Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 9.3e-198 693.3 352 100.0
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 8.8e-156 553.9 310 91.3
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 4.9e-130 468.4 258 93.4
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 4.1e-129 465.3 310 76.8
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 9.2e-129 464.2 310 77.4
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 2.7e-128 462.6 255 92.9
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 2.8e-125 452.6 310 75.2
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 3.6e-125 452.2 310 74.2
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 1.3e-122 443.7 310 71.9
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 6.4e-122 441.4 313 74.8
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 7.1e-121 438.0 311 74.0
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 2.7e-120 436.0 313 73.2
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 2.3e-119 433.0 314 72.0
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 2.3e-119 433.0 325 70.8
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 1.6e-117 426.8 323 70.3
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 2.8e-117 426.0 324 68.8
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 4.7e-117 425.2 313 70.0
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 4.7e-117 425.2 329 69.9
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 1.4e-116 423.7 313 70.0
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 1.8e-116 423.3 321 69.8
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 3.1e-116 422.5 296 72.3
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 6.8e-116 421.4 310 71.0
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 1.2e-115 420.6 321 68.5
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 1.5e-115 420.2 314 70.4
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 2.6e-115 419.5 310 70.6
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 3.4e-115 419.1 321 68.5
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 4.4e-115 418.7 319 69.3
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 5.8e-115 418.3 319 68.7
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 7.6e-115 417.9 327 68.2
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 1.3e-114 417.2 317 69.7
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 4.9e-114 415.2 319 67.7
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 6.4e-114 414.8 312 69.9
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 8.4e-114 414.5 322 66.8
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 8.4e-114 414.5 327 66.1
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 1.9e-113 413.3 325 66.8
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 5.4e-113 411.8 351 64.4
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 9.3e-113 411.0 319 68.0
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 1.2e-112 410.6 320 68.8
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 2.1e-112 409.8 250 80.8
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 1.7e-111 406.8 316 67.7
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 2.3e-111 406.4 324 67.0
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 3.9e-111 405.6 321 68.5
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 5.1e-111 405.2 325 67.1
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 2.5e-110 402.9 309 66.7
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 4.3e-110 402.1 320 67.8
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 5.6e-110 401.7 320 67.8
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 5.6e-110 401.7 330 63.9
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 3.6e-109 399.1 293 71.3
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 6.2e-109 398.3 329 64.4
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 1.4e-108 397.1 267 76.4
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 3.1e-108 396.0 321 67.0
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 3.1e-108 396.0 322 62.7
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 4.0e-108 395.6 304 67.4
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 2.0e-107 393.3 323 65.9
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.0e-107 393.3 322 66.1
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 5.8e-107 391.7 341 61.3
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 5.8e-107 391.7 321 66.4
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 5.8e-107 391.7 278 71.9
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 7.6e-107 391.3 322 65.5
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 1.3e-106 390.6 327 64.5
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 2.2e-106 389.8 288 69.4
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 6.4e-106 388.3 340 62.6
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 1.9e-105 386.7 260 72.3
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 2.4e-105 386.3 322 64.0
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 4.2e-105 385.6 268 73.9
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 6.0e-104 381.7 303 67.7
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 1.3e-103 380.6 289 68.5
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 3.9e-103 379.0 314 63.4
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 4.3e-102 375.6 317 64.0
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 5.6e-102 375.2 317 64.0
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 5.6e-102 375.2 320 62.2
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 5.6e-102 375.2 323 62.8
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 1.3e-101 374.0 317 64.0
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 2.1e-101 373.2 317 63.7
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 2.8e-101 372.9 317 63.7
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 3.6e-101 372.5 349 60.5
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 4.8e-101 372.1 249 73.5
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 1.1e-100 370.9 325 62.2
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 2.4e-100 369.8 320 62.2
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 3.1e-100 369.4 320 61.9
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 2.0e-99 366.7 317 62.5
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 5.8e-99 365.2 313 63.9
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 1.7e-98 363.6 320 59.4
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 2.2e-98 363.2 307 63.5
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 6.0e-96 355.1 274 66.8
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 1.1e-94 350.9 228 74.6
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 2.4e-92 343.2 333 57.1
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 5.3e-92 342.0 313 60.1
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 9.0e-92 341.3 317 58.0
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 4.1e-84 315.8 237 66.7
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 1.4e-81 307.4 257 61.5
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 3.7e-69 266.2 325 47.1
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 3.7e-69 266.2 272 50.7
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 1.4e-68 264.2 273 51.6
Sopen02g011690 Solanum pennellii HOM05D006535 ORTHO05D008548 5.0e-66 255.8 156 87.2
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 7.2e-65 251.9 266 50.4
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 4.4e-62 242.7 259 56.8
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 2.6e-54 216.9 241 48.1
Solyc02g036310.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 6.1e-40 169.1 135 70.4
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 1.8e-39 167.5 231 45.9
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 1.3e-18 98.2 139 39.6
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 3.1e-15 87.0 58 72.4
RcHm_v2.0_Chr5g0002771 Rosa chinensis HOM05D006535 ORTHO05D008548 9.8e-14 82.0 68 58.8
Carub.0007s3335 Capsella rubella HOM05D006535 ORTHO05D008548 3.7e-13 80.1 135 40.0
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 3.9e-10 70.1 39 82.1
BcaC02g09432 Brassica carinata HOM05D006535 ORTHO05D008548 6.8e-07 59.3 34 76.5
C03p62470 Brassica napus HOM05D006535 ORTHO05D042350 2.0e-06 57.8 149 30.9
BolC3t18504H Brassica oleracea HOM05D006535 ORTHO05D042350 2.0e-06 57.8 149 30.9
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 9.9e-06 55.5 30 83.3
BraA09t38215Z Brassica rapa HOM05D006535 ORTHO05D033081 9.9e-06 55.5 30 83.3


User provided reference genes

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