Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 3.2e-35 151.4 86 100.0
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.0e-29 132.1 86 90.7
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 1.0e-28 129.8 88 88.6
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.7e-26 120.9 86 82.6
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.0e-25 117.9 86 81.4
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 8.8e-25 116.7 87 80.5
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 7.5e-24 113.6 82 81.7
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.8e-23 111.7 81 79.0
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 2.9e-20 101.7 110 63.6
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.1e-19 99.8 86 68.6
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 4.2e-19 97.8 78 73.1
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 1.6e-18 95.9 107 63.6
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 1.4e-17 92.8 86 67.4
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 3.0e-17 91.7 86 65.1
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 4.0e-17 91.3 107 60.7
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 4.0e-17 91.3 86 62.8
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 5.2e-17 90.9 86 65.1
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 1.2e-16 89.7 86 64.0
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.0e-16 89.0 86 62.8
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 5.4e-14 80.9 82 61.0
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 1.2e-13 79.7 82 59.8
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 1.6e-13 79.3 83 55.4
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 7.7e-13 77.0 99 53.5
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 1.3e-12 76.3 81 56.8
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 1.3e-12 76.3 81 56.8
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 1.7e-12 75.9 86 51.2
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 2.3e-12 75.5 61 72.1
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 3.8e-12 74.7 101 51.5
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 5.0e-12 74.3 90 50.0
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.9e-11 72.4 86 48.8
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 3.3e-11 71.6 86 53.5
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 3.3e-11 71.6 76 53.9
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 4.2e-11 71.2 85 52.9
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 4.2e-11 71.2 91 54.9
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 5.5e-11 70.9 88 48.9
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 5.5e-11 70.9 90 50.0
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 5.5e-11 70.9 86 47.7
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 7.2e-11 70.5 90 47.8
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 7.2e-11 70.5 87 54.0
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 9.5e-11 70.1 86 50.0
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 9.5e-11 70.1 93 51.6
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 1.2e-10 69.7 83 50.6
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 1.6e-10 69.3 92 52.2
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 2.1e-10 68.9 81 53.1
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 4.7e-10 67.8 77 55.8
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 6.1e-10 67.4 90 47.8
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 8.0e-10 67.0 91 54.9
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 8.0e-10 67.0 96 47.9
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 1.0e-09 66.6 91 50.5
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 1.4e-09 66.2 102 49.0
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 1.4e-09 66.2 76 56.6
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 1.4e-09 66.2 97 49.5
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 1.8e-09 65.9 81 46.9
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 1.8e-09 65.9 81 51.9
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 2.3e-09 65.5 45 68.9
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 2.3e-09 65.5 86 51.2
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 2.3e-09 65.5 93 45.2
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 2.3e-09 65.5 78 52.6
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 3.0e-09 65.1 102 49.0
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 4.0e-09 64.7 90 48.9
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 4.0e-09 64.7 90 48.9
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 4.0e-09 64.7 86 47.7
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 5.2e-09 64.3 79 53.2
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 5.2e-09 64.3 81 48.1
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 6.8e-09 63.9 86 44.2
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 6.8e-09 63.9 57 63.2
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 6.8e-09 63.9 94 47.9
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 1.2e-08 63.2 83 45.8
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 1.2e-08 63.2 88 46.6
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 1.5e-08 62.8 69 50.7
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 1.5e-08 62.8 106 41.5
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 1.5e-08 62.8 87 48.3
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 2.0e-08 62.4 70 54.3
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 2.0e-08 62.4 65 52.3
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 2.6e-08 62.0 73 52.1
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 2.6e-08 62.0 73 52.1
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 2.6e-08 62.0 73 52.1
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.6e-08 62.0 90 47.8
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.6e-08 62.0 90 47.8
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 3.4e-08 61.6 72 51.4
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 3.4e-08 61.6 72 51.4
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 3.4e-08 61.6 72 51.4
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 3.4e-08 61.6 38 76.3
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 4.4e-08 61.2 71 52.1
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 4.4e-08 61.2 100 44.0
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 5.7e-08 60.8 84 46.4
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 7.5e-08 60.5 72 50.0
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.8e-08 60.1 85 42.4
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 1.3e-07 59.7 72 50.0
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 2.2e-07 58.9 45 64.4
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 2.2e-07 58.9 57 57.9
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 2.2e-07 58.9 86 41.9
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 2.2e-07 58.9 92 42.4
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 2.8e-07 58.5 71 50.7
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 2.8e-07 58.5 85 40.0
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 2.8e-07 58.5 74 50.0
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 3.7e-07 58.2 59 52.5
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 3.7e-07 58.2 50 62.0
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 4.9e-07 57.8 94 46.8
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 4.9e-07 57.8 83 45.8
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 6.3e-07 57.4 47 57.4
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 8.3e-07 57.0 85 44.7
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 1.1e-06 56.6 59 50.8
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 1.1e-06 56.6 59 50.8
MBI02_g07020_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 3.1e-06 55.1 86 46.5
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 3.1e-06 55.1 59 49.2
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 4.1e-06 54.7 84 46.4
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 5.4e-06 54.3 83 43.4
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 5.4e-06 54.3 85 45.9
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 9.2e-06 53.5 72 45.8


User provided reference genes

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