Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 4.3e-84 314.7 166 100.0
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 6.8e-82 307.4 166 97.0
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.9e-79 299.3 166 94.6
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 4.1e-79 298.1 166 94.6
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 4.1e-79 298.1 166 94.6
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 1.6e-75 286.2 164 90.9
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 2.2e-72 275.8 166 83.7
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 4.9e-72 274.6 166 84.3
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 6.0e-70 267.7 166 81.3
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 3.9e-69 265.0 166 78.3
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 1.5e-68 263.1 166 80.7
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 1.9e-68 262.7 166 80.1
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 1.9e-68 262.7 166 81.3
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 2.5e-68 262.3 166 80.1
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 2.5e-68 262.3 166 80.7
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 3.3e-68 261.9 166 80.7
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 4.3e-68 261.5 166 80.7
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 5.6e-68 261.2 166 81.9
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 7.3e-68 260.8 166 80.7
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 7.3e-68 260.8 166 80.7
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 7.3e-68 260.8 164 79.9
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 9.5e-68 260.4 166 78.9
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.2e-67 260.0 166 78.3
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 1.6e-67 259.6 166 78.3
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 2.1e-67 259.2 166 81.3
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 2.1e-67 259.2 164 79.9
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 4.7e-67 258.1 166 79.5
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 6.2e-67 257.7 166 79.5
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 6.2e-67 257.7 166 79.5
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 1.4e-66 256.5 160 80.0
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 1.8e-66 256.1 166 78.3
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 3.1e-66 255.4 166 78.3
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 8.9e-66 253.8 166 76.5
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 1.2e-65 253.4 166 77.1
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 5.8e-65 251.1 150 82.0
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 1.3e-64 250.0 166 76.5
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 1.7e-64 249.6 166 77.1
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 1.4e-63 246.5 166 78.3
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 1.9e-63 246.1 156 81.4
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 4.1e-63 245.0 166 75.9
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 7.1e-63 244.2 166 72.9
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 7.1e-63 244.2 167 74.9
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 1.6e-62 243.0 167 74.9
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 1.7e-61 239.6 166 75.3
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 6.6e-61 237.7 166 75.3
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 1.5e-60 236.5 149 80.5
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 1.5e-60 236.5 157 77.7
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 4.3e-60 235.0 193 66.3
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 1.6e-59 233.0 152 76.3
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 1.6e-59 233.0 166 71.7
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 4.0e-58 228.4 166 69.9
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 4.0e-58 228.4 146 78.8
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 6.8e-58 227.6 166 69.9
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 8.9e-58 227.3 166 70.5
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 1.2e-57 226.9 166 68.7
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 2.6e-57 225.7 166 69.9
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 5.8e-57 224.6 166 69.3
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 5.8e-57 224.6 166 69.3
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 5.8e-57 224.6 166 69.3
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 7.6e-57 224.2 166 69.3
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 7.6e-57 224.2 166 69.3
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 1.7e-56 223.0 158 71.5
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 4.9e-56 221.5 166 69.9
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 4.9e-56 221.5 166 68.7
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 8.4e-56 220.7 166 68.1
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 1.4e-55 219.9 166 69.3
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 1.9e-55 219.5 164 70.7
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 3.2e-55 218.8 166 68.1
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 4.2e-55 218.4 166 68.1
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 5.4e-55 218.0 166 63.3
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 5.4e-55 218.0 166 68.1
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 5.4e-55 218.0 166 67.5
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 1.2e-54 216.9 166 68.1
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 1.2e-54 216.9 166 68.1
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 6.0e-54 214.5 166 66.9
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 1.0e-53 213.8 167 67.1
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 1.1e-52 210.3 166 66.9
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 1.4e-50 203.4 166 65.1
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 2.6e-49 199.1 167 64.1
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 7.6e-49 197.6 162 63.0
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 1.3e-48 196.8 166 58.4
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 1.4e-47 193.4 162 59.3
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 3.2e-47 192.2 166 62.7
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 6.2e-43 177.9 123 72.4
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 6.9e-42 174.5 107 82.2
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 6.9e-42 174.5 107 82.2
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 1.5e-41 173.3 105 81.9
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 5.8e-41 171.4 105 81.9
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 9.9e-41 170.6 105 81.9
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 4.2e-39 165.2 166 56.6
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 1.2e-38 163.7 105 75.2
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 4.6e-38 161.8 105 81.0
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 3.0e-37 159.1 147 59.2
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 2.0e-33 146.4 160 52.5
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.0e-32 144.1 273 35.9
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 8.4e-32 141.0 144 52.8
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 6.7e-29 131.3 167 46.1
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 3.8e-24 115.5 99 63.6
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 8.4e-24 114.4 119 57.1
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 1.3e-21 107.1 81 70.4
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 1.8e-18 96.7 105 55.2
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 6.9e-18 94.7 61 75.4
CSS0030855 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.7e-14 82.8 45 86.7
CSS0036908 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.7e-14 82.8 45 86.7
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.2e-08 63.2 35 91.4
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 9.4e-07 57.8 33 87.9
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 1.6e-06 57.0 35 82.9


User provided reference genes

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