09 65.5 67 52.2
Eucgr.H04542 Eucalyptus grandis HOM05D002994 ORTHO05D003337 6.2e-09 64.3 91 47.3
CBR_g41090 Chara braunii HOM05D002994 ORTHO05D003337 1.4e-08 63.2 68 44.1
SGA_v2.0_scaffold62G21477 Striga asiatica HOM05D002994 ORTHO05D003337 2.2e-06 55.8 78 48.7
SalBow1G2572 Salvia bowleyana HOM05D002994 ORTHO05D003337 3.7e-06 55.1 69 52.2
THA.LOC104821131 Tarenaya hassleriana HOM05D002994 ORTHO05D003337 4.9e-06 54.7 37 78.4


User provided reference genes

Program Settings