Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 0.0e+00 1078.9 542 100.0
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 8.0e-281 969.9 542 90.6
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 4.4e-279 964.1 542 89.1
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 3.7e-278 961.1 547 89.8
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 4.7e-257 891.0 541 83.9
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 8.1e-201 704.1 542 70.3
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.3e-185 653.7 556 61.0
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 6.3e-185 651.4 371 88.4
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 2.4e-184 649.4 564 60.3
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 2.5e-181 639.4 601 56.2
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 1.0e-179 634.0 638 54.1
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 2.5e-178 629.4 545 59.6
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 4.3e-178 628.6 567 58.2
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.1e-176 624.0 539 59.9
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 1.5e-175 620.2 542 59.6
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 1.3e-174 617.1 601 55.2
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 8.5e-174 614.4 615 54.8
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 7.9e-172 607.8 561 56.3
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 3.0e-171 605.9 568 56.9
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 3.9e-171 605.5 538 59.5
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 2.0e-170 603.2 562 55.7
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 2.6e-170 602.8 558 56.5
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 4.4e-170 602.1 566 56.7
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 9.7e-170 600.9 582 55.5
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 1.1e-168 597.4 565 56.5
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 3.1e-168 595.9 560 55.0
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 7.0e-168 594.7 560 55.2
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 1.6e-167 593.6 558 56.5
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 2.0e-167 593.2 547 58.3
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 1.0e-166 590.9 557 56.9
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 1.0e-166 590.9 556 55.0
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 2.2e-166 589.7 554 56.7
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 5.0e-166 588.6 560 55.7
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 6.5e-166 588.2 561 55.8
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 1.5e-165 587.0 566 55.5
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 1.6e-164 583.6 577 54.8
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 4.7e-164 582.0 541 57.1
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 8.0e-164 581.3 579 54.2
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.8e-163 580.1 546 57.1
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 4.0e-163 578.9 568 55.1
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.1e-162 577.4 535 56.8
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.1e-162 577.4 564 55.3
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 2.0e-162 576.6 535 56.6
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 7.5e-162 574.7 537 57.2
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 3.7e-161 572.4 540 55.6
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 6.3e-161 571.6 557 53.7
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 1.4e-160 570.5 539 55.1
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 2.0e-159 566.6 538 55.4
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 4.5e-159 565.5 543 55.2
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 7.7e-159 564.7 539 55.7
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 2.2e-158 563.1 535 55.3
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 3.8e-158 562.4 555 54.2
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 2.5e-157 559.7 553 54.6
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 2.7e-156 556.2 542 53.5
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 2.3e-155 553.1 603 51.6
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.3e-155 553.1 537 53.1
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 5.2e-155 552.0 578 52.4
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 8.8e-155 551.2 602 52.0
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 1.3e-153 547.4 563 53.5
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 1.3e-150 537.3 584 50.9
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 3.2e-149 532.7 586 49.3
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 1.7e-145 520.4 567 48.9
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.9e-142 509.6 501 52.5
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 3.8e-142 509.2 573 49.4
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 1.9e-141 506.9 566 50.4
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.2e-140 504.2 508 52.8
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 3.0e-139 499.6 509 53.4
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 8.3e-137 491.5 518 51.7
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 1.4e-136 490.7 495 53.7
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 3.2e-136 489.6 452 57.3
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.2e-135 487.6 525 52.0
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 7.3e-133 478.4 421 58.2
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 5.2e-131 472.2 549 49.5
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 1.7e-129 467.2 562 47.7
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 5.0e-126 455.7 494 49.2
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 2.1e-119 433.7 340 62.4
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 2.0e-114 417.2 506 46.6
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 7.1e-112 408.7 562 42.5
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.2e-106 391.3 450 47.8
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 4.3e-101 372.9 596 38.1
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 9.0e-99 365.2 531 40.9
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 2.0e-98 364.0 370 55.1
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 1.8e-91 340.9 285 61.4
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.4e-88 331.3 285 60.4
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 7.1e-88 328.9 428 45.6
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 7.1e-88 328.9 284 59.9
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 4.6e-87 326.2 347 51.9
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 5.8e-82 309.3 396 47.7
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 5.3e-75 286.2 288 55.2
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.5e-69 267.3 218 62.4
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 2.0e-66 257.7 426 39.9
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 5.0e-57 226.5 246 50.4
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 2.0e-53 214.5 241 47.3
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.3e-44 185.3 210 51.9
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 1.9e-40 171.4 185 51.4
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 5.5e-40 169.9 123 63.4
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 7.5e-37 159.5 192 47.9
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 7.5e-37 159.5 192 47.9
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 3.5e-34 150.6 117 55.6
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 5.9e-34 149.8 194 46.4
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 1.7e-33 148.3 203 44.3
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 3.8e-33 147.1 100 65.0
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.9e-32 144.8 170 50.6
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 9.2e-27 125.9 146 51.4
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 8.0e-23 112.8 127 50.4
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 4.9e-12 77.0 89 50.6
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 1.7e-09 68.6 132 33.3
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 6.6e-09 66.6 316 23.1


User provided reference genes

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